RNA–Protein interactions for RNA: ENST00000328596.10

TNFRSF18-201, Transcript of TNF receptor superfamily member 18, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TNFRSF18, Length 851 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF18-201ENST00000328596 H7C423 109 aa13.71□□□□□ -0.21
TNFRSF18-201ENST00000328596 ESDP10768 282 aa13.71□□□□□ -0.21
TNFRSF18-201ENST00000328596 KRTAP26-1Q6PEX3 210 aa13.71□□□□□ -0.21
TNFRSF18-201ENST00000328596 SMIM2Q9BVW6 85 aa13.71□□□□□ -0.21
TNFRSF18-201ENST00000328596 FAM30AQ9NZY2 134 aa13.71□□□□□ -0.21
TNFRSF18-201ENST00000328596 EPM2AB3EWF7 344 aa13.7□□□□□ -0.22
TNFRSF18-201ENST00000328596 USP17L23D6RBM5 183 aa13.7□□□□□ -0.22
TNFRSF18-201ENST00000328596 FCER1GP30273 86 aa13.7□□□□□ -0.22
TNFRSF18-201ENST00000328596 TRAV8-4A0A0B4J246 113 aa13.69□□□□□ -0.22
TNFRSF18-201ENST00000328596 PRSS47A8MTI9 375 aa13.69□□□□□ -0.22
TNFRSF18-201ENST00000328596 TCAPO15273 167 aa13.69□□□□□ -0.22
TNFRSF18-201ENST00000328596 MT-ND6P03923 174 aa13.69□□□□□ -0.22
TNFRSF18-201ENST00000328596 HAMPP81172 84 aa13.69□□□□□ -0.22
TNFRSF18-201ENST00000328596 DNAH8Q96JB1 4490 aa13.68□□□□□ -0.22
TNFRSF18-201ENST00000328596 IGLV10-54A0A075B6I4 117 aa13.68□□□□□ -0.22
TNFRSF18-201ENST00000328596 TGIF2-C20orf24A0A0A6YYL0 155 aa13.68□□□□□ -0.22
TNFRSF18-201ENST00000328596 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.67□□□□□ -0.22
TNFRSF18-201ENST00000328596 IGKV2-29A2NJV5 120 aaPredicted RBP13.67□□□□□ -0.22
TNFRSF18-201ENST00000328596 LINC01620Q4KN68 170 aa13.67□□□□□ -0.22
TNFRSF18-201ENST00000328596 AMMECR1LQ6DCA0 310 aa13.67□□□□□ -0.22
TNFRSF18-201ENST00000328596 Q6ZSA8 131 aa13.67□□□□□ -0.22
TNFRSF18-201ENST00000328596 FAT1Q14517 4588 aa13.66□□□□□ -0.22
TNFRSF18-201ENST00000328596 MAP1LC3AQ9H492 121 aa13.66□□□□□ -0.22
TNFRSF18-201ENST00000328596 SMR3BP02814 79 aaPredicted RBP13.65□□□□□ -0.22
TNFRSF18-201ENST00000328596 FGF6P10767 208 aa13.65□□□□□ -0.22
TNFRSF18-201ENST00000328596 ZNF25P17030 456 aaPredicted RBP13.65□□□□□ -0.22
TNFRSF18-201ENST00000328596 KIAA1644Q3SXP7 199 aa13.65□□□□□ -0.22
TNFRSF18-201ENST00000328596 PRSS1P07477 247 aa13.64□□□□□ -0.23
TNFRSF18-201ENST00000328596 Q5VSD8 79 aa13.64□□□□□ -0.23
TNFRSF18-201ENST00000328596 RNASEKQ6P5S7 137 aaKnown RBP13.64□□□□□ -0.23
TNFRSF18-201ENST00000328596 SMCO4Q9NRQ5 59 aa13.64□□□□□ -0.23
TNFRSF18-201ENST00000328596 FABP9Q0Z7S8 132 aa13.63□□□□□ -0.23
TNFRSF18-201ENST00000328596 MRPL52Q86TS9 123 aaKnown RBP13.63□□□□□ -0.23
TNFRSF18-201ENST00000328596 TMEM18Q96B42 140 aa13.63□□□□□ -0.23
TNFRSF18-201ENST00000328596 YPEL4Q96NS1 127 aa13.63□□□□□ -0.23
TNFRSF18-201ENST00000328596 MRPL18Q9H0U6 180 aaKnown RBP13.63□□□□□ -0.23
TNFRSF18-201ENST00000328596 LOC389332A0A1B0GUA5 103 aa13.62□□□□□ -0.23
TNFRSF18-201ENST00000328596 RAB5AP20339 215 aa13.62□□□□□ -0.23
TNFRSF18-201ENST00000328596 SMAGPQ0VAQ4 97 aa13.62□□□□□ -0.23
TNFRSF18-201ENST00000328596 Q8N8P6 123 aa13.62□□□□□ -0.23
TNFRSF18-201ENST00000328596 IGKV3OR2-268A0A0C4DH90 116 aa13.61□□□□□ -0.23
TNFRSF18-201ENST00000328596 DGAT2L7PQ6IED9 249 aa13.61□□□□□ -0.23
TNFRSF18-201ENST00000328596 TMEM101Q96IK0 257 aa13.61□□□□□ -0.23
TNFRSF18-201ENST00000328596 TRAPPC1Q9Y5R8 145 aa13.61□□□□□ -0.23
TNFRSF18-201ENST00000328596 CBLN2Q8IUK8 224 aa13.6□□□□□ -0.23
TNFRSF18-201ENST00000328596 ALKBH7Q9BT30 221 aaPredicted RBP13.6□□□□□ -0.23
TNFRSF18-201ENST00000328596 NXT2Q9NPJ8 142 aaKnown RBP13.6□□□□□ -0.23
TNFRSF18-201ENST00000328596 FAM229AH3BQW9 127 aa13.59□□□□□ -0.23
TNFRSF18-201ENST00000328596 OR5A1Q8NGJ0 315 aa13.59□□□□□ -0.23
TNFRSF18-201ENST00000328596 CSDC2Q9Y534 153 aaKnown RBP13.59□□□□□ -0.23
TNFRSF18-201ENST00000328596 K7EMI3 77 aa13.58□□□□□ -0.24
TNFRSF18-201ENST00000328596 TIMM21Q9BVV7 248 aa13.58□□□□□ -0.24
TNFRSF18-201ENST00000328596 UBE2D4Q9Y2X8 147 aa13.58□□□□□ -0.24
TNFRSF18-201ENST00000328596 GAGE12HA6NDE8 117 aa13.57□□□□□ -0.24
TNFRSF18-201ENST00000328596 hDV102S1A0JD36 115 aa13.56□□□□□ -0.24
TNFRSF18-201ENST00000328596 IFI27P40305 119 aaPredicted RBP13.56□□□□□ -0.24
TNFRSF18-201ENST00000328596 C9orf163Q8N9P6 203 aa13.56□□□□□ -0.24
TNFRSF18-201ENST00000328596 CHCHD10Q8WYQ3 142 aaPredicted RBP13.56□□□□□ -0.24
TNFRSF18-201ENST00000328596 CDC42SE2Q9NRR3 84 aa13.56□□□□□ -0.24
TNFRSF18-201ENST00000328596 RPL39P62891 51 aaKnown RBP13.55□□□□□ -0.24
TNFRSF18-201ENST00000328596 ORMDL2Q53FV1 153 aa13.55□□□□□ -0.24
TNFRSF18-201ENST00000328596 SCXQ7RTU7 201 aa13.55□□□□□ -0.24
TNFRSF18-201ENST00000328596 CHAC1Q9BUX1 264 aa13.55□□□□□ -0.24
TNFRSF18-201ENST00000328596 INAFM2P0DMQ5 153 aa13.54□□□□□ -0.24
TNFRSF18-201ENST00000328596 ZNF664Q8N3J9 261 aa13.54□□□□□ -0.24
TNFRSF18-201ENST00000328596 PRSS3P2Q8NHM4 247 aa13.54□□□□□ -0.24
TNFRSF18-201ENST00000328596 VPS13BQ7Z7G8 4022 aa13.54□□□□□ -0.24
TNFRSF18-201ENST00000328596 CNBPP62633 177 aaKnown RBP13.53□□□□□ -0.24
TNFRSF18-201ENST00000328596 CFAP161Q6P656 301 aa13.53□□□□□ -0.24
TNFRSF18-201ENST00000328596 SPANXA1Q9NS26 97 aa13.53□□□□□ -0.24
TNFRSF18-201ENST00000328596 AP5S1Q9NUS5 200 aa13.53□□□□□ -0.24
TNFRSF18-201ENST00000328596 LINC00959A0A1B0GUT2 108 aa13.51□□□□□ -0.25
TNFRSF18-201ENST00000328596 C15orf56Q8N910 161 aa13.51□□□□□ -0.25
TNFRSF18-201ENST00000328596 CIRBP-AS1Q8TBR5 109 aa13.51□□□□□ -0.25
TNFRSF18-201ENST00000328596 G0S2P27469 103 aa13.5□□□□□ -0.25
TNFRSF18-201ENST00000328596 LINC00528Q8N1L1 170 aa13.5□□□□□ -0.25
TNFRSF18-201ENST00000328596 CYSLTR1Q9Y271 337 aa13.5□□□□□ -0.25
TNFRSF18-201ENST00000328596 PYGO1Q9Y3Y4 419 aa13.5□□□□□ -0.25
TNFRSF18-201ENST00000328596 LINC01546A6NGU7 62 aa13.49□□□□□ -0.25
TNFRSF18-201ENST00000328596 SLPIP03973 132 aa13.49□□□□□ -0.25
TNFRSF18-201ENST00000328596 XCL1P47992 114 aa13.49□□□□□ -0.25
TNFRSF18-201ENST00000328596 MRPS36P82909 103 aaKnown RBP13.49□□□□□ -0.25
TNFRSF18-201ENST00000328596 FOXI1Q12951 378 aa13.49□□□□□ -0.25
TNFRSF18-201ENST00000328596 C2orf66Q6UXQ4 117 aa13.49□□□□□ -0.25
TNFRSF18-201ENST00000328596 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.48□□□□□ -0.25
TNFRSF18-201ENST00000328596 CCL25O15444 150 aa13.48□□□□□ -0.25
TNFRSF18-201ENST00000328596 SS18Q15532 418 aa13.48□□□□□ -0.25
TNFRSF18-201ENST00000328596 SDIM1Q6ZPB5 146 aa13.48□□□□□ -0.25
TNFRSF18-201ENST00000328596 Q6ZUT4 128 aa13.48□□□□□ -0.25
TNFRSF18-201ENST00000328596 C18orf32Q8TCD1 76 aa13.48□□□□□ -0.25
TNFRSF18-201ENST00000328596 SRRM2Q9UQ35 2752 aaKnown RBP13.48□□□□□ -0.25
TNFRSF18-201ENST00000328596 COLCA2A8K830 154 aa13.47□□□□□ -0.25
TNFRSF18-201ENST00000328596 PLA2G1BP04054 148 aaKnown RBP13.47□□□□□ -0.25
TNFRSF18-201ENST00000328596 FA2HQ7L5A8 372 aa13.47□□□□□ -0.25
TNFRSF18-201ENST00000328596 FAM104AQ969W3 186 aa13.47□□□□□ -0.25
TNFRSF18-201ENST00000328596 HIGD2BQ4VC39 106 aa13.46□□□□□ -0.25
TNFRSF18-201ENST00000328596 RNASE13Q5GAN3 156 aaKnown RBP13.46□□□□□ -0.25
TNFRSF18-201ENST00000328596 IGHV3-64A0A075B6Q5 118 aa13.45□□□□□ -0.26
TNFRSF18-201ENST00000328596 OPRPNQ99935 248 aaPredicted RBP13.45□□□□□ -0.26
TNFRSF18-201ENST00000328596 GVQW2A0A096LPI5 108 aaPredicted RBP13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 115.2 ms