RNA–Protein interactions for RNA: ENST00000355354.11

CD47-201, Transcript of CD47 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD47, Length 5,020 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-201ENST00000355354 SMIM2Q9BVW6 85 aa3.87□□□□□ -1.79
CD47-201ENST00000355354 IGHV1-69DA0A0B4J2H0 117 aa3.87□□□□□ -1.79
CD47-201ENST00000355354 IGHV1-69P01742 117 aa3.87□□□□□ -1.79
CD47-201ENST00000355354 MC5RP33032 325 aa3.87□□□□□ -1.79
CD47-201ENST00000355354 COX19Q49B96 90 aa3.86□□□□□ -1.79
CD47-201ENST00000355354 UBE2E1P51965 193 aa3.86□□□□□ -1.79
CD47-201ENST00000355354 UBE2D3P61077 147 aa3.86□□□□□ -1.79
CD47-201ENST00000355354 UBE2D2P62837 147 aa3.86□□□□□ -1.79
CD47-201ENST00000355354 SAMD13Q5VXD3 122 aa3.86□□□□□ -1.79
CD47-201ENST00000355354 KRTAP11-1Q8IUC1 163 aa3.86□□□□□ -1.79
CD47-201ENST00000355354 TTC9CQ8N5M4 171 aa3.86□□□□□ -1.79
CD47-201ENST00000355354 RAB9AP51151 201 aa3.86□□□□□ -1.79
CD47-201ENST00000355354 ZNF876PQ49A33 203 aa3.86□□□□□ -1.79
CD47-201ENST00000355354 C6orf223Q8N319 242 aa3.86□□□□□ -1.79
CD47-201ENST00000355354 OTORQ9NRC9 128 aa3.86□□□□□ -1.79
CD47-201ENST00000355354 HBDP02042 147 aa3.86□□□□□ -1.79
CD47-201ENST00000355354 MUSTN1Q8IVN3 82 aa3.86□□□□□ -1.79
CD47-201ENST00000355354 IGKV3OR2-268A0A0C4DH90 116 aa3.85□□□□□ -1.79
CD47-201ENST00000355354 GAGE10A6NGK3 116 aa3.85□□□□□ -1.79
CD47-201ENST00000355354 KRTAP7-1Q8IUC3 87 aa3.85□□□□□ -1.79
CD47-201ENST00000355354 TMEM189A5PLL7 270 aa3.85□□□□□ -1.79
CD47-201ENST00000355354 K7EP34 96 aa3.85□□□□□ -1.79
CD47-201ENST00000355354 SPINK8P0C7L1 97 aa3.85□□□□□ -1.79
CD47-201ENST00000355354 MGPP08493 103 aa3.85□□□□□ -1.79
CD47-201ENST00000355354 NPFFO15130 113 aa3.85□□□□□ -1.79
CD47-201ENST00000355354 IGHV3-33P01772 117 aa3.85□□□□□ -1.79
CD47-201ENST00000355354 DNLZQ5SXM8 178 aa3.85□□□□□ -1.79
CD47-201ENST00000355354 OR4X2Q8NGF9 303 aa3.85□□□□□ -1.79
CD47-201ENST00000355354 ST20Q9HBF5 79 aa3.85□□□□□ -1.79
CD47-201ENST00000355354 SS18L2Q9UHA2 77 aa3.85□□□□□ -1.79
CD47-201ENST00000355354 IGLV1-40P01703 118 aa3.84□□□□□ -1.79
CD47-201ENST00000355354 IGHV3-30-3P0DP02 117 aa3.84□□□□□ -1.79
CD47-201ENST00000355354 LINC01559Q495D7 138 aa3.84□□□□□ -1.79
CD47-201ENST00000355354 ANKRD29Q8N6D5 301 aa3.84□□□□□ -1.79
CD47-201ENST00000355354 M0R1W7 72 aa3.84□□□□□ -1.79
CD47-201ENST00000355354 LGALS9BQ3B8N2 356 aa3.84□□□□□ -1.79
CD47-201ENST00000355354 LGALS9CQ6DKI2 356 aa3.84□□□□□ -1.79
CD47-201ENST00000355354 NDUFA11Q86Y39 141 aa3.84□□□□□ -1.79
CD47-201ENST00000355354 KIR2DL5BQ8NHK3 375 aa3.84□□□□□ -1.79
CD47-201ENST00000355354 CHCHD7Q9BUK0 85 aa3.84□□□□□ -1.79
CD47-201ENST00000355354 TMEM14CQ9P0S9 112 aa3.84□□□□□ -1.79
CD47-201ENST00000355354 VPREB3Q9UKI3 123 aa3.84□□□□□ -1.79
CD47-201ENST00000355354 GAGE12HA6NDE8 117 aa3.84□□□□□ -1.79
CD47-201ENST00000355354 OVOL1O14753 267 aa3.84□□□□□ -1.79
CD47-201ENST00000355354 HSD52Q0P140 79 aa3.84□□□□□ -1.79
CD47-201ENST00000355354 IGLV10-54A0A075B6I4 117 aa3.84□□□□□ -1.8
CD47-201ENST00000355354 DEFB131AP59861 70 aa3.84□□□□□ -1.8
CD47-201ENST00000355354 C11orf68Q9H3H3 251 aaKnown RBP3.84□□□□□ -1.8
CD47-201ENST00000355354 FABP5P3A8MUU1 101 aa3.83□□□□□ -1.8
CD47-201ENST00000355354 ANGP03950 147 aaKnown RBP3.83□□□□□ -1.8
CD47-201ENST00000355354 LOC107984156A0A0G2JMH3 177 aa3.83□□□□□ -1.8
CD47-201ENST00000355354 A0A1B0GWB2 263 aa3.83□□□□□ -1.8
CD47-201ENST00000355354 TTC32Q5I0X7 151 aa3.83□□□□□ -1.8
CD47-201ENST00000355354 Q6AWC8 147 aa3.83□□□□□ -1.8
CD47-201ENST00000355354 ARL17AQ8IVW1 177 aa3.83□□□□□ -1.8
CD47-201ENST00000355354 DSTQ03001 7570 aaKnown RBP3.83□□□□□ -1.8
CD47-201ENST00000355354 B5MCH6 92 aa3.83□□□□□ -1.8
CD47-201ENST00000355354 F8VRH5 84 aa3.83□□□□□ -1.8
CD47-201ENST00000355354 KMT2DO14686 5537 aa3.82□□□□□ -1.8
CD47-201ENST00000355354 LBHQ53QV2 105 aaPredicted RBP3.82□□□□□ -1.8
CD47-201ENST00000355354 LELP1Q5T871 98 aa3.82□□□□□ -1.8
CD47-201ENST00000355354 PPDPFQ9H3Y8 114 aa3.82□□□□□ -1.8
CD47-201ENST00000355354 MT-ND6P03923 174 aa3.82□□□□□ -1.8
CD47-201ENST00000355354 C3orf22Q8N5N4 141 aa3.82□□□□□ -1.8
CD47-201ENST00000355354 FMC1Q96HJ9 113 aa3.82□□□□□ -1.8
CD47-201ENST00000355354 AAMDCQ9H7C9 122 aa3.82□□□□□ -1.8
CD47-201ENST00000355354 OOSP1A8MZH6 123 aa3.82□□□□□ -1.8
CD47-201ENST00000355354 Q8N8P6 123 aa3.82□□□□□ -1.8
CD47-201ENST00000355354 HSBP1L1C9JCN9 74 aa3.82□□□□□ -1.8
CD47-201ENST00000355354 M0QZK8 103 aa3.82□□□□□ -1.8
CD47-201ENST00000355354 Q8N9L7 120 aa3.82□□□□□ -1.8
CD47-201ENST00000355354 RETNQ9HD89 108 aa3.82□□□□□ -1.8
CD47-201ENST00000355354 A0A087WX48 190 aa3.81□□□□□ -1.8
CD47-201ENST00000355354 A0A0J9YX75 114 aa3.81□□□□□ -1.8
CD47-201ENST00000355354 PRSS2P07478 247 aa3.81□□□□□ -1.8
CD47-201ENST00000355354 CD28P10747 220 aa3.81□□□□□ -1.8
CD47-201ENST00000355354 TMEM170BQ5T4T1 132 aa3.81□□□□□ -1.8
CD47-201ENST00000355354 SPANXN1Q5VSR9 72 aa3.81□□□□□ -1.8
CD47-201ENST00000355354 FA2HQ7L5A8 372 aa3.81□□□□□ -1.8
CD47-201ENST00000355354 B9D2Q9BPU9 175 aa3.81□□□□□ -1.8
CD47-201ENST00000355354 MRPL32Q9BYC8 188 aaKnown RBP3.81□□□□□ -1.8
CD47-201ENST00000355354 EDA2RQ9HAV5 297 aa3.81□□□□□ -1.8
CD47-201ENST00000355354 K7EQG2 157 aa3.81□□□□□ -1.8
CD47-201ENST00000355354 RRN3P1Q2M238 152 aa3.81□□□□□ -1.8
CD47-201ENST00000355354 TMEM78Q5T7P6 136 aa3.81□□□□□ -1.8
CD47-201ENST00000355354 C12orf54Q6X4T0 127 aa3.81□□□□□ -1.8
CD47-201ENST00000355354 ZNF815PA8K554 130 aa3.81□□□□□ -1.8
CD47-201ENST00000355354 H7C423 109 aa3.81□□□□□ -1.8
CD47-201ENST00000355354 MRPL23Q16540 153 aaKnown RBP3.81□□□□□ -1.8
CD47-201ENST00000355354 CELA1Q9UNI1 258 aa3.81□□□□□ -1.8
CD47-201ENST00000355354 MINOS1Q5TGZ0 78 aa3.81□□□□□ -1.8
CD47-201ENST00000355354 C8orf31Q8N9H6 132 aa3.81□□□□□ -1.8
CD47-201ENST00000355354 A0A087WYN8 130 aa3.8□□□□□ -1.8
CD47-201ENST00000355354 TRAV41A0A0B4J266 112 aa3.8□□□□□ -1.8
CD47-201ENST00000355354 LINC01546A6NGU7 62 aa3.8□□□□□ -1.8
CD47-201ENST00000355354 F5H768 121 aa3.8□□□□□ -1.8
CD47-201ENST00000355354 ID1P41134 155 aa3.8□□□□□ -1.8
CD47-201ENST00000355354 FOXI1Q12951 378 aa3.8□□□□□ -1.8
CD47-201ENST00000355354 CT83Q5H943 113 aa3.8□□□□□ -1.8
CD47-201ENST00000355354 OR11H1Q8NG94 326 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms