RNA–Protein interactions for RNA: ENST00000356660.8

BDNF-202, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,018 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-202ENST00000356660 C3orf22Q8N5N4 141 aa9.4□□□□□ -0.91
BDNF-202ENST00000356660 PSMG3-AS1Q96PY0 264 aa9.4□□□□□ -0.91
BDNF-202ENST00000356660 COL12A1Q99715 3063 aa9.39□□□□□ -0.91
BDNF-202ENST00000356660 NDUFC2O95298 119 aa9.39□□□□□ -0.91
BDNF-202ENST00000356660 CRYGDP07320 174 aa9.39□□□□□ -0.91
BDNF-202ENST00000356660 C10orf105Q8TEF2 133 aa9.39□□□□□ -0.91
BDNF-202ENST00000356660 COPS9Q8WXC6 57 aa9.39□□□□□ -0.91
BDNF-202ENST00000356660 C6orf226Q5I0X4 101 aa9.39□□□□□ -0.91
BDNF-202ENST00000356660 C20orf203Q8NBC4 194 aa9.39□□□□□ -0.91
BDNF-202ENST00000356660 IGIPA6NJ69 53 aa9.38□□□□□ -0.91
BDNF-202ENST00000356660 RHOHQ15669 191 aa9.38□□□□□ -0.91
BDNF-202ENST00000356660 SIRPDQ9H106 197 aa9.38□□□□□ -0.91
BDNF-202ENST00000356660 A0A1B0GX51 115 aa9.38□□□□□ -0.91
BDNF-202ENST00000356660 RBM3P98179 157 aaKnown RBP9.38□□□□□ -0.91
BDNF-202ENST00000356660 GPHB5Q86YW7 130 aa9.38□□□□□ -0.91
BDNF-202ENST00000356660 POLR2KP53803 58 aaKnown RBP9.37□□□□□ -0.91
BDNF-202ENST00000356660 FBXL19-AS1Q494R0 122 aa9.37□□□□□ -0.91
BDNF-202ENST00000356660 Q8N6K4 173 aa9.37□□□□□ -0.91
BDNF-202ENST00000356660 RNF152Q8N8N0 203 aa9.37□□□□□ -0.91
BDNF-202ENST00000356660 LINC01546A6NGU7 62 aa9.37□□□□□ -0.91
BDNF-202ENST00000356660 TSHBP01222 138 aa9.37□□□□□ -0.91
BDNF-202ENST00000356660 PFN2P35080 140 aa9.37□□□□□ -0.91
BDNF-202ENST00000356660 DSCR8Q96T75 97 aa9.37□□□□□ -0.91
BDNF-202ENST00000356660 TNRC18O15417 2968 aaPredicted RBP9.36□□□□□ -0.91
BDNF-202ENST00000356660 A0A0B4J2C4 111 aa9.36□□□□□ -0.91
BDNF-202ENST00000356660 TMEM223A0PJW6 202 aa9.36□□□□□ -0.91
BDNF-202ENST00000356660 Q9H8V8 135 aa9.36□□□□□ -0.91
BDNF-202ENST00000356660 FAM236DA0A1B0GTK5 79 aa9.36□□□□□ -0.91
BDNF-202ENST00000356660 FAM236CP0DP71 79 aa9.36□□□□□ -0.91
BDNF-202ENST00000356660 ZZEF1O43149 2961 aa9.36□□□□□ -0.91
BDNF-202ENST00000356660 ELANEP08246 267 aa9.36□□□□□ -0.91
BDNF-202ENST00000356660 LGALS9O00182 355 aa9.35□□□□□ -0.91
BDNF-202ENST00000356660 EBI3Q14213 229 aa9.35□□□□□ -0.91
BDNF-202ENST00000356660 TMEM263Q8WUH6 116 aaKnown RBP9.35□□□□□ -0.91
BDNF-202ENST00000356660 EDN2P20800 178 aa9.35□□□□□ -0.91
BDNF-202ENST00000356660 LRBAP50851 2863 aa9.35□□□□□ -0.91
BDNF-202ENST00000356660 IGLV4-3A0A075B6K6 122 aa9.35□□□□□ -0.91
BDNF-202ENST00000356660 PROK1P58294 105 aa9.35□□□□□ -0.91
BDNF-202ENST00000356660 IGHV4OR15-8A0A075B7B6 117 aa9.34□□□□□ -0.91
BDNF-202ENST00000356660 A0A087WW49 117 aa9.34□□□□□ -0.91
BDNF-202ENST00000356660 MED14OSP0DP75 135 aa9.34□□□□□ -0.91
BDNF-202ENST00000356660 Q6Q795 121 aa9.34□□□□□ -0.91
BDNF-202ENST00000356660 CLPSL2Q6UWE3 100 aa9.34□□□□□ -0.91
BDNF-202ENST00000356660 U3KQE9 123 aa9.34□□□□□ -0.91
BDNF-202ENST00000356660 PRM2P04554 102 aa9.34□□□□□ -0.92
BDNF-202ENST00000356660 C10orf99Q6UWK7 81 aa9.34□□□□□ -0.92
BDNF-202ENST00000356660 M0QY20 66 aa9.33□□□□□ -0.92
BDNF-202ENST00000356660 NXPH4O95158 308 aa9.33□□□□□ -0.92
BDNF-202ENST00000356660 BAALC-AS2P0C853 105 aa9.33□□□□□ -0.92
BDNF-202ENST00000356660 C4orf26Q17RF5 130 aa9.33□□□□□ -0.92
BDNF-202ENST00000356660 NOP10Q9NPE3 64 aaKnown RBP9.33□□□□□ -0.92
BDNF-202ENST00000356660 RELNP78509 3460 aa9.33□□□□□ -0.92
BDNF-202ENST00000356660 TRBV27A0A0K0K1C4 114 aa9.33□□□□□ -0.92
BDNF-202ENST00000356660 H3BT86 120 aa9.33□□□□□ -0.92
BDNF-202ENST00000356660 TMEM243Q9BU79 118 aa9.33□□□□□ -0.92
BDNF-202ENST00000356660 SPANXDQ9BXN6 97 aa9.33□□□□□ -0.92
BDNF-202ENST00000356660 AKAP13Q12802 2813 aa9.32□□□□□ -0.92
BDNF-202ENST00000356660 IGHV1-58A0A0C4DH39 117 aa9.32□□□□□ -0.92
BDNF-202ENST00000356660 ATOX1O00244 68 aa9.32□□□□□ -0.92
BDNF-202ENST00000356660 ESM1Q9NQ30 184 aa9.32□□□□□ -0.92
BDNF-202ENST00000356660 ANKRD17O75179 2603 aaKnown RBP9.32□□□□□ -0.92
BDNF-202ENST00000356660 CRPP02741 224 aa9.32□□□□□ -0.92
BDNF-202ENST00000356660 DEFB121Q5J5C9 76 aa9.32□□□□□ -0.92
BDNF-202ENST00000356660 H7C423 109 aa9.31□□□□□ -0.92
BDNF-202ENST00000356660 CCL24O00175 119 aa9.31□□□□□ -0.92
BDNF-202ENST00000356660 IGHG2P01859 326 aa9.31□□□□□ -0.92
BDNF-202ENST00000356660 ZNF575Q86XF7 245 aa9.31□□□□□ -0.92
BDNF-202ENST00000356660 TMEM86BQ8N661 226 aa9.31□□□□□ -0.92
BDNF-202ENST00000356660 RBMY1BA6NDE4 496 aaKnown RBP9.31□□□□□ -0.92
BDNF-202ENST00000356660 RBMY1EA6NEQ0 496 aaKnown RBP9.31□□□□□ -0.92
BDNF-202ENST00000356660 RBMY1DP0C7P1 496 aaKnown RBP9.31□□□□□ -0.92
BDNF-202ENST00000356660 RBMY1A1P0DJD3 496 aaKnown RBP9.31□□□□□ -0.92
BDNF-202ENST00000356660 RBMY1CP0DJD4 496 aa9.31□□□□□ -0.92
BDNF-202ENST00000356660 HIST2H2BCQ6DN03 193 aa9.31□□□□□ -0.92
BDNF-202ENST00000356660 TRBV30A0A0K0K1B3 111 aa9.31□□□□□ -0.92
BDNF-202ENST00000356660 TMEM61Q8N0U2 210 aa9.3□□□□□ -0.92
BDNF-202ENST00000356660 CDKN2A-AS1Q9UH64 79 aa9.3□□□□□ -0.92
BDNF-202ENST00000356660 MIAQ16674 131 aa9.3□□□□□ -0.92
BDNF-202ENST00000356660 DEFB113Q30KQ7 82 aa9.3□□□□□ -0.92
BDNF-202ENST00000356660 Q9HAA7 133 aa9.3□□□□□ -0.92
BDNF-202ENST00000356660 F8WDY8 70 aa9.29□□□□□ -0.92
BDNF-202ENST00000356660 MRPL55Q7Z7F7 128 aaKnown RBP9.29□□□□□ -0.92
BDNF-202ENST00000356660 CSMD1Q96PZ7 3565 aa9.29□□□□□ -0.92
BDNF-202ENST00000356660 ADAMTSL4-AS1Q5T5F5 129 aa9.29□□□□□ -0.92
BDNF-202ENST00000356660 ASH1LQ9NR48 2969 aaKnown RBP9.29□□□□□ -0.92
BDNF-202ENST00000356660 IGKV3D-7A0A0C4DH55 119 aa9.29□□□□□ -0.92
BDNF-202ENST00000356660 PRO0628Q9UI54 55 aa9.29□□□□□ -0.92
BDNF-202ENST00000356660 H3BUA1 57 aa9.28□□□□□ -0.92
BDNF-202ENST00000356660 MUC4Q99102 2169 aa9.28□□□□□ -0.92
BDNF-202ENST00000356660 J3QKU1 62 aa9.28□□□□□ -0.92
BDNF-202ENST00000356660 A0A0J9YX75 114 aa9.28□□□□□ -0.92
BDNF-202ENST00000356660 CMC4P56277 68 aaPredicted RBP9.27□□□□□ -0.93
BDNF-202ENST00000356660 C5orf38Q86SI9 138 aa9.27□□□□□ -0.93
BDNF-202ENST00000356660 VSIG2Q96IQ7 327 aa9.27□□□□□ -0.93
BDNF-202ENST00000356660 DAZ2Q13117 558 aaKnown RBP9.26□□□□□ -0.93
BDNF-202ENST00000356660 DAZ4Q86SG3 579 aaKnown RBP9.26□□□□□ -0.93
BDNF-202ENST00000356660 POM121L12Q8N7R1 296 aa9.26□□□□□ -0.93
BDNF-202ENST00000356660 ODF3Q96PU9 254 aa9.26□□□□□ -0.93
BDNF-202ENST00000356660 DAZ3Q9NR90 486 aaKnown RBP9.26□□□□□ -0.93
BDNF-202ENST00000356660 KLLNB2CW77 178 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms