RNA–Protein interactions for RNA: ENST00000341947.6

COL11A2-201, Transcript of collagen type XI alpha 2 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL11A2, Length 6,425 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2-201ENST00000341947 PRR15LQ9BU68 103 aa11.27□□□□□ -0.61
COL11A2-201ENST00000341947 PYGO1Q9Y3Y4 419 aa11.26□□□□□ -0.61
COL11A2-201ENST00000341947 HRCT1Q6UXD1 115 aa11.26□□□□□ -0.61
COL11A2-201ENST00000341947 CLUHP3Q96NS8 147 aa11.25□□□□□ -0.61
COL11A2-201ENST00000341947 Q6ZPA2 131 aa11.25□□□□□ -0.61
COL11A2-201ENST00000341947 COL4A3Q01955 1670 aa11.25□□□□□ -0.61
COL11A2-201ENST00000341947 CREBBPQ92793 2442 aa11.25□□□□□ -0.61
COL11A2-201ENST00000341947 C3orf84H3BNL1 204 aa11.25□□□□□ -0.61
COL11A2-201ENST00000341947 TRIAP1O43715 76 aa11.25□□□□□ -0.61
COL11A2-201ENST00000341947 CRIP1P50238 77 aa11.25□□□□□ -0.61
COL11A2-201ENST00000341947 RNF185Q96GF1 192 aa11.25□□□□□ -0.61
COL11A2-201ENST00000341947 U3KQK5 164 aa11.25□□□□□ -0.61
COL11A2-201ENST00000341947 DENND4AQ7Z401 1863 aa11.24□□□□□ -0.61
COL11A2-201ENST00000341947 TRBV30A0A0K0K1B3 111 aa11.24□□□□□ -0.61
COL11A2-201ENST00000341947 MPLKIPQ8TAP9 179 aa11.24□□□□□ -0.61
COL11A2-201ENST00000341947 TRBV6-5A0A0K0K1A5 114 aa11.24□□□□□ -0.61
COL11A2-201ENST00000341947 FAM236DA0A1B0GTK5 79 aa11.24□□□□□ -0.61
COL11A2-201ENST00000341947 FAM236CP0DP71 79 aa11.24□□□□□ -0.61
COL11A2-201ENST00000341947 TRBV27A0A0K0K1C4 114 aa11.23□□□□□ -0.61
COL11A2-201ENST00000341947 WFDC10AQ9H1F0 79 aa11.23□□□□□ -0.61
COL11A2-201ENST00000341947 LINC00474Q9P2X8 69 aa11.23□□□□□ -0.61
COL11A2-201ENST00000341947 C18orf65Q6ZTR6 163 aa11.23□□□□□ -0.61
COL11A2-201ENST00000341947 C2orf16Q68DN1 1984 aa11.23□□□□□ -0.61
COL11A2-201ENST00000341947 MBD6Q96DN6 1003 aa11.23□□□□□ -0.61
COL11A2-201ENST00000341947 TSHBP01222 138 aa11.23□□□□□ -0.61
COL11A2-201ENST00000341947 LOC100131303A0A0U1RQF7 123 aa11.22□□□□□ -0.61
COL11A2-201ENST00000341947 LINC00959A0A1B0GUT2 108 aa11.22□□□□□ -0.61
COL11A2-201ENST00000341947 ZNF295-AS1Q8N0V1 137 aa11.22□□□□□ -0.61
COL11A2-201ENST00000341947 PLAC8L1A1L4L8 177 aa11.22□□□□□ -0.61
COL11A2-201ENST00000341947 TIMM17BO60830 172 aa11.22□□□□□ -0.61
COL11A2-201ENST00000341947 LINC00526Q96FQ7 95 aa11.22□□□□□ -0.61
COL11A2-201ENST00000341947 A0A0J9YWU9 116 aa11.22□□□□□ -0.61
COL11A2-201ENST00000341947 Q8N6K4 173 aa11.21□□□□□ -0.61
COL11A2-201ENST00000341947 UQCRQO14949 82 aa11.21□□□□□ -0.62
COL11A2-201ENST00000341947 IGLV9-49A0A0B4J1Y8 123 aa11.2□□□□□ -0.62
COL11A2-201ENST00000341947 NDUFV3P56181 108 aaKnown RBP11.2□□□□□ -0.62
COL11A2-201ENST00000341947 NANOS2P60321 138 aaKnown RBP11.2□□□□□ -0.62
COL11A2-201ENST00000341947 RPL37AP8A6NKH3 93 aa11.2□□□□□ -0.62
COL11A2-201ENST00000341947 MAPKAPK5-AS1Q8N8E1 139 aa11.2□□□□□ -0.62
COL11A2-201ENST00000341947 PLCE1Q9P212 2302 aa11.2□□□□□ -0.62
COL11A2-201ENST00000341947 Q6ZQY7 126 aa11.19□□□□□ -0.62
COL11A2-201ENST00000341947 HIVEP2P31629 2446 aa11.19□□□□□ -0.62
COL11A2-201ENST00000341947 SHANK1Q9Y566 2161 aa11.19□□□□□ -0.62
COL11A2-201ENST00000341947 RNASE3P12724 160 aaKnown RBP11.19□□□□□ -0.62
COL11A2-201ENST00000341947 WFDC13Q8IUB5 93 aa11.19□□□□□ -0.62
COL11A2-201ENST00000341947 IGLV1-40P01703 118 aa11.19□□□□□ -0.62
COL11A2-201ENST00000341947 A8MZ25 164 aa11.18□□□□□ -0.62
COL11A2-201ENST00000341947 PLA2G2AP14555 144 aa11.18□□□□□ -0.62
COL11A2-201ENST00000341947 COX17Q14061 63 aa11.18□□□□□ -0.62
COL11A2-201ENST00000341947 CRIP3Q6Q6R5 217 aa11.18□□□□□ -0.62
COL11A2-201ENST00000341947 MED13LQ71F56 2210 aa11.18□□□□□ -0.62
COL11A2-201ENST00000341947 UBE2D2P62837 147 aa11.18□□□□□ -0.62
COL11A2-201ENST00000341947 MRPS36P82909 103 aaKnown RBP11.18□□□□□ -0.62
COL11A2-201ENST00000341947 MT-ATP8P03928 68 aa11.18□□□□□ -0.62
COL11A2-201ENST00000341947 ZNF106Q9H2Y7 1883 aaKnown RBP11.17□□□□□ -0.62
COL11A2-201ENST00000341947 ZFHX2Q9C0A1 2572 aaPredicted RBP11.17□□□□□ -0.62
COL11A2-201ENST00000341947 KLLNB2CW77 178 aa11.17□□□□□ -0.62
COL11A2-201ENST00000341947 MRGPRG-AS1Q2M3A8 158 aa11.17□□□□□ -0.62
COL11A2-201ENST00000341947 FAM208BQ5VWN6 2430 aa11.17□□□□□ -0.62
COL11A2-201ENST00000341947 NDUFC2-KCTD14E9PQ53 114 aa11.17□□□□□ -0.62
COL11A2-201ENST00000341947 IGLV2-11P01706 119 aa11.17□□□□□ -0.62
COL11A2-201ENST00000341947 LTBP2Q14767 1821 aa11.16□□□□□ -0.62
COL11A2-201ENST00000341947 SERP1Q9Y6X1 66 aa11.16□□□□□ -0.62
COL11A2-201ENST00000341947 PRR9Q5T870 116 aa11.16□□□□□ -0.62
COL11A2-201ENST00000341947 NUPR2A6NF83 97 aa11.16□□□□□ -0.62
COL11A2-201ENST00000341947 NDUFA7O95182 113 aa11.15□□□□□ -0.62
COL11A2-201ENST00000341947 IGHV4-30-4P0DP06 118 aa11.15□□□□□ -0.62
COL11A2-201ENST00000341947 V9GYY9 64 aa11.15□□□□□ -0.62
COL11A2-201ENST00000341947 TECTAO75443 2155 aa11.15□□□□□ -0.62
COL11A2-201ENST00000341947 NRACQ8N912 160 aa11.15□□□□□ -0.62
COL11A2-201ENST00000341947 ZNF73O43830 326 aaPredicted RBP11.15□□□□□ -0.62
COL11A2-201ENST00000341947 OXLD1Q5BKU9 147 aa11.14□□□□□ -0.63
COL11A2-201ENST00000341947 Q6ZS46 218 aa11.14□□□□□ -0.63
COL11A2-201ENST00000341947 Q8N9L7 120 aa11.14□□□□□ -0.63
COL11A2-201ENST00000341947 PRO3102Q9H379 93 aa11.14□□□□□ -0.63
COL11A2-201ENST00000341947 FAM240AA0A1B0GVK7 77 aa11.14□□□□□ -0.63
COL11A2-201ENST00000341947 MRPL55Q7Z7F7 128 aaKnown RBP11.14□□□□□ -0.63
COL11A2-201ENST00000341947 MUC7Q8TAX7 377 aa11.13□□□□□ -0.63
COL11A2-201ENST00000341947 SMIM11BQ8TCY0 68 aa11.13□□□□□ -0.63
COL11A2-201ENST00000341947 FAM19A3Q7Z5A8 133 aa11.13□□□□□ -0.63
COL11A2-201ENST00000341947 Q8IZM0 81 aa11.13□□□□□ -0.63
COL11A2-201ENST00000341947 PTPRQQ9UMZ3 2332 aa11.13□□□□□ -0.63
COL11A2-201ENST00000341947 ATP5EP56381 51 aaPredicted RBP11.13□□□□□ -0.63
COL11A2-201ENST00000341947 MUC6Q6W4X9 2439 aa11.13□□□□□ -0.63
COL11A2-201ENST00000341947 TNCP24821 2201 aa11.13□□□□□ -0.63
COL11A2-201ENST00000341947 C10orf25Q5T742 122 aa11.12□□□□□ -0.63
COL11A2-201ENST00000341947 MRPS12O15235 138 aaKnown RBP11.12□□□□□ -0.63
COL11A2-201ENST00000341947 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.12□□□□□ -0.63
COL11A2-201ENST00000341947 PRM2P04554 102 aa11.11□□□□□ -0.63
COL11A2-201ENST00000341947 NDUFC1O43677 76 aa11.11□□□□□ -0.63
COL11A2-201ENST00000341947 C11orf21Q9P2W6 132 aa11.11□□□□□ -0.63
COL11A2-201ENST00000341947 TP73-AS1Q9UF72 201 aa11.11□□□□□ -0.63
COL11A2-201ENST00000341947 RPL28P46779 137 aaKnown RBP11.1□□□□□ -0.63
COL11A2-201ENST00000341947 KIAA1549LQ6ZVL6 1849 aa11.1□□□□□ -0.63
COL11A2-201ENST00000341947 CYSRT1A8MQ03 144 aa11.1□□□□□ -0.63
COL11A2-201ENST00000341947 M0QXV9 152 aa11.1□□□□□ -0.63
COL11A2-201ENST00000341947 COL4A4P53420 1690 aaPredicted RBP11.09□□□□□ -0.63
COL11A2-201ENST00000341947 ALPK3Q96L96 1907 aa11.09□□□□□ -0.63
COL11A2-201ENST00000341947 POLR2KP53803 58 aaKnown RBP11.09□□□□□ -0.63
COL11A2-201ENST00000341947 CDC42SE2Q9NRR3 84 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms