RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 AKAP9Q99996 3911 aa7.36□□□□□ -1.23
PTPRA-203ENST00000356147 PKD1L2Q7Z442 2459 aa7.36□□□□□ -1.23
PTPRA-203ENST00000356147 LST1O00453 97 aa7.36□□□□□ -1.23
PTPRA-203ENST00000356147 MEIG1Q5JSS6 88 aa7.36□□□□□ -1.23
PTPRA-203ENST00000356147 CCL19Q99731 98 aa7.36□□□□□ -1.23
PTPRA-203ENST00000356147 CITED2Q99967 270 aaPredicted RBP7.36□□□□□ -1.23
PTPRA-203ENST00000356147 ANKRD17O75179 2603 aaKnown RBP7.36□□□□□ -1.23
PTPRA-203ENST00000356147 TEX15Q9BXT5 2789 aa7.36□□□□□ -1.23
PTPRA-203ENST00000356147 ZFYVE26Q68DK2 2539 aa7.35□□□□□ -1.23
PTPRA-203ENST00000356147 TRAV13-1A0A0B4J241 112 aa7.35□□□□□ -1.23
PTPRA-203ENST00000356147 MSMBP08118 114 aa7.35□□□□□ -1.23
PTPRA-203ENST00000356147 TMEM101Q96IK0 257 aa7.35□□□□□ -1.23
PTPRA-203ENST00000356147 IGHV3-53P01767 116 aa7.35□□□□□ -1.23
PTPRA-203ENST00000356147 C10orf105Q8TEF2 133 aa7.35□□□□□ -1.23
PTPRA-203ENST00000356147 SPANXDQ9BXN6 97 aa7.35□□□□□ -1.23
PTPRA-203ENST00000356147 SPANXCQ9NY87 97 aa7.35□□□□□ -1.23
PTPRA-203ENST00000356147 BRI3O95415 125 aa7.34□□□□□ -1.23
PTPRA-203ENST00000356147 PYGO1Q9Y3Y4 419 aa7.34□□□□□ -1.23
PTPRA-203ENST00000356147 LRRK2Q5S007 2527 aa7.34□□□□□ -1.23
PTPRA-203ENST00000356147 M0QXV9 152 aa7.34□□□□□ -1.23
PTPRA-203ENST00000356147 LINC00694P0DN24 101 aa7.34□□□□□ -1.23
PTPRA-203ENST00000356147 HERV-K104P63124 156 aa7.34□□□□□ -1.23
PTPRA-203ENST00000356147 KHDC1LQ5JSQ8 128 aa7.34□□□□□ -1.23
PTPRA-203ENST00000356147 LINC01587Q99440 93 aa7.34□□□□□ -1.23
PTPRA-203ENST00000356147 TINCRA0A1B0GVN0 87 aa7.34□□□□□ -1.24
PTPRA-203ENST00000356147 RS1O15537 224 aa7.34□□□□□ -1.24
PTPRA-203ENST00000356147 SOSTDC1Q6X4U4 206 aa7.34□□□□□ -1.24
PTPRA-203ENST00000356147 H3BT86 120 aa7.33□□□□□ -1.24
PTPRA-203ENST00000356147 PIK3CD-AS1Q5SR53 167 aa7.33□□□□□ -1.24
PTPRA-203ENST00000356147 SHISA2Q6UWI4 295 aa7.33□□□□□ -1.24
PTPRA-203ENST00000356147 FAM236AA0A1B0GUQ0 79 aa7.32□□□□□ -1.24
PTPRA-203ENST00000356147 FAM236BA0A1B0GV22 79 aa7.32□□□□□ -1.24
PTPRA-203ENST00000356147 LINC00308Q8TCZ7 52 aa7.32□□□□□ -1.24
PTPRA-203ENST00000356147 UBE2E2Q96LR5 201 aa7.32□□□□□ -1.24
PTPRA-203ENST00000356147 IGKV3OR2-268A0A0C4DH90 116 aa7.32□□□□□ -1.24
PTPRA-203ENST00000356147 SMCR5Q8TEV8 140 aa7.32□□□□□ -1.24
PTPRA-203ENST00000356147 XCL2Q9UBD3 114 aa7.32□□□□□ -1.24
PTPRA-203ENST00000356147 CCDC168Q8NDH2 2452 aa7.32□□□□□ -1.24
PTPRA-203ENST00000356147 Q9HAA7 133 aa7.32□□□□□ -1.24
PTPRA-203ENST00000356147 FN1P02751 2386 aaKnown RBP7.31□□□□□ -1.24
PTPRA-203ENST00000356147 PRIMA1Q86XR5 153 aa7.31□□□□□ -1.24
PTPRA-203ENST00000356147 DOPEY1Q5JWR5 2465 aa7.3□□□□□ -1.24
PTPRA-203ENST00000356147 FAM218AQ96MZ4 157 aa7.3□□□□□ -1.24
PTPRA-203ENST00000356147 SPANXA1Q9NS26 97 aa7.3□□□□□ -1.24
PTPRA-203ENST00000356147 DAZ2Q13117 558 aaKnown RBP7.3□□□□□ -1.24
PTPRA-203ENST00000356147 LINC00242Q5T6M2 205 aa7.3□□□□□ -1.24
PTPRA-203ENST00000356147 Q6Q795 121 aa7.3□□□□□ -1.24
PTPRA-203ENST00000356147 DAZ4Q86SG3 579 aaKnown RBP7.3□□□□□ -1.24
PTPRA-203ENST00000356147 C11orf44Q8N8P7 122 aa7.3□□□□□ -1.24
PTPRA-203ENST00000356147 DAZ3Q9NR90 486 aaKnown RBP7.3□□□□□ -1.24
PTPRA-203ENST00000356147 YAE1D1Q9NRH1 226 aa7.3□□□□□ -1.24
PTPRA-203ENST00000356147 CIRBPQ14011 172 aaKnown RBP7.3□□□□□ -1.24
PTPRA-203ENST00000356147 ZNF415Q09FC8 603 aa7.29□□□□□ -1.24
PTPRA-203ENST00000356147 NDUFA1O15239 70 aa7.29□□□□□ -1.24
PTPRA-203ENST00000356147 TRGV1A0A0A0MS02 117 aa7.28□□□□□ -1.24
PTPRA-203ENST00000356147 UCNP55089 124 aa7.28□□□□□ -1.24
PTPRA-203ENST00000356147 TOMM7Q9P0U1 55 aa7.28□□□□□ -1.24
PTPRA-203ENST00000356147 BAALC-AS2P0C853 105 aa7.28□□□□□ -1.24
PTPRA-203ENST00000356147 B4DSR2 109 aa7.27□□□□□ -1.24
PTPRA-203ENST00000356147 SETXQ7Z333 2677 aaKnown RBP7.27□□□□□ -1.25
PTPRA-203ENST00000356147 SMIM1B2RUZ4 78 aa7.27□□□□□ -1.25
PTPRA-203ENST00000356147 COX7A2LO14548 114 aa7.27□□□□□ -1.25
PTPRA-203ENST00000356147 C11orf72Q8NBR9 251 aa7.27□□□□□ -1.25
PTPRA-203ENST00000356147 KLK5Q9Y337 293 aaPredicted RBP7.27□□□□□ -1.25
PTPRA-203ENST00000356147 NBPF19A0A087WUL8 3843 aa7.27□□□□□ -1.25
PTPRA-203ENST00000356147 GAGE2AQ6NT46 116 aa7.27□□□□□ -1.25
PTPRA-203ENST00000356147 NBEAL2Q6ZNJ1 2754 aa7.27□□□□□ -1.25
PTPRA-203ENST00000356147 LINC01600Q96MT4 127 aa7.26□□□□□ -1.25
PTPRA-203ENST00000356147 IGSF10Q6WRI0 2623 aa7.26□□□□□ -1.25
PTPRA-203ENST00000356147 C9orf129Q5T035 196 aaKnown RBP7.26□□□□□ -1.25
PTPRA-203ENST00000356147 NTM-AS1Q6ZSK4 140 aa7.26□□□□□ -1.25
PTPRA-203ENST00000356147 Q96MF0 132 aa7.26□□□□□ -1.25
PTPRA-203ENST00000356147 MAP6D1Q9H9H5 199 aa7.26□□□□□ -1.25
PTPRA-203ENST00000356147 TMEM89A2RUT3 159 aa7.25□□□□□ -1.25
PTPRA-203ENST00000356147 Q6ZTI0 123 aa7.25□□□□□ -1.25
PTPRA-203ENST00000356147 DYNLRB2Q8TF09 96 aa7.25□□□□□ -1.25
PTPRA-203ENST00000356147 PLA2G2AP14555 144 aa7.25□□□□□ -1.25
PTPRA-203ENST00000356147 TIRAPP58753 221 aa7.25□□□□□ -1.25
PTPRA-203ENST00000356147 DEFB121Q5J5C9 76 aa7.25□□□□□ -1.25
PTPRA-203ENST00000356147 C22orf24Q9Y442 160 aa7.25□□□□□ -1.25
PTPRA-203ENST00000356147 LOC100131303A0A0U1RQF7 123 aa7.24□□□□□ -1.25
PTPRA-203ENST00000356147 FAM240AA0A1B0GVK7 77 aa7.24□□□□□ -1.25
PTPRA-203ENST00000356147 A0A1W2PRX2 142 aa7.24□□□□□ -1.25
PTPRA-203ENST00000356147 TIMM17BO60830 172 aa7.24□□□□□ -1.25
PTPRA-203ENST00000356147 ATP5G1P05496 136 aa7.24□□□□□ -1.25
PTPRA-203ENST00000356147 HERVK_113P63121 156 aa7.24□□□□□ -1.25
PTPRA-203ENST00000356147 C11orf68Q9H3H3 251 aaKnown RBP7.24□□□□□ -1.25
PTPRA-203ENST00000356147 ZNF702PQ9H963 129 aa7.24□□□□□ -1.25
PTPRA-203ENST00000356147 IGLV5-39A0A0G2JS06 123 aa7.24□□□□□ -1.25
PTPRA-203ENST00000356147 TRBV7-7A0A0K0K1E9 115 aa7.24□□□□□ -1.25
PTPRA-203ENST00000356147 ZNF469Q96JG9 3925 aaPredicted RBP7.24□□□□□ -1.25
PTPRA-203ENST00000356147 IGLV5-45A0A087WSX0 123 aa7.23□□□□□ -1.25
PTPRA-203ENST00000356147 C9orf153Q5TBE3 101 aa7.23□□□□□ -1.25
PTPRA-203ENST00000356147 MIR7-3HGQ8N6C7 128 aa7.23□□□□□ -1.25
PTPRA-203ENST00000356147 PPDPFQ9H3Y8 114 aa7.23□□□□□ -1.25
PTPRA-203ENST00000356147 EDA2RQ9HAV5 297 aa7.23□□□□□ -1.25
PTPRA-203ENST00000356147 MTORP42345 2549 aa7.23□□□□□ -1.25
PTPRA-203ENST00000356147 INSP01308 110 aa7.22□□□□□ -1.25
PTPRA-203ENST00000356147 BEAN1Q3B7T3 259 aa7.22□□□□□ -1.25
PTPRA-203ENST00000356147 SDIM1Q6ZPB5 146 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms