RNA–Protein interactions for RNA: ENST00000338910.8

PSPC1-201, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSPC1, Length 2,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-201ENST00000338910 A0A0J9YXV3 536 aa13.76□□□□□ -0.21
PSPC1-201ENST00000338910 C20orf203Q8NBC4 194 aa13.75□□□□□ -0.21
PSPC1-201ENST00000338910 LITAFQ99732 161 aa13.75□□□□□ -0.21
PSPC1-201ENST00000338910 TRAV12-2A0A075B6T6 113 aa13.74□□□□□ -0.21
PSPC1-201ENST00000338910 OTOGQ6ZRI0 2925 aa13.74□□□□□ -0.21
PSPC1-201ENST00000338910 IGLV4-3A0A075B6K6 122 aa13.73□□□□□ -0.21
PSPC1-201ENST00000338910 H7C423 109 aa13.73□□□□□ -0.21
PSPC1-201ENST00000338910 C2orf82Q6UX34 121 aa13.73□□□□□ -0.21
PSPC1-201ENST00000338910 C9orf85Q96MD7 179 aa13.73□□□□□ -0.21
PSPC1-201ENST00000338910 SMR3AQ99954 134 aa13.73□□□□□ -0.21
PSPC1-201ENST00000338910 HIVEP2P31629 2446 aa13.73□□□□□ -0.21
PSPC1-201ENST00000338910 ZNF56Q15929 161 aa13.73□□□□□ -0.21
PSPC1-201ENST00000338910 IGHV3-30-3P0DP02 117 aa13.72□□□□□ -0.21
PSPC1-201ENST00000338910 ICOSQ9Y6W8 199 aa13.72□□□□□ -0.21
PSPC1-201ENST00000338910 C11orf44Q8N8P7 122 aa13.72□□□□□ -0.21
PSPC1-201ENST00000338910 IGHV3-16A0A0C4DH30 117 aa13.71□□□□□ -0.21
PSPC1-201ENST00000338910 ADARB2-AS1A8MUL3 147 aa13.71□□□□□ -0.21
PSPC1-201ENST00000338910 H3BT86 120 aa13.71□□□□□ -0.21
PSPC1-201ENST00000338910 MRPL23Q16540 153 aaKnown RBP13.71□□□□□ -0.21
PSPC1-201ENST00000338910 C4orf3Q8WVX3 66 aa13.71□□□□□ -0.21
PSPC1-201ENST00000338910 SPINK13Q1W4C9 94 aa13.71□□□□□ -0.22
PSPC1-201ENST00000338910 ADAMTSL4-AS1Q5T5F5 129 aa13.69□□□□□ -0.22
PSPC1-201ENST00000338910 TIMM21Q9BVV7 248 aa13.69□□□□□ -0.22
PSPC1-201ENST00000338910 FAM240AA0A1B0GVK7 77 aa13.69□□□□□ -0.22
PSPC1-201ENST00000338910 I3L3M4 83 aa13.69□□□□□ -0.22
PSPC1-201ENST00000338910 PRSS2P07478 247 aa13.69□□□□□ -0.22
PSPC1-201ENST00000338910 SPANXDQ9BXN6 97 aa13.69□□□□□ -0.22
PSPC1-201ENST00000338910 SPANXA1Q9NS26 97 aa13.69□□□□□ -0.22
PSPC1-201ENST00000338910 SPANXCQ9NY87 97 aa13.69□□□□□ -0.22
PSPC1-201ENST00000338910 FAM104AQ969W3 186 aa13.68□□□□□ -0.22
PSPC1-201ENST00000338910 WNK1Q9H4A3 2382 aa13.68□□□□□ -0.22
PSPC1-201ENST00000338910 A0A1W2PRX2 142 aa13.67□□□□□ -0.22
PSPC1-201ENST00000338910 KNCNA6PVL3 124 aa13.67□□□□□ -0.22
PSPC1-201ENST00000338910 MRPS36P82909 103 aaKnown RBP13.67□□□□□ -0.22
PSPC1-201ENST00000338910 DEFB121Q5J5C9 76 aa13.67□□□□□ -0.22
PSPC1-201ENST00000338910 SMIM20Q8N5G0 67 aa13.67□□□□□ -0.22
PSPC1-201ENST00000338910 PEMTQ9UBM1 199 aa13.67□□□□□ -0.22
PSPC1-201ENST00000338910 TRAV8-3A0A0A6YYJ7 113 aa13.66□□□□□ -0.22
PSPC1-201ENST00000338910 COX6CP09669 75 aa13.66□□□□□ -0.22
PSPC1-201ENST00000338910 DEFB131AP59861 70 aa13.66□□□□□ -0.22
PSPC1-201ENST00000338910 TMEM61Q8N0U2 210 aa13.66□□□□□ -0.22
PSPC1-201ENST00000338910 SETXQ7Z333 2677 aaKnown RBP13.66□□□□□ -0.22
PSPC1-201ENST00000338910 LST1O00453 97 aa13.65□□□□□ -0.22
PSPC1-201ENST00000338910 MIAQ16674 131 aa13.65□□□□□ -0.22
PSPC1-201ENST00000338910 CLEC2BQ92478 149 aa13.65□□□□□ -0.22
PSPC1-201ENST00000338910 NDUFA12Q9UI09 145 aa13.65□□□□□ -0.22
PSPC1-201ENST00000338910 PYGO1Q9Y3Y4 419 aa13.65□□□□□ -0.22
PSPC1-201ENST00000338910 NIPBLQ6KC79 2804 aaeCLIP13.65□□□□□ -0.221e-5■□□□□ 11.1
PSPC1-201ENST00000338910 IGHV1-58A0A0C4DH39 117 aa13.64□□□□□ -0.23
PSPC1-201ENST00000338910 RNASE1P07998 156 aaKnown RBP13.64□□□□□ -0.23
PSPC1-201ENST00000338910 CD28P10747 220 aa13.63□□□□□ -0.23
PSPC1-201ENST00000338910 MEIG1Q5JSS6 88 aa13.63□□□□□ -0.23
PSPC1-201ENST00000338910 DYNLRB2Q8TF09 96 aa13.63□□□□□ -0.23
PSPC1-201ENST00000338910 TRBV7-7A0A0K0K1E9 115 aa13.63□□□□□ -0.23
PSPC1-201ENST00000338910 LINC01006Q8NI28 216 aa13.62□□□□□ -0.23
PSPC1-201ENST00000338910 IGHV1OR15-1A0A075B7D0 117 aa13.62□□□□□ -0.23
PSPC1-201ENST00000338910 TRGV11A0A075B6L2 103 aa13.61□□□□□ -0.23
PSPC1-201ENST00000338910 HTN1P15515 57 aa13.61□□□□□ -0.23
PSPC1-201ENST00000338910 DEFB114Q30KQ6 69 aa13.61□□□□□ -0.23
PSPC1-201ENST00000338910 VSIG2Q96IQ7 327 aa13.61□□□□□ -0.23
PSPC1-201ENST00000338910 LY6G6DO95868 133 aa13.61□□□□□ -0.23
PSPC1-201ENST00000338910 NPC2P61916 151 aa13.6□□□□□ -0.23
PSPC1-201ENST00000338910 HILS1P60008 231 aa13.6□□□□□ -0.23
PSPC1-201ENST00000338910 CEMP1Q6PRD7 247 aaPredicted RBP13.6□□□□□ -0.23
PSPC1-201ENST00000338910 CHCHD5Q9BSY4 110 aa13.6□□□□□ -0.23
PSPC1-201ENST00000338910 CITED2Q99967 270 aaPredicted RBP13.59□□□□□ -0.23
PSPC1-201ENST00000338910 A8MZ25 164 aa13.59□□□□□ -0.23
PSPC1-201ENST00000338910 RBMY1A1P0DJD3 496 aaKnown RBP13.59□□□□□ -0.23
PSPC1-201ENST00000338910 RBMY1CP0DJD4 496 aa13.59□□□□□ -0.23
PSPC1-201ENST00000338910 RBMY1FQ15415 496 aaKnown RBP13.59□□□□□ -0.23
PSPC1-201ENST00000338910 NSD1Q96L73 2696 aaPredicted RBP13.59□□□□□ -0.23
PSPC1-201ENST00000338910 HIVEP1P15822 2718 aa13.58□□□□□ -0.24
PSPC1-201ENST00000338910 CCL24O00175 119 aa13.58□□□□□ -0.24
PSPC1-201ENST00000338910 RNASE13Q5GAN3 156 aaKnown RBP13.58□□□□□ -0.24
PSPC1-201ENST00000338910 TINCRA0A1B0GVN0 87 aa13.57□□□□□ -0.24
PSPC1-201ENST00000338910 RBMY1BA6NDE4 496 aaKnown RBP13.57□□□□□ -0.24
PSPC1-201ENST00000338910 RBMY1EA6NEQ0 496 aaKnown RBP13.57□□□□□ -0.24
PSPC1-201ENST00000338910 PRM2P04554 102 aa13.57□□□□□ -0.24
PSPC1-201ENST00000338910 RBMY1DP0C7P1 496 aaKnown RBP13.57□□□□□ -0.24
PSPC1-201ENST00000338910 C16orf95Q9H693 158 aa13.57□□□□□ -0.24
PSPC1-201ENST00000338910 MAP6D1Q9H9H5 199 aa13.57□□□□□ -0.24
PSPC1-201ENST00000338910 EDA2RQ9HAV5 297 aa13.57□□□□□ -0.24
PSPC1-201ENST00000338910 TIMM17BO60830 172 aa13.56□□□□□ -0.24
PSPC1-201ENST00000338910 TMEM101Q96IK0 257 aa13.55□□□□□ -0.24
PSPC1-201ENST00000338910 LINC01587Q99440 93 aa13.55□□□□□ -0.24
PSPC1-201ENST00000338910 FLNBO75369 2602 aaKnown RBP13.55□□□□□ -0.24
PSPC1-201ENST00000338910 IMUPQ9GZP8 106 aa13.53□□□□□ -0.24
PSPC1-201ENST00000338910 TMEM126AQ9H061 195 aa13.53□□□□□ -0.24
PSPC1-201ENST00000338910 ACYP1P07311 99 aa13.52□□□□□ -0.24
PSPC1-201ENST00000338910 PROK1P58294 105 aa13.52□□□□□ -0.24
PSPC1-201ENST00000338910 DAND5Q8N907 189 aa13.52□□□□□ -0.24
PSPC1-201ENST00000338910 A8MTW9 85 aa13.52□□□□□ -0.25
PSPC1-201ENST00000338910 UBE2D4Q9Y2X8 147 aa13.52□□□□□ -0.25
PSPC1-201ENST00000338910 IGHV3-73A0A0B4J1V6 119 aa13.51□□□□□ -0.25
PSPC1-201ENST00000338910 CHCHD7Q9BUK0 85 aa13.51□□□□□ -0.25
PSPC1-201ENST00000338910 FAM236AA0A1B0GUQ0 79 aa13.51□□□□□ -0.25
PSPC1-201ENST00000338910 FAM236BA0A1B0GV22 79 aa13.51□□□□□ -0.25
PSPC1-201ENST00000338910 C5orf47Q569G3 176 aa13.51□□□□□ -0.25
PSPC1-201ENST00000338910 FN1P02751 2386 aaKnown RBP13.51□□□□□ -0.25
PSPC1-201ENST00000338910 INAFM1C9JVW0 142 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms