RNA–Protein interactions for RNA: ENST00000340541.4

VAPA-201, Transcript of VAMP associated protein A, humanhuman

TSL 5 BASIC

Gene VAPA, Length 1,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-201ENST00000340541 LINC01620Q4KN68 170 aa10.02□□□□□ -0.81
VAPA-201ENST00000340541 C14orf177Q52M58 125 aa10.02□□□□□ -0.81
VAPA-201ENST00000340541 Q6ZSA8 131 aa10.02□□□□□ -0.81
VAPA-201ENST00000340541 MRPL52Q86TS9 123 aaKnown RBP10.02□□□□□ -0.81
VAPA-201ENST00000340541 COMMD7Q86VX2 200 aa10.02□□□□□ -0.81
VAPA-201ENST00000340541 FAT1Q14517 4588 aa10.02□□□□□ -0.81
VAPA-201ENST00000340541 SEC11CQ9BY50 192 aa10.01□□□□□ -0.81
VAPA-201ENST00000340541 VPS13BQ7Z7G8 4022 aa10.01□□□□□ -0.81
VAPA-201ENST00000340541 IGKV3OR2-268A0A0C4DH90 116 aa10□□□□□ -0.81
VAPA-201ENST00000340541 PPBPP02775 128 aa10□□□□□ -0.81
VAPA-201ENST00000340541 FCER1GP30273 86 aa10□□□□□ -0.81
VAPA-201ENST00000340541 HAMPP81172 84 aa10□□□□□ -0.81
VAPA-201ENST00000340541 KIR2DL4Q99706 377 aa10□□□□□ -0.81
VAPA-201ENST00000340541 SMIM2Q9BVW6 85 aa10□□□□□ -0.81
VAPA-201ENST00000340541 CDC42SE2Q9NRR3 84 aa10□□□□□ -0.81
VAPA-201ENST00000340541 PHOX2AO14813 284 aa9.99□□□□□ -0.81
VAPA-201ENST00000340541 C10orf91Q5T1B1 145 aa9.99□□□□□ -0.81
VAPA-201ENST00000340541 ORMDL3Q8N138 153 aa9.99□□□□□ -0.81
VAPA-201ENST00000340541 OR5A1Q8NGJ0 315 aa9.99□□□□□ -0.81
VAPA-201ENST00000340541 BTF3L4Q96K17 158 aa9.99□□□□□ -0.81
VAPA-201ENST00000340541 IMMP2LQ96T52 175 aa9.99□□□□□ -0.81
VAPA-201ENST00000340541 GAGE12HA6NDE8 117 aa9.98□□□□□ -0.81
VAPA-201ENST00000340541 TMEM136Q6ZRR5 245 aa9.98□□□□□ -0.81
VAPA-201ENST00000340541 CHCHD10Q8WYQ3 142 aaPredicted RBP9.98□□□□□ -0.81
VAPA-201ENST00000340541 TMEM101Q96IK0 257 aa9.98□□□□□ -0.81
VAPA-201ENST00000340541 CTDSP1Q9GZU7 261 aa9.98□□□□□ -0.81
VAPA-201ENST00000340541 UBE2D4Q9Y2X8 147 aa9.98□□□□□ -0.81
VAPA-201ENST00000340541 FLG2Q5D862 2391 aaPredicted RBP9.97□□□□□ -0.81
VAPA-201ENST00000340541 ZNF664Q8N3J9 261 aa9.97□□□□□ -0.81
VAPA-201ENST00000340541 PRELID3AQ96N28 172 aa9.97□□□□□ -0.81
VAPA-201ENST00000340541 CSDC2Q9Y534 153 aaKnown RBP9.97□□□□□ -0.81
VAPA-201ENST00000340541 LINC00959A0A1B0GUT2 108 aa9.96□□□□□ -0.82
VAPA-201ENST00000340541 PLA2G1BP04054 148 aaKnown RBP9.96□□□□□ -0.82
VAPA-201ENST00000340541 DGAT2L7PQ6IED9 249 aa9.96□□□□□ -0.82
VAPA-201ENST00000340541 C15orf56Q8N910 161 aa9.96□□□□□ -0.82
VAPA-201ENST00000340541 CLRN3Q8NCR9 226 aa9.96□□□□□ -0.82
VAPA-201ENST00000340541 PRSS47A8MTI9 375 aa9.95□□□□□ -0.82
VAPA-201ENST00000340541 FOXI1Q12951 378 aa9.95□□□□□ -0.82
VAPA-201ENST00000340541 FAM104AQ969W3 186 aa9.95□□□□□ -0.82
VAPA-201ENST00000340541 TIMM21Q9BVV7 248 aa9.95□□□□□ -0.82
VAPA-201ENST00000340541 CARHSP1Q9Y2V2 147 aaKnown RBP9.95□□□□□ -0.82
VAPA-201ENST00000340541 TCAPO15273 167 aa9.94□□□□□ -0.82
VAPA-201ENST00000340541 SLPIP03973 132 aa9.94□□□□□ -0.82
VAPA-201ENST00000340541 CNBPP62633 177 aaKnown RBP9.94□□□□□ -0.82
VAPA-201ENST00000340541 RPL39P62891 51 aaKnown RBP9.94□□□□□ -0.82
VAPA-201ENST00000340541 C9orf163Q8N9P6 203 aa9.94□□□□□ -0.82
VAPA-201ENST00000340541 LAMTOR2Q9Y2Q5 125 aa9.94□□□□□ -0.82
VAPA-201ENST00000340541 MYCBP2O75592 4640 aa9.94□□□□□ -0.82
VAPA-201ENST00000340541 TRAV9-1A0A075B6T8 112 aa9.93□□□□□ -0.82
VAPA-201ENST00000340541 hDV102S1A0JD36 115 aa9.93□□□□□ -0.82
VAPA-201ENST00000340541 CCL25O15444 150 aa9.93□□□□□ -0.82
VAPA-201ENST00000340541 XCL1P47992 114 aa9.93□□□□□ -0.82
VAPA-201ENST00000340541 Q6ZUT4 128 aa9.93□□□□□ -0.82
VAPA-201ENST00000340541 J3QL48 77 aa9.92□□□□□ -0.82
VAPA-201ENST00000340541 RNASE13Q5GAN3 156 aaKnown RBP9.92□□□□□ -0.82
VAPA-201ENST00000340541 TMEM18Q96B42 140 aa9.92□□□□□ -0.82
VAPA-201ENST00000340541 SMAGPQ0VAQ4 97 aa9.91□□□□□ -0.82
VAPA-201ENST00000340541 SS18Q15532 418 aa9.91□□□□□ -0.82
VAPA-201ENST00000340541 SCXQ7RTU7 201 aa9.91□□□□□ -0.82
VAPA-201ENST00000340541 GVQW2A0A096LPI5 108 aaPredicted RBP9.9□□□□□ -0.82
VAPA-201ENST00000340541 LOC389332A0A1B0GUA5 103 aa9.9□□□□□ -0.82
VAPA-201ENST00000340541 KRTAP29-1A8MX34 341 aaPredicted RBP9.9□□□□□ -0.82
VAPA-201ENST00000340541 CFAP161Q6P656 301 aa9.9□□□□□ -0.82
VAPA-201ENST00000340541 CD164L2Q6UWJ8 174 aa9.9□□□□□ -0.82
VAPA-201ENST00000340541 SDIM1Q6ZPB5 146 aa9.9□□□□□ -0.82
VAPA-201ENST00000340541 CHAC1Q9BUX1 264 aa9.9□□□□□ -0.82
VAPA-201ENST00000340541 MAP1LC3AQ9H492 121 aa9.9□□□□□ -0.82
VAPA-201ENST00000340541 SPANXA1Q9NS26 97 aa9.9□□□□□ -0.82
VAPA-201ENST00000340541 RHEBQ15382 184 aa9.89□□□□□ -0.83
VAPA-201ENST00000340541 HIGD2BQ4VC39 106 aa9.89□□□□□ -0.83
VAPA-201ENST00000340541 Q8N8P6 123 aa9.89□□□□□ -0.83
VAPA-201ENST00000340541 OPRPNQ99935 248 aaPredicted RBP9.89□□□□□ -0.83
VAPA-201ENST00000340541 C1orf196B1AJZ1 125 aa9.88□□□□□ -0.83
VAPA-201ENST00000340541 RAB5AP20339 215 aa9.88□□□□□ -0.83
VAPA-201ENST00000340541 MRPS36P82909 103 aaKnown RBP9.88□□□□□ -0.83
VAPA-201ENST00000340541 LINC00528Q8N1L1 170 aa9.88□□□□□ -0.83
VAPA-201ENST00000340541 CIRBP-AS1Q8TBR5 109 aa9.88□□□□□ -0.83
VAPA-201ENST00000340541 AP5S1Q9NUS5 200 aa9.88□□□□□ -0.83
VAPA-201ENST00000340541 TRAV13-1A0A0B4J241 112 aa9.87□□□□□ -0.83
VAPA-201ENST00000340541 PANO1I0J062 215 aa9.87□□□□□ -0.83
VAPA-201ENST00000340541 S100PP25815 95 aa9.87□□□□□ -0.83
VAPA-201ENST00000340541 KIAA1644Q3SXP7 199 aa9.87□□□□□ -0.83
VAPA-201ENST00000340541 RPS10P5Q9NQ39 176 aa9.87□□□□□ -0.83
VAPA-201ENST00000340541 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.87□□□□□ -0.83
VAPA-201ENST00000340541 GNB1LQ9BYB4 327 aa9.86□□□□□ -0.83
VAPA-201ENST00000340541 PYGO1Q9Y3Y4 419 aa9.86□□□□□ -0.83
VAPA-201ENST00000340541 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.85□□□□□ -0.83
VAPA-201ENST00000340541 IGHV1-58A0A0C4DH39 117 aa9.85□□□□□ -0.83
VAPA-201ENST00000340541 IGHV3-64A0A075B6Q5 118 aa9.84□□□□□ -0.83
VAPA-201ENST00000340541 APOC3P02656 99 aa9.84□□□□□ -0.83
VAPA-201ENST00000340541 IFI27P40305 119 aaPredicted RBP9.84□□□□□ -0.83
VAPA-201ENST00000340541 CIRBPQ14011 172 aaKnown RBP9.84□□□□□ -0.83
VAPA-201ENST00000340541 LINC00526Q96FQ7 95 aa9.84□□□□□ -0.83
VAPA-201ENST00000340541 NXT2Q9NPJ8 142 aaKnown RBP9.84□□□□□ -0.83
VAPA-201ENST00000340541 IGLV4-3A0A075B6K6 122 aa9.83□□□□□ -0.84
VAPA-201ENST00000340541 K7EMI3 77 aa9.83□□□□□ -0.84
VAPA-201ENST00000340541 COX7A2LO14548 114 aa9.83□□□□□ -0.84
VAPA-201ENST00000340541 C2orf66Q6UXQ4 117 aa9.83□□□□□ -0.84
VAPA-201ENST00000340541 COX19Q49B96 90 aa9.82□□□□□ -0.84
VAPA-201ENST00000340541 ORMDL2Q53FV1 153 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms