RNA–Protein interactions for RNA: ENST00000334060.8

SHOX-201, Transcript of short stature homeobox, humanhuman

TSL 5 BASIC

Gene SHOX, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-201ENST00000334060 TRBV6-4A0A1B0GX49 114 aa11.45□□□□□ -0.58
SHOX-201ENST00000334060 TAL2Q16559 108 aa11.45□□□□□ -0.58
SHOX-201ENST00000334060 CEMP1Q6PRD7 247 aaPredicted RBP11.45□□□□□ -0.58
SHOX-201ENST00000334060 LINC00694P0DN24 101 aa11.44□□□□□ -0.58
SHOX-201ENST00000334060 CKS2P33552 79 aa11.44□□□□□ -0.58
SHOX-201ENST00000334060 GAGE12HA6NDE8 117 aa11.43□□□□□ -0.58
SHOX-201ENST00000334060 RHOHQ15669 191 aa11.43□□□□□ -0.58
SHOX-201ENST00000334060 RPL24P83731 157 aaKnown RBP11.43□□□□□ -0.58
SHOX-201ENST00000334060 VCX2Q9H322 139 aa11.43□□□□□ -0.58
SHOX-201ENST00000334060 TNFRSF6BO95407 300 aa11.42□□□□□ -0.58
SHOX-201ENST00000334060 HBDP02042 147 aa11.42□□□□□ -0.58
SHOX-201ENST00000334060 LOC389332A0A1B0GUA5 103 aa11.41□□□□□ -0.58
SHOX-201ENST00000334060 PRELID3AQ96N28 172 aa11.41□□□□□ -0.58
SHOX-201ENST00000334060 APLNQ9ULZ1 77 aa11.41□□□□□ -0.58
SHOX-201ENST00000334060 MRAP2Q96G30 205 aa11.41□□□□□ -0.58
SHOX-201ENST00000334060 UBE2D3P61077 147 aa11.4□□□□□ -0.58
SHOX-201ENST00000334060 UBE2D2P62837 147 aa11.4□□□□□ -0.58
SHOX-201ENST00000334060 CASC10Q5T4H9 136 aa11.4□□□□□ -0.58
SHOX-201ENST00000334060 ORMDL3Q8N138 153 aa11.4□□□□□ -0.58
SHOX-201ENST00000334060 Q8N3U1 123 aa11.4□□□□□ -0.58
SHOX-201ENST00000334060 PRADC1Q9BSG0 188 aa11.4□□□□□ -0.58
SHOX-201ENST00000334060 TM2D2Q9BX73 214 aa11.4□□□□□ -0.58
SHOX-201ENST00000334060 SDHAF1A6NFY7 115 aa11.39□□□□□ -0.59
SHOX-201ENST00000334060 NTM-AS1Q6ZSK4 140 aa11.39□□□□□ -0.59
SHOX-201ENST00000334060 TP73-AS1Q9UF72 201 aa11.39□□□□□ -0.59
SHOX-201ENST00000334060 HYDINQ4G0P3 5121 aa11.39□□□□□ -0.59
SHOX-201ENST00000334060 TRBV7-3A0A075B6L6 115 aa11.39□□□□□ -0.59
SHOX-201ENST00000334060 H0Y8G0 127 aa11.39□□□□□ -0.59
SHOX-201ENST00000334060 ESRGQ1W209 222 aa11.39□□□□□ -0.59
SHOX-201ENST00000334060 IFI27L1Q96BM0 104 aa11.39□□□□□ -0.59
SHOX-201ENST00000334060 VPS13DQ5THJ4 4388 aa11.39□□□□□ -0.59
SHOX-201ENST00000334060 ATP6V0E2Q8NHE4 81 aa11.38□□□□□ -0.59
SHOX-201ENST00000334060 SPANXB1Q9NS25 103 aaPredicted RBP11.37□□□□□ -0.59
SHOX-201ENST00000334060 TNFRSF18Q9Y5U5 241 aa11.37□□□□□ -0.59
SHOX-201ENST00000334060 ICOSQ9Y6W8 199 aa11.37□□□□□ -0.59
SHOX-201ENST00000334060 KMT2CQ8NEZ4 4911 aaKnown RBP11.37□□□□□ -0.59
SHOX-201ENST00000334060 NUPR2A6NF83 97 aa11.37□□□□□ -0.59
SHOX-201ENST00000334060 LINC01546A6NGU7 62 aa11.37□□□□□ -0.59
SHOX-201ENST00000334060 E9PLD3 99 aa11.37□□□□□ -0.59
SHOX-201ENST00000334060 POLR2KP53803 58 aaKnown RBP11.37□□□□□ -0.59
SHOX-201ENST00000334060 CKS1BP61024 79 aa11.37□□□□□ -0.59
SHOX-201ENST00000334060 SUMO2P61956 95 aaKnown RBP11.37□□□□□ -0.59
SHOX-201ENST00000334060 RPL36AP83881 106 aaKnown RBP11.37□□□□□ -0.59
SHOX-201ENST00000334060 RPL36ALQ969Q0 106 aaKnown RBP11.37□□□□□ -0.59
SHOX-201ENST00000334060 KMT2AQ03164 3969 aa11.37□□□□□ -0.59
SHOX-201ENST00000334060 IGLV2-18A0A075B6J9 118 aa11.36□□□□□ -0.59
SHOX-201ENST00000334060 TRBV10-1A0A0K0K1A3 114 aa11.36□□□□□ -0.59
SHOX-201ENST00000334060 IFI27P40305 119 aaPredicted RBP11.36□□□□□ -0.59
SHOX-201ENST00000334060 ATP5LO75964 103 aa11.36□□□□□ -0.59
SHOX-201ENST00000334060 GTSF1LQ9H1H1 148 aa11.36□□□□□ -0.59
SHOX-201ENST00000334060 TRBV6-5A0A0K0K1A5 114 aa11.35□□□□□ -0.59
SHOX-201ENST00000334060 H7C1H1 209 aa11.35□□□□□ -0.59
SHOX-201ENST00000334060 SMAGPQ0VAQ4 97 aa11.35□□□□□ -0.59
SHOX-201ENST00000334060 LYPD5Q6UWN5 251 aa11.35□□□□□ -0.59
SHOX-201ENST00000334060 RAB37Q96AX2 223 aa11.35□□□□□ -0.59
SHOX-201ENST00000334060 TSHBP01222 138 aa11.34□□□□□ -0.59
SHOX-201ENST00000334060 MRPL23Q16540 153 aaKnown RBP11.34□□□□□ -0.59
SHOX-201ENST00000334060 LINC00588Q9Y4M8 146 aa11.34□□□□□ -0.59
SHOX-201ENST00000334060 A0A096LNJ9 63 aa11.34□□□□□ -0.59
SHOX-201ENST00000334060 SMIM2Q9BVW6 85 aa11.34□□□□□ -0.59
SHOX-201ENST00000334060 SACSQ9NZJ4 4579 aa11.33□□□□□ -0.59
SHOX-201ENST00000334060 H3BNG1 76 aa11.33□□□□□ -0.6
SHOX-201ENST00000334060 CEND1Q8N111 149 aa11.33□□□□□ -0.6
SHOX-201ENST00000334060 CHAC1Q9BUX1 264 aa11.33□□□□□ -0.6
SHOX-201ENST00000334060 GCSHP23434 173 aa11.32□□□□□ -0.6
SHOX-201ENST00000334060 NMUP48645 174 aa11.32□□□□□ -0.6
SHOX-201ENST00000334060 WFDC10BQ8IUB3 73 aa11.32□□□□□ -0.6
SHOX-201ENST00000334060 NXT2Q9NPJ8 142 aaKnown RBP11.32□□□□□ -0.6
SHOX-201ENST00000334060 SPANXA1Q9NS26 97 aa11.32□□□□□ -0.6
SHOX-201ENST00000334060 CYSLTR1Q9Y271 337 aa11.32□□□□□ -0.6
SHOX-201ENST00000334060 TRBV27A0A0K0K1C4 114 aa11.31□□□□□ -0.6
SHOX-201ENST00000334060 DNAJC30Q96LL9 226 aa11.31□□□□□ -0.6
SHOX-201ENST00000334060 KLK5Q9Y337 293 aaPredicted RBP11.31□□□□□ -0.6
SHOX-201ENST00000334060 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.3□□□□□ -0.6
SHOX-201ENST00000334060 IGKV2-29A2NJV5 120 aaPredicted RBP11.3□□□□□ -0.6
SHOX-201ENST00000334060 PRSS47A8MTI9 375 aa11.3□□□□□ -0.6
SHOX-201ENST00000334060 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.3□□□□□ -0.6
SHOX-201ENST00000334060 LYRM7Q5U5X0 104 aa11.3□□□□□ -0.6
SHOX-201ENST00000334060 CHCHD7Q9BUK0 85 aa11.3□□□□□ -0.6
SHOX-201ENST00000334060 C15orf53Q8NAA6 179 aa11.3□□□□□ -0.6
SHOX-201ENST00000334060 MAP1LC3AQ9H492 121 aa11.3□□□□□ -0.6
SHOX-201ENST00000334060 IGKCP01834 107 aa11.29□□□□□ -0.6
SHOX-201ENST00000334060 FCER1GP30273 86 aa11.29□□□□□ -0.6
SHOX-201ENST00000334060 C20orf78Q9BR46 151 aa11.29□□□□□ -0.6
SHOX-201ENST00000334060 DNAH10Q8IVF4 4471 aa11.29□□□□□ -0.6
SHOX-201ENST00000334060 A0A1B0GWB2 263 aa11.28□□□□□ -0.6
SHOX-201ENST00000334060 I3L3M4 83 aa11.28□□□□□ -0.6
SHOX-201ENST00000334060 DPM2O94777 84 aa11.28□□□□□ -0.6
SHOX-201ENST00000334060 RPL39P62891 51 aaKnown RBP11.28□□□□□ -0.6
SHOX-201ENST00000334060 TRBV6-8A0A0A6YYG3 113 aa11.28□□□□□ -0.6
SHOX-201ENST00000334060 DAZ4Q86SG3 579 aaKnown RBP11.28□□□□□ -0.6
SHOX-201ENST00000334060 PCP2Q8IVA1 136 aa11.28□□□□□ -0.6
SHOX-201ENST00000334060 DAZ3Q9NR90 486 aaKnown RBP11.28□□□□□ -0.6
SHOX-201ENST00000334060 ALMS1Q8TCU4 4167 aa11.28□□□□□ -0.6
SHOX-201ENST00000334060 FXYD2P54710 66 aa11.27□□□□□ -0.61
SHOX-201ENST00000334060 TCTAP57738 103 aa11.27□□□□□ -0.61
SHOX-201ENST00000334060 Q8N8P6 123 aa11.27□□□□□ -0.61
SHOX-201ENST00000334060 GEMIN7Q9H840 131 aaKnown RBP11.27□□□□□ -0.61
SHOX-201ENST00000334060 TRBV25-1A0A075B6N4 114 aa11.27□□□□□ -0.61
SHOX-201ENST00000334060 H3BMG7 143 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 92.9 ms