RNA–Protein interactions for RNA: ENST00000356937.7

CDK11A-202, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 1 (best)

Gene CDK11A, Length 2,275 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-202ENST00000356937 RPL39P62891 51 aaKnown RBP12.61□□□□□ -0.39
CDK11A-202ENST00000356937 TOMM6Q96B49 74 aa12.61□□□□□ -0.39
CDK11A-202ENST00000356937 A6NDN8 102 aa12.6□□□□□ -0.39
CDK11A-202ENST00000356937 DAZ4Q86SG3 579 aaKnown RBP12.6□□□□□ -0.39
CDK11A-202ENST00000356937 IFI27L1Q96BM0 104 aa12.6□□□□□ -0.39
CDK11A-202ENST00000356937 DAZ3Q9NR90 486 aaKnown RBP12.6□□□□□ -0.39
CDK11A-202ENST00000356937 CYSLTR1Q9Y271 337 aa12.6□□□□□ -0.39
CDK11A-202ENST00000356937 K7EP34 96 aa12.6□□□□□ -0.39
CDK11A-202ENST00000356937 C11orf45Q8TAV5 145 aa12.6□□□□□ -0.39
CDK11A-202ENST00000356937 TRAV26-1A0A087WT03 109 aa12.59□□□□□ -0.39
CDK11A-202ENST00000356937 NANOS2P60321 138 aaKnown RBP12.59□□□□□ -0.39
CDK11A-202ENST00000356937 Q6ZTC4 211 aa12.59□□□□□ -0.39
CDK11A-202ENST00000356937 SCGB3A1Q96QR1 104 aa12.59□□□□□ -0.39
CDK11A-202ENST00000356937 VSIG2Q96IQ7 327 aa12.59□□□□□ -0.39
CDK11A-202ENST00000356937 B9D2Q9BPU9 175 aa12.59□□□□□ -0.39
CDK11A-202ENST00000356937 C20orf203Q8NBC4 194 aa12.58□□□□□ -0.4
CDK11A-202ENST00000356937 OR5A1Q8NGJ0 315 aa12.58□□□□□ -0.4
CDK11A-202ENST00000356937 HUWE1Q7Z6Z7 4374 aaKnown RBP12.57□□□□□ -0.4
CDK11A-202ENST00000356937 COL7A1Q02388 2944 aa12.57□□□□□ -0.4
CDK11A-202ENST00000356937 A0A096LPF7 62 aa12.57□□□□□ -0.4
CDK11A-202ENST00000356937 ATP5LO75964 103 aa12.57□□□□□ -0.4
CDK11A-202ENST00000356937 FGF6P10767 208 aa12.57□□□□□ -0.4
CDK11A-202ENST00000356937 CHCHD7Q9BUK0 85 aa12.57□□□□□ -0.4
CDK11A-202ENST00000356937 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.56□□□□□ -0.4
CDK11A-202ENST00000356937 LINC00694P0DN24 101 aa12.56□□□□□ -0.4
CDK11A-202ENST00000356937 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.55□□□□□ -0.4
CDK11A-202ENST00000356937 IGKV2-29A2NJV5 120 aaPredicted RBP12.55□□□□□ -0.4
CDK11A-202ENST00000356937 SIVA1O15304 175 aa12.55□□□□□ -0.4
CDK11A-202ENST00000356937 PRSS1P07477 247 aa12.55□□□□□ -0.4
CDK11A-202ENST00000356937 NTM-AS1Q6ZSK4 140 aa12.55□□□□□ -0.4
CDK11A-202ENST00000356937 ATP6V0E2Q8NHE4 81 aa12.55□□□□□ -0.4
CDK11A-202ENST00000356937 SCGB1A1P11684 91 aa12.54□□□□□ -0.4
CDK11A-202ENST00000356937 HSD52Q0P140 79 aa12.54□□□□□ -0.4
CDK11A-202ENST00000356937 BOD1L2Q8IYS8 172 aa12.54□□□□□ -0.4
CDK11A-202ENST00000356937 MEGF8Q7Z7M0 2845 aa12.53□□□□□ -0.4
CDK11A-202ENST00000356937 LINC01549A6NIU2 74 aa12.53□□□□□ -0.4
CDK11A-202ENST00000356937 IGIPA6NJ69 53 aa12.53□□□□□ -0.4
CDK11A-202ENST00000356937 H3BUT2 72 aa12.53□□□□□ -0.4
CDK11A-202ENST00000356937 GTSF1LQ9H1H1 148 aa12.52□□□□□ -0.41
CDK11A-202ENST00000356937 CEMP1Q6PRD7 247 aaPredicted RBP12.51□□□□□ -0.41
CDK11A-202ENST00000356937 OPRPNQ99935 248 aaPredicted RBP12.51□□□□□ -0.41
CDK11A-202ENST00000356937 DNAH9Q9NYC9 4486 aa12.51□□□□□ -0.41
CDK11A-202ENST00000356937 DEFB131BA0A096LNP1 70 aa12.51□□□□□ -0.41
CDK11A-202ENST00000356937 A0A1W2PPM0 123 aa12.5□□□□□ -0.41
CDK11A-202ENST00000356937 LGALS9CQ6DKI2 356 aa12.5□□□□□ -0.41
CDK11A-202ENST00000356937 BAALCQ8WXS3 180 aa12.5□□□□□ -0.41
CDK11A-202ENST00000356937 TIMM17AQ99595 171 aa12.5□□□□□ -0.41
CDK11A-202ENST00000356937 ICOSQ9Y6W8 199 aa12.5□□□□□ -0.41
CDK11A-202ENST00000356937 STAB2Q8WWQ8 2551 aa12.5□□□□□ -0.41
CDK11A-202ENST00000356937 TRBV25-1A0A075B6N4 114 aa12.5□□□□□ -0.41
CDK11A-202ENST00000356937 MRPL23Q16540 153 aaKnown RBP12.5□□□□□ -0.41
CDK11A-202ENST00000356937 TMEM141Q96I45 108 aa12.5□□□□□ -0.41
CDK11A-202ENST00000356937 TRBV6-8A0A0A6YYG3 113 aa12.49□□□□□ -0.41
CDK11A-202ENST00000356937 TMEM243Q9BU79 118 aa12.49□□□□□ -0.41
CDK11A-202ENST00000356937 ZC2HC1BQ5TFG8 222 aa12.49□□□□□ -0.41
CDK11A-202ENST00000356937 SPCS1Q9Y6A9 102 aa12.49□□□□□ -0.41
CDK11A-202ENST00000356937 UBE2D4Q9Y2X8 147 aa12.48□□□□□ -0.41
CDK11A-202ENST00000356937 UBE2L6O14933 153 aa12.48□□□□□ -0.41
CDK11A-202ENST00000356937 FABP2P12104 132 aa12.47□□□□□ -0.41
CDK11A-202ENST00000356937 ODF1Q14990 250 aa12.47□□□□□ -0.41
CDK11A-202ENST00000356937 PYGO1Q9Y3Y4 419 aa12.47□□□□□ -0.41
CDK11A-202ENST00000356937 IGLV4-3A0A075B6K6 122 aa12.46□□□□□ -0.41
CDK11A-202ENST00000356937 CHCHD5Q9BSY4 110 aa12.46□□□□□ -0.41
CDK11A-202ENST00000356937 PRSS29PA6NIE9 313 aa12.46□□□□□ -0.42
CDK11A-202ENST00000356937 NHLRC4P0CG21 123 aaPredicted RBP12.46□□□□□ -0.42
CDK11A-202ENST00000356937 RNASE13Q5GAN3 156 aaKnown RBP12.46□□□□□ -0.42
CDK11A-202ENST00000356937 DGAT2L7PQ6IED9 249 aa12.46□□□□□ -0.42
CDK11A-202ENST00000356937 SPANXA1Q9NS26 97 aa12.46□□□□□ -0.42
CDK11A-202ENST00000356937 PRKDCP78527 4128 aaKnown RBP12.46□□□□□ -0.42
CDK11A-202ENST00000356937 A0A087WX48 190 aa12.45□□□□□ -0.42
CDK11A-202ENST00000356937 TRAV10A0A0B4J240 114 aa12.45□□□□□ -0.42
CDK11A-202ENST00000356937 GAGE6Q13070 117 aa12.45□□□□□ -0.42
CDK11A-202ENST00000356937 TRAV12-1A0A0B4J245 112 aa12.45□□□□□ -0.42
CDK11A-202ENST00000356937 MRPL35Q9NZE8 188 aaKnown RBP12.45□□□□□ -0.42
CDK11A-202ENST00000356937 PMVKQ15126 192 aa12.44□□□□□ -0.42
CDK11A-202ENST00000356937 FAM104AQ969W3 186 aa12.44□□□□□ -0.42
CDK11A-202ENST00000356937 VCX2Q9H322 139 aa12.44□□□□□ -0.42
CDK11A-202ENST00000356937 H3BNG1 76 aa12.44□□□□□ -0.42
CDK11A-202ENST00000356937 SH2D6Q7Z4S9 175 aa12.44□□□□□ -0.42
CDK11A-202ENST00000356937 Q6ZUT4 128 aa12.43□□□□□ -0.42
CDK11A-202ENST00000356937 SIGMAR1Q99720 223 aa12.43□□□□□ -0.42
CDK11A-202ENST00000356937 SMIM13P0DJ93 91 aa12.42□□□□□ -0.42
CDK11A-202ENST00000356937 PAPPA-AS1Q5QFB9 102 aa12.42□□□□□ -0.42
CDK11A-202ENST00000356937 NAA38Q9BRA0 125 aaKnown RBP12.42□□□□□ -0.42
CDK11A-202ENST00000356937 TIMM21Q9BVV7 248 aa12.42□□□□□ -0.42
CDK11A-202ENST00000356937 RAB37Q96AX2 223 aa12.41□□□□□ -0.42
CDK11A-202ENST00000356937 HIGD1BQ9P298 99 aa12.41□□□□□ -0.42
CDK11A-202ENST00000356937 A0A1B0GV72 72 aa12.41□□□□□ -0.42
CDK11A-202ENST00000356937 TMEM262E9PQX1 116 aa12.41□□□□□ -0.42
CDK11A-202ENST00000356937 F8VRH5 84 aa12.41□□□□□ -0.42
CDK11A-202ENST00000356937 H7C423 109 aa12.41□□□□□ -0.42
CDK11A-202ENST00000356937 DPM2O94777 84 aa12.4□□□□□ -0.42
CDK11A-202ENST00000356937 IGKCP01834 107 aa12.4□□□□□ -0.42
CDK11A-202ENST00000356937 SMAGPQ0VAQ4 97 aa12.4□□□□□ -0.42
CDK11A-202ENST00000356937 TMEM101Q96IK0 257 aa12.4□□□□□ -0.42
CDK11A-202ENST00000356937 LYPD5Q6UWN5 251 aa12.4□□□□□ -0.42
CDK11A-202ENST00000356937 AMELXQ99217 191 aa12.4□□□□□ -0.42
CDK11A-202ENST00000356937 RPL24P83731 157 aaKnown RBP12.39□□□□□ -0.43
CDK11A-202ENST00000356937 CSDC2Q9Y534 153 aaKnown RBP12.39□□□□□ -0.43
CDK11A-202ENST00000356937 J3QR89 54 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 99.3 ms