RNA–Protein interactions for RNA: ENST00000344921.10

SMARCB1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 2 BASIC

Gene SMARCB1, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-202ENST00000344921 DNAH17Q9UFH2 4485 aa13.93□□□□□ -0.18
SMARCB1-202ENST00000344921 IGLV4-60A0A075B6I1 120 aa13.93□□□□□ -0.18
SMARCB1-202ENST00000344921 IGKV2D-24A0A075B6R9 120 aa13.93□□□□□ -0.18
SMARCB1-202ENST00000344921 KIAA1644Q3SXP7 199 aa13.93□□□□□ -0.18
SMARCB1-202ENST00000344921 LOC389332A0A1B0GUA5 103 aa13.92□□□□□ -0.18
SMARCB1-202ENST00000344921 ESDP10768 282 aa13.92□□□□□ -0.18
SMARCB1-202ENST00000344921 ENHOQ6UWT2 76 aa13.92□□□□□ -0.18
SMARCB1-202ENST00000344921 MAP1LC3AQ9H492 121 aa13.92□□□□□ -0.18
SMARCB1-202ENST00000344921 TSTD3H0UI37 97 aa13.91□□□□□ -0.18
SMARCB1-202ENST00000344921 TCAPO15273 167 aa13.91□□□□□ -0.18
SMARCB1-202ENST00000344921 FGF6P10767 208 aa13.91□□□□□ -0.18
SMARCB1-202ENST00000344921 LBHQ53QV2 105 aaPredicted RBP13.91□□□□□ -0.18
SMARCB1-202ENST00000344921 C20orf203Q8NBC4 194 aa13.91□□□□□ -0.18
SMARCB1-202ENST00000344921 COX11Q9Y6N1 276 aa13.91□□□□□ -0.18
SMARCB1-202ENST00000344921 A0A1B0GVY2 172 aa13.9□□□□□ -0.18
SMARCB1-202ENST00000344921 EREGO14944 169 aa13.9□□□□□ -0.18
SMARCB1-202ENST00000344921 MT-ND6P03923 174 aa13.9□□□□□ -0.18
SMARCB1-202ENST00000344921 REG3AQ06141 175 aa13.9□□□□□ -0.18
SMARCB1-202ENST00000344921 TMEM101Q96IK0 257 aa13.9□□□□□ -0.18
SMARCB1-202ENST00000344921 PACRGQ96M98 296 aaPredicted RBP13.9□□□□□ -0.18
SMARCB1-202ENST00000344921 C1orf43Q9BWL3 253 aa13.9□□□□□ -0.18
SMARCB1-202ENST00000344921 MIAQ16674 131 aa13.89□□□□□ -0.19
SMARCB1-202ENST00000344921 HIST1H2BLQ99880 126 aa13.89□□□□□ -0.19
SMARCB1-202ENST00000344921 MRPL18Q9H0U6 180 aaKnown RBP13.89□□□□□ -0.19
SMARCB1-202ENST00000344921 EPPK1P58107 5090 aaKnown RBP13.88□□□□□ -0.19
SMARCB1-202ENST00000344921 ZNF25P17030 456 aaPredicted RBP13.88□□□□□ -0.19
SMARCB1-202ENST00000344921 JOSD1Q15040 202 aaPredicted RBP13.88□□□□□ -0.19
SMARCB1-202ENST00000344921 TMEM18Q96B42 140 aa13.88□□□□□ -0.19
SMARCB1-202ENST00000344921 PRR34Q9NV39 138 aa13.88□□□□□ -0.19
SMARCB1-202ENST00000344921 IGKV3OR2-268A0A0C4DH90 116 aa13.87□□□□□ -0.19
SMARCB1-202ENST00000344921 PRSS47A8MTI9 375 aa13.87□□□□□ -0.19
SMARCB1-202ENST00000344921 FABP4P15090 132 aa13.87□□□□□ -0.19
SMARCB1-202ENST00000344921 SMAGPQ0VAQ4 97 aa13.87□□□□□ -0.19
SMARCB1-202ENST00000344921 DGAT2L7PQ6IED9 249 aa13.87□□□□□ -0.19
SMARCB1-202ENST00000344921 OR5A1Q8NGJ0 315 aa13.87□□□□□ -0.19
SMARCB1-202ENST00000344921 A0A087WTM6 91 aa13.86□□□□□ -0.19
SMARCB1-202ENST00000344921 TRAPPC1Q9Y5R8 145 aa13.86□□□□□ -0.19
SMARCB1-202ENST00000344921 IGLV10-54A0A075B6I4 117 aa13.84□□□□□ -0.19
SMARCB1-202ENST00000344921 DDTP30046 118 aa13.84□□□□□ -0.19
SMARCB1-202ENST00000344921 Q8N8P6 123 aa13.84□□□□□ -0.19
SMARCB1-202ENST00000344921 SPATA12Q7Z6I5 190 aa13.84□□□□□ -0.19
SMARCB1-202ENST00000344921 MRPL52Q86TS9 123 aaKnown RBP13.84□□□□□ -0.19
SMARCB1-202ENST00000344921 C14orf144Q96I85 54 aa13.84□□□□□ -0.19
SMARCB1-202ENST00000344921 HECTD4Q9Y4D8 3996 aa13.83□□□□□ -0.2
SMARCB1-202ENST00000344921 NXT2Q9NPJ8 142 aaKnown RBP13.83□□□□□ -0.2
SMARCB1-202ENST00000344921 PKD1P98161 4303 aa13.83□□□□□ -0.2
SMARCB1-202ENST00000344921 TRAV8-4A0A0B4J246 113 aa13.82□□□□□ -0.2
SMARCB1-202ENST00000344921 RPL39P62891 51 aaKnown RBP13.82□□□□□ -0.2
SMARCB1-202ENST00000344921 BAALCQ8WXS3 180 aa13.82□□□□□ -0.2
SMARCB1-202ENST00000344921 ALKBH7Q9BT30 221 aaPredicted RBP13.82□□□□□ -0.2
SMARCB1-202ENST00000344921 UBE2D4Q9Y2X8 147 aa13.82□□□□□ -0.2
SMARCB1-202ENST00000344921 LRCOL1A6NCL2 159 aa13.81□□□□□ -0.2
SMARCB1-202ENST00000344921 LECT2O14960 151 aa13.81□□□□□ -0.2
SMARCB1-202ENST00000344921 IFI27P40305 119 aaPredicted RBP13.81□□□□□ -0.2
SMARCB1-202ENST00000344921 MAPKAPK5-AS1Q8N8E1 139 aa13.81□□□□□ -0.2
SMARCB1-202ENST00000344921 ZNF664Q8N3J9 261 aa13.81□□□□□ -0.2
SMARCB1-202ENST00000344921 PRSS3P2Q8NHM4 247 aa13.81□□□□□ -0.2
SMARCB1-202ENST00000344921 PDZD11Q5EBL8 140 aa13.8□□□□□ -0.2
SMARCB1-202ENST00000344921 CDPF1Q6NVV7 123 aa13.8□□□□□ -0.2
SMARCB1-202ENST00000344921 CDC42SE2Q9NRR3 84 aa13.8□□□□□ -0.2
SMARCB1-202ENST00000344921 CSDC2Q9Y534 153 aaKnown RBP13.79□□□□□ -0.2
SMARCB1-202ENST00000344921 KRTAP10-2P60368 255 aa13.78□□□□□ -0.2
SMARCB1-202ENST00000344921 ORMDL2Q53FV1 153 aa13.78□□□□□ -0.2
SMARCB1-202ENST00000344921 C2orf88Q9BSF0 95 aa13.78□□□□□ -0.2
SMARCB1-202ENST00000344921 K7EMI3 77 aa13.78□□□□□ -0.2
SMARCB1-202ENST00000344921 TIMM21Q9BVV7 248 aa13.78□□□□□ -0.2
SMARCB1-202ENST00000344921 WFDC2Q14508 124 aa13.77□□□□□ -0.21
SMARCB1-202ENST00000344921 RNASE13Q5GAN3 156 aaKnown RBP13.77□□□□□ -0.21
SMARCB1-202ENST00000344921 C16orf90A8MZG2 172 aa13.76□□□□□ -0.21
SMARCB1-202ENST00000344921 FUSP35637 526 aaKnown RBP eCLIP13.76□□□□□ -0.21
SMARCB1-202ENST00000344921 Q8N814 137 aa13.76□□□□□ -0.21
SMARCB1-202ENST00000344921 SPANXA1Q9NS26 97 aa13.76□□□□□ -0.21
SMARCB1-202ENST00000344921 PGPEP1Q9NXJ5 209 aa13.76□□□□□ -0.21
SMARCB1-202ENST00000344921 Q6ZUT4 128 aa13.75□□□□□ -0.21
SMARCB1-202ENST00000344921 CHCHD10Q8WYQ3 142 aaPredicted RBP13.75□□□□□ -0.21
SMARCB1-202ENST00000344921 CYSLTR1Q9Y271 337 aa13.75□□□□□ -0.21
SMARCB1-202ENST00000344921 DNAH11Q96DT5 4516 aa13.74□□□□□ -0.21
SMARCB1-202ENST00000344921 LINC00959A0A1B0GUT2 108 aa13.74□□□□□ -0.21
SMARCB1-202ENST00000344921 SS18Q15532 418 aa13.74□□□□□ -0.21
SMARCB1-202ENST00000344921 KRTAP26-1Q6PEX3 210 aa13.74□□□□□ -0.21
SMARCB1-202ENST00000344921 C2orf66Q6UXQ4 117 aa13.74□□□□□ -0.21
SMARCB1-202ENST00000344921 PKHD1P08F94 4074 aa13.74□□□□□ -0.21
SMARCB1-202ENST00000344921 GAGE12HA6NDE8 117 aa13.73□□□□□ -0.21
SMARCB1-202ENST00000344921 FA2HQ7L5A8 372 aa13.73□□□□□ -0.21
SMARCB1-202ENST00000344921 G0S2P27469 103 aa13.73□□□□□ -0.21
SMARCB1-202ENST00000344921 OPRPNQ99935 248 aaPredicted RBP13.73□□□□□ -0.21
SMARCB1-202ENST00000344921 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.72□□□□□ -0.21
SMARCB1-202ENST00000344921 XCL1P47992 114 aa13.72□□□□□ -0.21
SMARCB1-202ENST00000344921 TRAV13-1A0A0B4J241 112 aa13.71□□□□□ -0.21
SMARCB1-202ENST00000344921 USP17L23D6RBM5 183 aa13.71□□□□□ -0.21
SMARCB1-202ENST00000344921 CCL25O15444 150 aa13.71□□□□□ -0.21
SMARCB1-202ENST00000344921 IGLV5-52A0A0A0MRZ9 124 aa13.7□□□□□ -0.22
SMARCB1-202ENST00000344921 C14orf177Q52M58 125 aa13.7□□□□□ -0.22
SMARCB1-202ENST00000344921 C18orf32Q8TCD1 76 aa13.7□□□□□ -0.22
SMARCB1-202ENST00000344921 PYGO1Q9Y3Y4 419 aa13.7□□□□□ -0.22
SMARCB1-202ENST00000344921 MRPS36P82909 103 aaKnown RBP13.7□□□□□ -0.22
SMARCB1-202ENST00000344921 NTN5Q8WTR8 489 aaPredicted RBP13.7□□□□□ -0.22
SMARCB1-202ENST00000344921 PRO1933Q9H354 126 aa13.7□□□□□ -0.22
SMARCB1-202ENST00000344921 TMEM141Q96I45 108 aa13.67□□□□□ -0.22
SMARCB1-202ENST00000344921 IGLV4-3A0A075B6K6 122 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms