RNA–Protein interactions for RNA: ENST00000337571.8

CAPN3-202, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-202ENST00000337571 CIRBPQ14011 172 aaKnown RBP6.8□□□□□ -1.32
CAPN3-202ENST00000337571 GTSF1Q8WW33 167 aa6.8□□□□□ -1.32
CAPN3-202ENST00000337571 RPL39LQ96EH5 51 aaKnown RBP6.8□□□□□ -1.32
CAPN3-202ENST00000337571 LRP1Q07954 4544 aaKnown RBP6.8□□□□□ -1.32
CAPN3-202ENST00000337571 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.79□□□□□ -1.32
CAPN3-202ENST00000337571 IGKV2-29A2NJV5 120 aaPredicted RBP6.79□□□□□ -1.32
CAPN3-202ENST00000337571 SDHAF1A6NFY7 115 aa6.79□□□□□ -1.32
CAPN3-202ENST00000337571 F8W036 122 aa6.79□□□□□ -1.32
CAPN3-202ENST00000337571 SLPIP03973 132 aa6.79□□□□□ -1.32
CAPN3-202ENST00000337571 CHTF8P0CG12 524 aa6.79□□□□□ -1.32
CAPN3-202ENST00000337571 FGF6P10767 208 aa6.79□□□□□ -1.32
CAPN3-202ENST00000337571 ZNF25P17030 456 aaPredicted RBP6.79□□□□□ -1.32
CAPN3-202ENST00000337571 COX6A2Q02221 97 aa6.79□□□□□ -1.32
CAPN3-202ENST00000337571 Q6ZRU5 148 aa6.79□□□□□ -1.32
CAPN3-202ENST00000337571 C7orf33Q8WU49 177 aa6.79□□□□□ -1.32
CAPN3-202ENST00000337571 CHCHD10Q8WYQ3 142 aaPredicted RBP6.79□□□□□ -1.32
CAPN3-202ENST00000337571 APOC3P02656 99 aa6.78□□□□□ -1.32
CAPN3-202ENST00000337571 HNRNPA3P51991 378 aaKnown RBP6.78□□□□□ -1.32
CAPN3-202ENST00000337571 FOXA3P55318 350 aaPredicted RBP6.78□□□□□ -1.32
CAPN3-202ENST00000337571 HIGD2BQ4VC39 106 aa6.78□□□□□ -1.32
CAPN3-202ENST00000337571 FAM231DQ6ZW35 169 aa6.78□□□□□ -1.32
CAPN3-202ENST00000337571 C15orf56Q8N910 161 aa6.78□□□□□ -1.32
CAPN3-202ENST00000337571 SPACA4Q8TDM5 124 aa6.78□□□□□ -1.32
CAPN3-202ENST00000337571 ST20Q9HBF5 79 aa6.78□□□□□ -1.32
CAPN3-202ENST00000337571 FAT3Q8TDW7 4589 aa6.77□□□□□ -1.33
CAPN3-202ENST00000337571 MAJINQ3KP22 176 aa6.77□□□□□ -1.33
CAPN3-202ENST00000337571 OR5A1Q8NGJ0 315 aa6.77□□□□□ -1.33
CAPN3-202ENST00000337571 MRAP2Q96G30 205 aa6.77□□□□□ -1.33
CAPN3-202ENST00000337571 PLAC8Q9NZF1 115 aa6.77□□□□□ -1.33
CAPN3-202ENST00000337571 PKIGQ9Y2B9 76 aa6.77□□□□□ -1.33
CAPN3-202ENST00000337571 PKHD1L1Q86WI1 4243 aa6.77□□□□□ -1.33
CAPN3-202ENST00000337571 IGKV2-24A0A0C4DH68 120 aa6.76□□□□□ -1.33
CAPN3-202ENST00000337571 TRBV6-5A0A0K0K1A5 114 aa6.76□□□□□ -1.33
CAPN3-202ENST00000337571 XCL1P47992 114 aa6.76□□□□□ -1.33
CAPN3-202ENST00000337571 SS18Q15532 418 aa6.76□□□□□ -1.33
CAPN3-202ENST00000337571 CT83Q5H943 113 aa6.76□□□□□ -1.33
CAPN3-202ENST00000337571 GVQW2A0A096LPI5 108 aaPredicted RBP6.75□□□□□ -1.33
CAPN3-202ENST00000337571 LINC00959A0A1B0GUT2 108 aa6.75□□□□□ -1.33
CAPN3-202ENST00000337571 A0A1B0GUT8 65 aa6.75□□□□□ -1.33
CAPN3-202ENST00000337571 PHOX2AO14813 284 aa6.75□□□□□ -1.33
CAPN3-202ENST00000337571 SMAGPQ0VAQ4 97 aa6.75□□□□□ -1.33
CAPN3-202ENST00000337571 FAM74A3Q4VXF1 159 aa6.75□□□□□ -1.33
CAPN3-202ENST00000337571 STPG4Q8N801 248 aa6.75□□□□□ -1.33
CAPN3-202ENST00000337571 PRSS3P2Q8NHM4 247 aa6.75□□□□□ -1.33
CAPN3-202ENST00000337571 SMIM7Q9BQ49 75 aa6.75□□□□□ -1.33
CAPN3-202ENST00000337571 TMEM191AQ9H0A3 160 aa6.75□□□□□ -1.33
CAPN3-202ENST00000337571 LINC00474Q9P2X8 69 aa6.75□□□□□ -1.33
CAPN3-202ENST00000337571 IGHV1-58A0A0C4DH39 117 aa6.74□□□□□ -1.33
CAPN3-202ENST00000337571 FAM231BA6NCW3 169 aa6.74□□□□□ -1.33
CAPN3-202ENST00000337571 ZNF727A8MUV8 499 aa6.74□□□□□ -1.33
CAPN3-202ENST00000337571 HIGD1CA8MV81 97 aa6.74□□□□□ -1.33
CAPN3-202ENST00000337571 ZNF561-AS1K7EIQ3 104 aa6.74□□□□□ -1.33
CAPN3-202ENST00000337571 CCL25O15444 150 aa6.74□□□□□ -1.33
CAPN3-202ENST00000337571 FCER1GP30273 86 aa6.74□□□□□ -1.33
CAPN3-202ENST00000337571 FOXI1Q12951 378 aa6.74□□□□□ -1.33
CAPN3-202ENST00000337571 TSKUQ8WUA8 353 aa6.74□□□□□ -1.33
CAPN3-202ENST00000337571 C7orf77A4D0Y5 90 aa6.73□□□□□ -1.33
CAPN3-202ENST00000337571 VCYO14598 125 aa6.73□□□□□ -1.33
CAPN3-202ENST00000337571 PPP1R17O96001 155 aa6.73□□□□□ -1.33
CAPN3-202ENST00000337571 TSHBP01222 138 aa6.73□□□□□ -1.33
CAPN3-202ENST00000337571 ESDP10768 282 aa6.73□□□□□ -1.33
CAPN3-202ENST00000337571 RAB4AP20338 218 aa6.73□□□□□ -1.33
CAPN3-202ENST00000337571 RPL23P62829 140 aaKnown RBP6.73□□□□□ -1.33
CAPN3-202ENST00000337571 RIGQ13278 110 aa6.73□□□□□ -1.33
CAPN3-202ENST00000337571 LINC01551Q86U37 167 aa6.73□□□□□ -1.33
CAPN3-202ENST00000337571 SVBPQ8N300 66 aa6.73□□□□□ -1.33
CAPN3-202ENST00000337571 ZNF664Q8N3J9 261 aa6.73□□□□□ -1.33
CAPN3-202ENST00000337571 YPEL4Q96NS1 127 aa6.73□□□□□ -1.33
CAPN3-202ENST00000337571 OSTCQ9NRP0 149 aa6.73□□□□□ -1.33
CAPN3-202ENST00000337571 TMEM242Q9NWH2 141 aa6.73□□□□□ -1.33
CAPN3-202ENST00000337571 TRBV27A0A0K0K1C4 114 aa6.72□□□□□ -1.33
CAPN3-202ENST00000337571 MALP21145 153 aa6.72□□□□□ -1.33
CAPN3-202ENST00000337571 POLR2KP53803 58 aaKnown RBP6.72□□□□□ -1.33
CAPN3-202ENST00000337571 TMEM241Q24JQ0 296 aa6.72□□□□□ -1.33
CAPN3-202ENST00000337571 CD164L2Q6UWJ8 174 aa6.72□□□□□ -1.33
CAPN3-202ENST00000337571 CARD19Q96LW7 228 aa6.72□□□□□ -1.33
CAPN3-202ENST00000337571 KRTAP9-9Q9BYP9 154 aa6.72□□□□□ -1.33
CAPN3-202ENST00000337571 KRTAP9-4Q9BYQ2 154 aa6.72□□□□□ -1.33
CAPN3-202ENST00000337571 CDC42SE2Q9NRR3 84 aa6.72□□□□□ -1.33
CAPN3-202ENST00000337571 NAT8Q9UHE5 227 aa6.72□□□□□ -1.33
CAPN3-202ENST00000337571 HMCN2Q8NDA2 5059 aa6.71□□□□□ -1.33
CAPN3-202ENST00000337571 C1orf196B1AJZ1 125 aa6.71□□□□□ -1.34
CAPN3-202ENST00000337571 GAS8-AS1O95177 125 aa6.71□□□□□ -1.34
CAPN3-202ENST00000337571 SNAPINO95295 136 aa6.71□□□□□ -1.34
CAPN3-202ENST00000337571 MRPL52Q86TS9 123 aaKnown RBP6.71□□□□□ -1.34
CAPN3-202ENST00000337571 CBLN2Q8IUK8 224 aa6.71□□□□□ -1.34
CAPN3-202ENST00000337571 AMN1Q8IY45 258 aa6.71□□□□□ -1.34
CAPN3-202ENST00000337571 ISOC2Q96AB3 205 aa6.71□□□□□ -1.34
CAPN3-202ENST00000337571 LINC00526Q96FQ7 95 aa6.71□□□□□ -1.34
CAPN3-202ENST00000337571 KIR2DL4Q99706 377 aa6.71□□□□□ -1.34
CAPN3-202ENST00000337571 A0A096LNI7 61 aa6.7□□□□□ -1.34
CAPN3-202ENST00000337571 MT1HL1P0DM35 61 aa6.7□□□□□ -1.34
CAPN3-202ENST00000337571 SYCNQ0VAF6 134 aa6.7□□□□□ -1.34
CAPN3-202ENST00000337571 TMEM18Q96B42 140 aa6.7□□□□□ -1.34
CAPN3-202ENST00000337571 COX7A2LO14548 114 aa6.69□□□□□ -1.34
CAPN3-202ENST00000337571 PPP1R2P9O14990 202 aa6.69□□□□□ -1.34
CAPN3-202ENST00000337571 SUMO2P61956 95 aaKnown RBP6.69□□□□□ -1.34
CAPN3-202ENST00000337571 PRR3P79522 188 aaKnown RBP6.69□□□□□ -1.34
CAPN3-202ENST00000337571 ANKRD39Q53RE8 183 aa6.69□□□□□ -1.34
CAPN3-202ENST00000337571 NUP35Q8NFH5 326 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms