RNA–Protein interactions for RNA: ENST00000349225.2

RLIM-202, Transcript of ring finger protein, LIM domain interacting, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RLIM, Length 3,478 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RLIM-202ENST00000349225 FAM222AQ5U5X8 452 aa10.29□□□□□ -0.76
RLIM-202ENST00000349225 IGLV5-39A0A0G2JS06 123 aa10.28□□□□□ -0.76
RLIM-202ENST00000349225 LINC00846Q9NV44 126 aa10.28□□□□□ -0.76
RLIM-202ENST00000349225 SPTA1P02549 2419 aa10.28□□□□□ -0.76
RLIM-202ENST00000349225 MALP21145 153 aa10.28□□□□□ -0.76
RLIM-202ENST00000349225 OR13C6PQ8NH95 151 aa10.28□□□□□ -0.76
RLIM-202ENST00000349225 MOB4Q9Y3A3 225 aa10.28□□□□□ -0.76
RLIM-202ENST00000349225 KLRB1Q12918 225 aa10.27□□□□□ -0.76
RLIM-202ENST00000349225 IGHV3OR16-12A0A075B7B8 117 aa10.27□□□□□ -0.77
RLIM-202ENST00000349225 RNF152Q8N8N0 203 aa10.27□□□□□ -0.77
RLIM-202ENST00000349225 C14orf132Q9NPU4 83 aa10.27□□□□□ -0.77
RLIM-202ENST00000349225 A0A1W2PPR1 153 aa10.27□□□□□ -0.77
RLIM-202ENST00000349225 HTN1P15515 57 aa10.26□□□□□ -0.77
RLIM-202ENST00000349225 PRIMA1Q86XR5 153 aa10.26□□□□□ -0.77
RLIM-202ENST00000349225 A0A087WYN8 130 aa10.26□□□□□ -0.77
RLIM-202ENST00000349225 PF4V1P10720 104 aa10.26□□□□□ -0.77
RLIM-202ENST00000349225 ZNF292O60281 2723 aa10.25□□□□□ -0.77
RLIM-202ENST00000349225 TMEM258P61165 79 aa10.25□□□□□ -0.77
RLIM-202ENST00000349225 LINC00242Q5T6M2 205 aa10.25□□□□□ -0.77
RLIM-202ENST00000349225 HRCT1Q6UXD1 115 aa10.25□□□□□ -0.77
RLIM-202ENST00000349225 CIRBPQ14011 172 aaKnown RBP10.25□□□□□ -0.77
RLIM-202ENST00000349225 BRD3OSQ6XYD6 125 aa10.25□□□□□ -0.77
RLIM-202ENST00000349225 SMIM1B2RUZ4 78 aa10.24□□□□□ -0.77
RLIM-202ENST00000349225 INAFM2P0DMQ5 153 aa10.24□□□□□ -0.77
RLIM-202ENST00000349225 SERP2Q8N6R1 65 aa10.24□□□□□ -0.77
RLIM-202ENST00000349225 MAP1AP78559 2803 aaPredicted RBP10.24□□□□□ -0.77
RLIM-202ENST00000349225 BLCAPP62952 87 aa10.24□□□□□ -0.77
RLIM-202ENST00000349225 LINC00337Q8N6G1 96 aa10.23□□□□□ -0.77
RLIM-202ENST00000349225 LY6EQ16553 131 aa10.23□□□□□ -0.77
RLIM-202ENST00000349225 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.23□□□□□ -0.77
RLIM-202ENST00000349225 USMG5Q96IX5 58 aa10.23□□□□□ -0.77
RLIM-202ENST00000349225 FHL2Q14192 279 aa10.23□□□□□ -0.77
RLIM-202ENST00000349225 PIMREGQ9BSJ6 248 aa10.23□□□□□ -0.77
RLIM-202ENST00000349225 IGKV2-28A0A075B6P5 120 aa10.22□□□□□ -0.77
RLIM-202ENST00000349225 IGKV2D-28P01615 120 aa10.22□□□□□ -0.77
RLIM-202ENST00000349225 SYNJ2BPP57105 145 aa10.22□□□□□ -0.77
RLIM-202ENST00000349225 LMO4P61968 165 aa10.22□□□□□ -0.77
RLIM-202ENST00000349225 HIST2H2BCQ6DN03 193 aa10.21□□□□□ -0.77
RLIM-202ENST00000349225 HIST2H2BDQ6DRA6 164 aa10.21□□□□□ -0.77
RLIM-202ENST00000349225 OBSCN-AS1Q96MR7 158 aa10.21□□□□□ -0.77
RLIM-202ENST00000349225 USP17L23D6RBM5 183 aa10.21□□□□□ -0.77
RLIM-202ENST00000349225 Q6JHZ5 121 aa10.21□□□□□ -0.77
RLIM-202ENST00000349225 RPL28P46779 137 aaKnown RBP10.2□□□□□ -0.78
RLIM-202ENST00000349225 AKAP9Q99996 3911 aa10.2□□□□□ -0.78
RLIM-202ENST00000349225 K7EQG2 157 aa10.2□□□□□ -0.78
RLIM-202ENST00000349225 HILS1P60008 231 aa10.2□□□□□ -0.78
RLIM-202ENST00000349225 CCL21O00585 134 aa10.2□□□□□ -0.78
RLIM-202ENST00000349225 DNAL4O96015 105 aa10.2□□□□□ -0.78
RLIM-202ENST00000349225 IGLV1-40P01703 118 aa10.2□□□□□ -0.78
RLIM-202ENST00000349225 Q96MF0 132 aa10.2□□□□□ -0.78
RLIM-202ENST00000349225 F5H768 121 aa10.19□□□□□ -0.78
RLIM-202ENST00000349225 C10orf99Q6UWK7 81 aa10.19□□□□□ -0.78
RLIM-202ENST00000349225 BPESC1Q9GZL8 116 aa10.19□□□□□ -0.78
RLIM-202ENST00000349225 K7EMT4 169 aa10.19□□□□□ -0.78
RLIM-202ENST00000349225 FBXL19-AS1Q494R0 122 aa10.19□□□□□ -0.78
RLIM-202ENST00000349225 CELSR2Q9HCU4 2923 aa10.18□□□□□ -0.78
RLIM-202ENST00000349225 NCR3O14931 201 aa10.18□□□□□ -0.78
RLIM-202ENST00000349225 SS18Q15532 418 aa10.18□□□□□ -0.78
RLIM-202ENST00000349225 C10orf105Q8TEF2 133 aa10.18□□□□□ -0.78
RLIM-202ENST00000349225 PRORYQ9H606 182 aa10.18□□□□□ -0.78
RLIM-202ENST00000349225 SMIM11BQ8TCY0 68 aa10.17□□□□□ -0.78
RLIM-202ENST00000349225 WFDC9Q8NEX5 89 aa10.17□□□□□ -0.78
RLIM-202ENST00000349225 H3BUA1 57 aa10.16□□□□□ -0.78
RLIM-202ENST00000349225 CFHR3Q02985 330 aa10.16□□□□□ -0.78
RLIM-202ENST00000349225 SNRPD3P62318 126 aaKnown RBP10.16□□□□□ -0.78
RLIM-202ENST00000349225 ZNF415Q09FC8 603 aa10.16□□□□□ -0.78
RLIM-202ENST00000349225 SLPIP03973 132 aa10.16□□□□□ -0.78
RLIM-202ENST00000349225 NBPF19A0A087WUL8 3843 aa10.15□□□□□ -0.78
RLIM-202ENST00000349225 RBMY1BA6NDE4 496 aaKnown RBP10.15□□□□□ -0.78
RLIM-202ENST00000349225 RBMY1EA6NEQ0 496 aaKnown RBP10.15□□□□□ -0.78
RLIM-202ENST00000349225 RBMY1DP0C7P1 496 aaKnown RBP10.15□□□□□ -0.78
RLIM-202ENST00000349225 IGHV4-38-2P0DP08 117 aa10.15□□□□□ -0.79
RLIM-202ENST00000349225 FAM19A3Q7Z5A8 133 aa10.14□□□□□ -0.79
RLIM-202ENST00000349225 H3BUX3 64 aa10.14□□□□□ -0.79
RLIM-202ENST00000349225 ADORA2A-AS1P86434 159 aa10.14□□□□□ -0.79
RLIM-202ENST00000349225 K7ENP7 123 aa10.13□□□□□ -0.79
RLIM-202ENST00000349225 IGHV3-53P01767 116 aa10.13□□□□□ -0.79
RLIM-202ENST00000349225 DGAT2L7PQ6IED9 249 aa10.13□□□□□ -0.79
RLIM-202ENST00000349225 RIF1Q5UIP0 2472 aaKnown RBP10.13□□□□□ -0.79
RLIM-202ENST00000349225 MIR7-3HGQ8N6C7 128 aa10.13□□□□□ -0.79
RLIM-202ENST00000349225 LECT2O14960 151 aa10.12□□□□□ -0.79
RLIM-202ENST00000349225 CRPP02741 224 aa10.12□□□□□ -0.79
RLIM-202ENST00000349225 NTM-AS1Q6ZSK4 140 aa10.12□□□□□ -0.79
RLIM-202ENST00000349225 CREBBPQ92793 2442 aa10.12□□□□□ -0.79
RLIM-202ENST00000349225 TTC28Q96AY4 2481 aa10.12□□□□□ -0.79
RLIM-202ENST00000349225 TRAV13-2A0A0B4J235 113 aa10.12□□□□□ -0.79
RLIM-202ENST00000349225 CEP295Q9C0D2 2601 aa10.12□□□□□ -0.79
RLIM-202ENST00000349225 A6NDX4 124 aa10.12□□□□□ -0.79
RLIM-202ENST00000349225 C11orf72Q8NBR9 251 aa10.12□□□□□ -0.79
RLIM-202ENST00000349225 COPS9Q8WXC6 57 aa10.12□□□□□ -0.79
RLIM-202ENST00000349225 SND1-IT1Q9HBX3 110 aa10.11□□□□□ -0.79
RLIM-202ENST00000349225 ATRXP46100 2492 aa10.11□□□□□ -0.79
RLIM-202ENST00000349225 FAM19A1Q7Z5A9 133 aa10.11□□□□□ -0.79
RLIM-202ENST00000349225 TRAV23DV6A0A075B6W5 121 aa10.1□□□□□ -0.79
RLIM-202ENST00000349225 PF4P02776 101 aa10.1□□□□□ -0.79
RLIM-202ENST00000349225 C2CD3Q4AC94 2353 aa10.09□□□□□ -0.79
RLIM-202ENST00000349225 PSMB8P28062 276 aa10.09□□□□□ -0.79
RLIM-202ENST00000349225 GHRHP01286 108 aa10.09□□□□□ -0.79
RLIM-202ENST00000349225 CCL18P55774 89 aa10.08□□□□□ -0.8
RLIM-202ENST00000349225 CDC42SE2Q9NRR3 84 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms