RNA–Protein interactions for RNA: ENST00000349748.7

CAPN3-203, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-203ENST00000349748 SMIM26A0A096LP01 95 aa7.8□□□□□ -1.16
CAPN3-203ENST00000349748 FAM222AQ5U5X8 452 aa7.8□□□□□ -1.16
CAPN3-203ENST00000349748 VSIG2Q96IQ7 327 aa7.8□□□□□ -1.16
CAPN3-203ENST00000349748 FAM19A1Q7Z5A9 133 aa7.8□□□□□ -1.16
CAPN3-203ENST00000349748 MYO18BQ8IUG5 2567 aa7.79□□□□□ -1.16
CAPN3-203ENST00000349748 C20orf173Q96LM9 149 aa7.79□□□□□ -1.16
CAPN3-203ENST00000349748 TRAV21A0A0B4J279 112 aa7.79□□□□□ -1.16
CAPN3-203ENST00000349748 A0A1W2PRX2 142 aa7.79□□□□□ -1.16
CAPN3-203ENST00000349748 KNCNA6PVL3 124 aa7.79□□□□□ -1.16
CAPN3-203ENST00000349748 IGLV1-47P01700 117 aa7.79□□□□□ -1.16
CAPN3-203ENST00000349748 C20orf203Q8NBC4 194 aa7.79□□□□□ -1.16
CAPN3-203ENST00000349748 LINC00308Q8TCZ7 52 aa7.79□□□□□ -1.16
CAPN3-203ENST00000349748 ZFHX3Q15911 3703 aa7.78□□□□□ -1.16
CAPN3-203ENST00000349748 CD28P10747 220 aa7.78□□□□□ -1.16
CAPN3-203ENST00000349748 SNURFQ9Y675 71 aa7.78□□□□□ -1.16
CAPN3-203ENST00000349748 GNLYP22749 145 aa7.77□□□□□ -1.16
CAPN3-203ENST00000349748 SOSTDC1Q6X4U4 206 aa7.77□□□□□ -1.16
CAPN3-203ENST00000349748 HIVEP3Q5T1R4 2406 aa7.77□□□□□ -1.16
CAPN3-203ENST00000349748 NCR3O14931 201 aa7.77□□□□□ -1.17
CAPN3-203ENST00000349748 SIRPDQ9H106 197 aa7.77□□□□□ -1.17
CAPN3-203ENST00000349748 NBR2O15453 112 aa7.77□□□□□ -1.17
CAPN3-203ENST00000349748 FAM104AQ969W3 186 aa7.77□□□□□ -1.17
CAPN3-203ENST00000349748 F6UB75 175 aa7.76□□□□□ -1.17
CAPN3-203ENST00000349748 GRNP28799 593 aaKnown RBP7.76□□□□□ -1.17
CAPN3-203ENST00000349748 MRPS36P82909 103 aaKnown RBP7.76□□□□□ -1.17
CAPN3-203ENST00000349748 FASNP49327 2511 aaKnown RBP7.76□□□□□ -1.17
CAPN3-203ENST00000349748 KMT2BQ9UMN6 2715 aaPredicted RBP7.76□□□□□ -1.17
CAPN3-203ENST00000349748 ENHOQ6UWT2 76 aa7.76□□□□□ -1.17
CAPN3-203ENST00000349748 BPESC1Q9GZL8 116 aa7.76□□□□□ -1.17
CAPN3-203ENST00000349748 ASH1LQ9NR48 2969 aaKnown RBP7.75□□□□□ -1.17
CAPN3-203ENST00000349748 RBM3P98179 157 aaKnown RBP7.75□□□□□ -1.17
CAPN3-203ENST00000349748 MPLKIPQ8TAP9 179 aa7.75□□□□□ -1.17
CAPN3-203ENST00000349748 RMI2Q96E14 147 aa7.75□□□□□ -1.17
CAPN3-203ENST00000349748 A0A087WYN8 130 aa7.75□□□□□ -1.17
CAPN3-203ENST00000349748 TRBV7-6A0A0J9YX20 115 aa7.74□□□□□ -1.17
CAPN3-203ENST00000349748 LINC01560Q8TB33 94 aa7.74□□□□□ -1.17
CAPN3-203ENST00000349748 TIMM17BO60830 172 aa7.74□□□□□ -1.17
CAPN3-203ENST00000349748 CCKP06307 115 aa7.74□□□□□ -1.17
CAPN3-203ENST00000349748 LY6G5BQ8NDX9 201 aa7.74□□□□□ -1.17
CAPN3-203ENST00000349748 FLNCQ14315 2725 aa7.74□□□□□ -1.17
CAPN3-203ENST00000349748 M0QY20 66 aa7.74□□□□□ -1.17
CAPN3-203ENST00000349748 ADORA2A-AS1P86434 159 aa7.74□□□□□ -1.17
CAPN3-203ENST00000349748 C15orf32Q32M92 178 aa7.74□□□□□ -1.17
CAPN3-203ENST00000349748 AKAP6Q13023 2319 aa7.73□□□□□ -1.17
CAPN3-203ENST00000349748 TRBV6-5A0A0K0K1A5 114 aa7.73□□□□□ -1.17
CAPN3-203ENST00000349748 F8WEM9 126 aa7.73□□□□□ -1.17
CAPN3-203ENST00000349748 Q9H8V8 135 aa7.73□□□□□ -1.17
CAPN3-203ENST00000349748 KLK9Q9UKQ9 250 aa7.73□□□□□ -1.17
CAPN3-203ENST00000349748 ANKHD1Q8IWZ3 2542 aaKnown RBP7.72□□□□□ -1.17
CAPN3-203ENST00000349748 BSPH1Q075Z2 132 aa7.72□□□□□ -1.17
CAPN3-203ENST00000349748 CLEC19AQ6UXS0 136 aa7.72□□□□□ -1.17
CAPN3-203ENST00000349748 MRPL53Q96EL3 112 aaKnown RBP7.72□□□□□ -1.17
CAPN3-203ENST00000349748 LRRK2Q5S007 2527 aa7.72□□□□□ -1.17
CAPN3-203ENST00000349748 SLPIP03973 132 aa7.72□□□□□ -1.17
CAPN3-203ENST00000349748 MED14OSP0DP75 135 aa7.72□□□□□ -1.17
CAPN3-203ENST00000349748 PIK3CD-AS1Q5SR53 167 aa7.72□□□□□ -1.17
CAPN3-203ENST00000349748 CDKN2A-AS1Q9UH64 79 aa7.72□□□□□ -1.17
CAPN3-203ENST00000349748 MED13LQ71F56 2210 aa7.72□□□□□ -1.17
CAPN3-203ENST00000349748 IGKV3-7A0A075B6H7 116 aa7.71□□□□□ -1.17
CAPN3-203ENST00000349748 FAM229BQ4G0N7 80 aa7.71□□□□□ -1.17
CAPN3-203ENST00000349748 ZNF843Q8N446 348 aa7.71□□□□□ -1.18
CAPN3-203ENST00000349748 NDUFA1O15239 70 aa7.71□□□□□ -1.18
CAPN3-203ENST00000349748 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.71□□□□□ -1.18
CAPN3-203ENST00000349748 ITLN2Q8WWU7 325 aaPredicted RBP7.71□□□□□ -1.18
CAPN3-203ENST00000349748 USP9XQ93008 2570 aaPredicted RBP7.7□□□□□ -1.18
CAPN3-203ENST00000349748 C4orf48Q5BLP8 95 aa7.7□□□□□ -1.18
CAPN3-203ENST00000349748 RNF5Q99942 180 aa7.7□□□□□ -1.18
CAPN3-203ENST00000349748 RETNQ9HD89 108 aa7.7□□□□□ -1.18
CAPN3-203ENST00000349748 LENEPQ9Y5L5 61 aa7.7□□□□□ -1.18
CAPN3-203ENST00000349748 SOCS3O14543 225 aa7.7□□□□□ -1.18
CAPN3-203ENST00000349748 HELZ2Q9BYK8 2649 aaKnown RBP7.7□□□□□ -1.18
CAPN3-203ENST00000349748 HIST2H2BCQ6DN03 193 aa7.69□□□□□ -1.18
CAPN3-203ENST00000349748 HIST2H2BDQ6DRA6 164 aa7.69□□□□□ -1.18
CAPN3-203ENST00000349748 OBSCN-AS1Q96MR7 158 aa7.69□□□□□ -1.18
CAPN3-203ENST00000349748 LYNX1G3V0Z9 82 aa7.69□□□□□ -1.18
CAPN3-203ENST00000349748 LYNX1P0DP58 116 aa7.69□□□□□ -1.18
CAPN3-203ENST00000349748 ECSCRQ19T08 205 aa7.68□□□□□ -1.18
CAPN3-203ENST00000349748 SNRPD3P62318 126 aaKnown RBP7.68□□□□□ -1.18
CAPN3-203ENST00000349748 PMAIP1Q13794 54 aa7.68□□□□□ -1.18
CAPN3-203ENST00000349748 MIR7-3HGQ8N6C7 128 aa7.68□□□□□ -1.18
CAPN3-203ENST00000349748 CCDC140Q96MF4 163 aa7.68□□□□□ -1.18
CAPN3-203ENST00000349748 LECT2O14960 151 aa7.68□□□□□ -1.18
CAPN3-203ENST00000349748 S100A7L2Q5SY68 101 aa7.68□□□□□ -1.18
CAPN3-203ENST00000349748 NPBQ8NG41 125 aa7.68□□□□□ -1.18
CAPN3-203ENST00000349748 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.67□□□□□ -1.18
CAPN3-203ENST00000349748 IGHV3-73A0A0B4J1V6 119 aa7.67□□□□□ -1.18
CAPN3-203ENST00000349748 IGKV2-29A2NJV5 120 aaPredicted RBP7.67□□□□□ -1.18
CAPN3-203ENST00000349748 KLKP1Q107X0 134 aa7.67□□□□□ -1.18
CAPN3-203ENST00000349748 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.67□□□□□ -1.18
CAPN3-203ENST00000349748 UNQ9165/PRO28630Q6UXU0 137 aa7.67□□□□□ -1.18
CAPN3-203ENST00000349748 SPG11Q96JI7 2443 aa7.67□□□□□ -1.18
CAPN3-203ENST00000349748 HRNRQ86YZ3 2850 aaPredicted RBP7.66□□□□□ -1.18
CAPN3-203ENST00000349748 TRAV7A0A075B6U4 112 aa7.66□□□□□ -1.18
CAPN3-203ENST00000349748 C6orf226Q5I0X4 101 aa7.66□□□□□ -1.18
CAPN3-203ENST00000349748 LINC00337Q8N6G1 96 aa7.66□□□□□ -1.18
CAPN3-203ENST00000349748 TRAV10A0A0B4J240 114 aa7.66□□□□□ -1.18
CAPN3-203ENST00000349748 COX6A2Q02221 97 aa7.66□□□□□ -1.18
CAPN3-203ENST00000349748 KAAG1Q9UBP8 84 aa7.66□□□□□ -1.18
CAPN3-203ENST00000349748 Q9UF83 564 aa7.66□□□□□ -1.18
CAPN3-203ENST00000349748 UTP20O75691 2785 aaKnown RBP7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms