RNA–Protein interactions for RNA: ENST00000344550.4

CEACAM3-201, Transcript of carcinoembryonic antigen related cell adhesion molecule 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CEACAM3, Length 1,022 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3-201ENST00000344550 CIRBPQ14011 172 aaKnown RBP12.89□□□□□ -0.35
CEACAM3-201ENST00000344550 KIR2DL4Q99706 377 aa12.89□□□□□ -0.35
CEACAM3-201ENST00000344550 C20orf78Q9BR46 151 aa12.89□□□□□ -0.35
CEACAM3-201ENST00000344550 TMEM242Q9NWH2 141 aa12.89□□□□□ -0.35
CEACAM3-201ENST00000344550 TRBV24-1A0A075B6N3 115 aa12.88□□□□□ -0.35
CEACAM3-201ENST00000344550 CCL25O15444 150 aa12.88□□□□□ -0.35
CEACAM3-201ENST00000344550 RPL32P62910 135 aaKnown RBP12.88□□□□□ -0.35
CEACAM3-201ENST00000344550 NRACQ8N912 160 aa12.88□□□□□ -0.35
CEACAM3-201ENST00000344550 F8W036 122 aa12.87□□□□□ -0.35
CEACAM3-201ENST00000344550 FCER1GP30273 86 aa12.87□□□□□ -0.35
CEACAM3-201ENST00000344550 C15orf56Q8N910 161 aa12.87□□□□□ -0.35
CEACAM3-201ENST00000344550 CDC42SE2Q9NRR3 84 aa12.87□□□□□ -0.35
CEACAM3-201ENST00000344550 MYCBP2O75592 4640 aa12.86□□□□□ -0.35
CEACAM3-201ENST00000344550 GVQW2A0A096LPI5 108 aaPredicted RBP12.86□□□□□ -0.35
CEACAM3-201ENST00000344550 IGKV3OR2-268A0A0C4DH90 116 aa12.86□□□□□ -0.35
CEACAM3-201ENST00000344550 LINC00959A0A1B0GUT2 108 aa12.85□□□□□ -0.35
CEACAM3-201ENST00000344550 SS18Q15532 418 aa12.85□□□□□ -0.35
CEACAM3-201ENST00000344550 MRPL51Q4U2R6 128 aaKnown RBP12.85□□□□□ -0.35
CEACAM3-201ENST00000344550 ZNF664Q8N3J9 261 aa12.85□□□□□ -0.35
CEACAM3-201ENST00000344550 TMEM18Q96B42 140 aa12.85□□□□□ -0.35
CEACAM3-201ENST00000344550 PPBPP02775 128 aa12.84□□□□□ -0.35
CEACAM3-201ENST00000344550 SLPIP03973 132 aa12.84□□□□□ -0.35
CEACAM3-201ENST00000344550 KRTAP10-4P60372 401 aaPredicted RBP12.84□□□□□ -0.35
CEACAM3-201ENST00000344550 HBBP68871 147 aa12.84□□□□□ -0.35
CEACAM3-201ENST00000344550 FOXI1Q12951 378 aa12.84□□□□□ -0.35
CEACAM3-201ENST00000344550 PKIGQ9Y2B9 76 aa12.84□□□□□ -0.35
CEACAM3-201ENST00000344550 PHOX2AO14813 284 aa12.83□□□□□ -0.36
CEACAM3-201ENST00000344550 CKS2P33552 79 aa12.83□□□□□ -0.36
CEACAM3-201ENST00000344550 CAMPP49913 170 aa12.83□□□□□ -0.36
CEACAM3-201ENST00000344550 RAB14P61106 215 aa12.83□□□□□ -0.36
CEACAM3-201ENST00000344550 PNRC1Q12796 327 aaPredicted RBP12.83□□□□□ -0.36
CEACAM3-201ENST00000344550 ATP5L2Q7Z4Y8 100 aa12.83□□□□□ -0.36
CEACAM3-201ENST00000344550 TIMM21Q9BVV7 248 aa12.83□□□□□ -0.36
CEACAM3-201ENST00000344550 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.83□□□□□ -0.36
CEACAM3-201ENST00000344550 A0A1B0GXF2 115 aa12.82□□□□□ -0.36
CEACAM3-201ENST00000344550 KRTAP29-1A8MX34 341 aaPredicted RBP12.82□□□□□ -0.36
CEACAM3-201ENST00000344550 SMKR1H3BMG3 65 aa12.82□□□□□ -0.36
CEACAM3-201ENST00000344550 CD164L2Q6UWJ8 174 aa12.82□□□□□ -0.36
CEACAM3-201ENST00000344550 IGHV1-58A0A0C4DH39 117 aa12.81□□□□□ -0.36
CEACAM3-201ENST00000344550 C1orf196B1AJZ1 125 aa12.81□□□□□ -0.36
CEACAM3-201ENST00000344550 XCL1P47992 114 aa12.8□□□□□ -0.36
CEACAM3-201ENST00000344550 UBE2D4Q9Y2X8 147 aa12.8□□□□□ -0.36
CEACAM3-201ENST00000344550 RPL37AP61513 92 aaKnown RBP12.79□□□□□ -0.36
CEACAM3-201ENST00000344550 J3QL48 77 aa12.78□□□□□ -0.36
CEACAM3-201ENST00000344550 TNFRSF6BO95407 300 aa12.78□□□□□ -0.36
CEACAM3-201ENST00000344550 SPACA4Q8TDM5 124 aa12.78□□□□□ -0.36
CEACAM3-201ENST00000344550 PANO1I0J062 215 aa12.77□□□□□ -0.37
CEACAM3-201ENST00000344550 HIGD2BQ4VC39 106 aa12.77□□□□□ -0.37
CEACAM3-201ENST00000344550 MRPL54Q6P161 138 aaKnown RBP12.77□□□□□ -0.37
CEACAM3-201ENST00000344550 ANAPC16Q96DE5 110 aa12.77□□□□□ -0.37
CEACAM3-201ENST00000344550 DPH3Q96FX2 82 aa12.77□□□□□ -0.37
CEACAM3-201ENST00000344550 SMIM2Q9BVW6 85 aa12.77□□□□□ -0.37
CEACAM3-201ENST00000344550 LINC00474Q9P2X8 69 aa12.77□□□□□ -0.37
CEACAM3-201ENST00000344550 HERC1Q15751 4861 aa12.77□□□□□ -0.37
CEACAM3-201ENST00000344550 OXTP01178 125 aa12.76□□□□□ -0.37
CEACAM3-201ENST00000344550 MT-ND4LP03901 98 aa12.76□□□□□ -0.37
CEACAM3-201ENST00000344550 PLAC8Q9NZF1 115 aa12.76□□□□□ -0.37
CEACAM3-201ENST00000344550 D6R8Y8 96 aa12.75□□□□□ -0.37
CEACAM3-201ENST00000344550 ORMDL3Q8N138 153 aa12.75□□□□□ -0.37
CEACAM3-201ENST00000344550 SPANXA1Q9NS26 97 aa12.75□□□□□ -0.37
CEACAM3-201ENST00000344550 LAMTOR2Q9Y2Q5 125 aa12.75□□□□□ -0.37
CEACAM3-201ENST00000344550 A0A087WYN8 130 aa12.74□□□□□ -0.37
CEACAM3-201ENST00000344550 COX6A2Q02221 97 aa12.74□□□□□ -0.37
CEACAM3-201ENST00000344550 ZNF561-AS1K7EIQ3 104 aa12.73□□□□□ -0.37
CEACAM3-201ENST00000344550 COX7A2LO14548 114 aa12.73□□□□□ -0.37
CEACAM3-201ENST00000344550 PRSS47A8MTI9 375 aa12.72□□□□□ -0.37
CEACAM3-201ENST00000344550 MRPS36P82909 103 aaKnown RBP12.72□□□□□ -0.37
CEACAM3-201ENST00000344550 CLLU1Q5K131 121 aa12.72□□□□□ -0.37
CEACAM3-201ENST00000344550 TMEM136Q6ZRR5 245 aa12.72□□□□□ -0.37
CEACAM3-201ENST00000344550 MALP21145 153 aa12.71□□□□□ -0.37
CEACAM3-201ENST00000344550 APOMO95445 188 aa12.7□□□□□ -0.38
CEACAM3-201ENST00000344550 NPYP01303 97 aa12.7□□□□□ -0.38
CEACAM3-201ENST00000344550 CHTF8P0CG12 524 aa12.7□□□□□ -0.38
CEACAM3-201ENST00000344550 RAB5AP20339 215 aa12.7□□□□□ -0.38
CEACAM3-201ENST00000344550 PRSS3P2Q8NHM4 247 aa12.7□□□□□ -0.38
CEACAM3-201ENST00000344550 CARD19Q96LW7 228 aa12.7□□□□□ -0.38
CEACAM3-201ENST00000344550 TRAV13-1A0A0B4J241 112 aa12.69□□□□□ -0.38
CEACAM3-201ENST00000344550 SYCNQ0VAF6 134 aa12.69□□□□□ -0.38
CEACAM3-201ENST00000344550 Q6ZUT4 128 aa12.69□□□□□ -0.38
CEACAM3-201ENST00000344550 C7orf33Q8WU49 177 aa12.69□□□□□ -0.38
CEACAM3-201ENST00000344550 PRELID3AQ96N28 172 aa12.69□□□□□ -0.38
CEACAM3-201ENST00000344550 UQCC3Q6UW78 93 aa12.68□□□□□ -0.38
CEACAM3-201ENST00000344550 C2orf48Q96LS8 159 aa12.68□□□□□ -0.38
CEACAM3-201ENST00000344550 IMMP2LQ96T52 175 aa12.68□□□□□ -0.38
CEACAM3-201ENST00000344550 PYGO1Q9Y3Y4 419 aa12.68□□□□□ -0.38
CEACAM3-201ENST00000344550 F8WDY8 70 aa12.67□□□□□ -0.38
CEACAM3-201ENST00000344550 MAJINQ3KP22 176 aa12.67□□□□□ -0.38
CEACAM3-201ENST00000344550 K7EMI3 77 aa12.66□□□□□ -0.38
CEACAM3-201ENST00000344550 RPL39P62891 51 aaKnown RBP12.66□□□□□ -0.38
CEACAM3-201ENST00000344550 IGLV4-69A0A075B6H9 119 aa12.65□□□□□ -0.38
CEACAM3-201ENST00000344550 Q6ZRU5 148 aa12.65□□□□□ -0.38
CEACAM3-201ENST00000344550 OR10D4PQ8NGN7 298 aa12.65□□□□□ -0.38
CEACAM3-201ENST00000344550 A0A096LNI7 61 aa12.64□□□□□ -0.39
CEACAM3-201ENST00000344550 IGKV2-24A0A0C4DH68 120 aa12.64□□□□□ -0.39
CEACAM3-201ENST00000344550 IFI27P40305 119 aaPredicted RBP12.64□□□□□ -0.39
CEACAM3-201ENST00000344550 RNASE13Q5GAN3 156 aaKnown RBP12.64□□□□□ -0.39
CEACAM3-201ENST00000344550 STPG4Q8N801 248 aa12.64□□□□□ -0.39
CEACAM3-201ENST00000344550 FAM104AQ969W3 186 aa12.64□□□□□ -0.39
CEACAM3-201ENST00000344550 MAP1LC3AQ9H492 121 aa12.64□□□□□ -0.39
CEACAM3-201ENST00000344550 IGHV3OR16-9A0A0B4J2B5 98 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms