RNA–Protein interactions for RNA: ENST00000326956.11

SSBP3-201, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 2

Gene SSBP3, Length 2,913 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-201ENST00000326956 COX7A2LO14548 114 aa10.57□□□□□ -0.72
SSBP3-201ENST00000326956 COX6A2Q02221 97 aa10.57□□□□□ -0.72
SSBP3-201ENST00000326956 DEFB121Q5J5C9 76 aa10.57□□□□□ -0.72
SSBP3-201ENST00000326956 IGHV3OR16-12A0A075B7B8 117 aa10.56□□□□□ -0.72
SSBP3-201ENST00000326956 IGLV5-45A0A087WSX0 123 aa10.56□□□□□ -0.72
SSBP3-201ENST00000326956 DSCR9P59020 149 aa10.56□□□□□ -0.72
SSBP3-201ENST00000326956 ACYP1P07311 99 aa10.55□□□□□ -0.72
SSBP3-201ENST00000326956 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.55□□□□□ -0.72
SSBP3-201ENST00000326956 USP9YO00507 2555 aaPredicted RBP10.55□□□□□ -0.72
SSBP3-201ENST00000326956 RS1O15537 224 aa10.55□□□□□ -0.72
SSBP3-201ENST00000326956 NOTCH3Q9UM47 2321 aa10.55□□□□□ -0.72
SSBP3-201ENST00000326956 LINC00242Q5T6M2 205 aa10.54□□□□□ -0.72
SSBP3-201ENST00000326956 C11orf72Q8NBR9 251 aa10.54□□□□□ -0.72
SSBP3-201ENST00000326956 ZNF702PQ9H963 129 aa10.54□□□□□ -0.72
SSBP3-201ENST00000326956 MAP6D1Q9H9H5 199 aa10.54□□□□□ -0.72
SSBP3-201ENST00000326956 TRGV1A0A0A0MS02 117 aa10.54□□□□□ -0.72
SSBP3-201ENST00000326956 A8MTW9 85 aa10.54□□□□□ -0.72
SSBP3-201ENST00000326956 RPL36AP83881 106 aaKnown RBP10.54□□□□□ -0.72
SSBP3-201ENST00000326956 BEAN1Q3B7T3 259 aa10.54□□□□□ -0.72
SSBP3-201ENST00000326956 C18orf65Q6ZTR6 163 aa10.54□□□□□ -0.72
SSBP3-201ENST00000326956 MAPK1IP1LQ8NDC0 245 aa10.54□□□□□ -0.72
SSBP3-201ENST00000326956 RPL36ALQ969Q0 106 aaKnown RBP10.54□□□□□ -0.72
SSBP3-201ENST00000326956 XCL2Q9UBD3 114 aa10.54□□□□□ -0.72
SSBP3-201ENST00000326956 IGLV5-39A0A0G2JS06 123 aa10.53□□□□□ -0.72
SSBP3-201ENST00000326956 FAM110AQ9BQ89 295 aa10.53□□□□□ -0.72
SSBP3-201ENST00000326956 CHCHD5Q9BSY4 110 aa10.53□□□□□ -0.72
SSBP3-201ENST00000326956 J3QLI3 93 aa10.53□□□□□ -0.72
SSBP3-201ENST00000326956 NRGNQ92686 78 aa10.53□□□□□ -0.72
SSBP3-201ENST00000326956 PRORYQ9H606 182 aa10.52□□□□□ -0.73
SSBP3-201ENST00000326956 TRBV7-7A0A0K0K1E9 115 aa10.51□□□□□ -0.73
SSBP3-201ENST00000326956 SMIM1B2RUZ4 78 aa10.51□□□□□ -0.73
SSBP3-201ENST00000326956 BAALC-AS2P0C853 105 aa10.51□□□□□ -0.73
SSBP3-201ENST00000326956 C2CD3Q4AC94 2353 aa10.51□□□□□ -0.73
SSBP3-201ENST00000326956 NDUFA7O95182 113 aa10.51□□□□□ -0.73
SSBP3-201ENST00000326956 LINC00694P0DN24 101 aa10.51□□□□□ -0.73
SSBP3-201ENST00000326956 HERV-K104P63124 156 aa10.5□□□□□ -0.73
SSBP3-201ENST00000326956 DAZ2Q13117 558 aaKnown RBP10.5□□□□□ -0.73
SSBP3-201ENST00000326956 DAZ4Q86SG3 579 aaKnown RBP10.5□□□□□ -0.73
SSBP3-201ENST00000326956 DAZ3Q9NR90 486 aaKnown RBP10.5□□□□□ -0.73
SSBP3-201ENST00000326956 FAM236AA0A1B0GUQ0 79 aa10.5□□□□□ -0.73
SSBP3-201ENST00000326956 FAM236BA0A1B0GV22 79 aa10.5□□□□□ -0.73
SSBP3-201ENST00000326956 UBE2L6O14933 153 aa10.5□□□□□ -0.73
SSBP3-201ENST00000326956 TRACP01848 142 aa10.5□□□□□ -0.73
SSBP3-201ENST00000326956 STHQ8IWL8 128 aa10.5□□□□□ -0.73
SSBP3-201ENST00000326956 Q8N2B8 174 aa10.5□□□□□ -0.73
SSBP3-201ENST00000326956 SOSTDC1Q6X4U4 206 aa10.49□□□□□ -0.73
SSBP3-201ENST00000326956 SMIM20Q8N5G0 67 aa10.49□□□□□ -0.73
SSBP3-201ENST00000326956 Q6YL49 198 aa10.49□□□□□ -0.73
SSBP3-201ENST00000326956 IMUPQ9GZP8 106 aa10.48□□□□□ -0.73
SSBP3-201ENST00000326956 MYO9AB2RTY4 2548 aa10.48□□□□□ -0.73
SSBP3-201ENST00000326956 LINC00643Q86TS7 51 aa10.48□□□□□ -0.73
SSBP3-201ENST00000326956 K7EQD1 137 aa10.47□□□□□ -0.73
SSBP3-201ENST00000326956 USP9XQ93008 2570 aaPredicted RBP10.47□□□□□ -0.73
SSBP3-201ENST00000326956 CRPP02741 224 aa10.47□□□□□ -0.73
SSBP3-201ENST00000326956 TRBV10-1A0A0K0K1A3 114 aa10.47□□□□□ -0.73
SSBP3-201ENST00000326956 DEFB114Q30KQ6 69 aa10.47□□□□□ -0.73
SSBP3-201ENST00000326956 CSDC2Q9Y534 153 aaKnown RBP10.47□□□□□ -0.73
SSBP3-201ENST00000326956 INAFM2P0DMQ5 153 aa10.46□□□□□ -0.73
SSBP3-201ENST00000326956 TRAV13-2A0A0B4J235 113 aa10.46□□□□□ -0.74
SSBP3-201ENST00000326956 TOMM7Q9P0U1 55 aa10.46□□□□□ -0.74
SSBP3-201ENST00000326956 ITPR1Q14643 2758 aa10.45□□□□□ -0.74
SSBP3-201ENST00000326956 WNK1Q9H4A3 2382 aa10.45□□□□□ -0.74
SSBP3-201ENST00000326956 VPS13CQ709C8 3753 aa10.45□□□□□ -0.74
SSBP3-201ENST00000326956 HIST2H2BCQ6DN03 193 aa10.45□□□□□ -0.74
SSBP3-201ENST00000326956 HIST2H2BDQ6DRA6 164 aa10.45□□□□□ -0.74
SSBP3-201ENST00000326956 C4orf3Q8WVX3 66 aa10.45□□□□□ -0.74
SSBP3-201ENST00000326956 CDC42SE2Q9NRR3 84 aa10.45□□□□□ -0.74
SSBP3-201ENST00000326956 DNAL4O96015 105 aa10.45□□□□□ -0.74
SSBP3-201ENST00000326956 DOPEY1Q5JWR5 2465 aa10.45□□□□□ -0.74
SSBP3-201ENST00000326956 GAGE2AQ6NT46 116 aa10.45□□□□□ -0.74
SSBP3-201ENST00000326956 FAM19A3Q7Z5A8 133 aa10.44□□□□□ -0.74
SSBP3-201ENST00000326956 C3orf56Q8N813 242 aa10.44□□□□□ -0.74
SSBP3-201ENST00000326956 TMEM243Q9BU79 118 aa10.44□□□□□ -0.74
SSBP3-201ENST00000326956 IGKV3OR2-268A0A0C4DH90 116 aa10.44□□□□□ -0.74
SSBP3-201ENST00000326956 NTM-AS1Q6ZSK4 140 aa10.44□□□□□ -0.74
SSBP3-201ENST00000326956 Q6ZTI0 123 aa10.44□□□□□ -0.74
SSBP3-201ENST00000326956 ACACBO00763 2458 aa10.44□□□□□ -0.74
SSBP3-201ENST00000326956 PF4P02776 101 aa10.44□□□□□ -0.74
SSBP3-201ENST00000326956 Q9HAA7 133 aa10.43□□□□□ -0.74
SSBP3-201ENST00000326956 CRYBG3Q68DQ2 2970 aa10.43□□□□□ -0.74
SSBP3-201ENST00000326956 C1orf158Q8N1D5 194 aa10.43□□□□□ -0.74
SSBP3-201ENST00000326956 ANKRD17O75179 2603 aaKnown RBP10.43□□□□□ -0.74
SSBP3-201ENST00000326956 F5H768 121 aa10.42□□□□□ -0.74
SSBP3-201ENST00000326956 FAM218AQ96MZ4 157 aa10.42□□□□□ -0.74
SSBP3-201ENST00000326956 TMEM126AQ9H061 195 aa10.42□□□□□ -0.74
SSBP3-201ENST00000326956 LINC00158P58513 81 aa10.42□□□□□ -0.74
SSBP3-201ENST00000326956 MIR7-3HGQ8N6C7 128 aa10.42□□□□□ -0.74
SSBP3-201ENST00000326956 SMCR5Q8TEV8 140 aa10.42□□□□□ -0.74
SSBP3-201ENST00000326956 MALP21145 153 aa10.41□□□□□ -0.74
SSBP3-201ENST00000326956 ODF3L2Q3SX64 289 aa10.41□□□□□ -0.74
SSBP3-201ENST00000326956 FAM222AQ5U5X8 452 aa10.41□□□□□ -0.74
SSBP3-201ENST00000326956 OVOL2Q9BRP0 275 aa10.41□□□□□ -0.74
SSBP3-201ENST00000326956 SND1-IT1Q9HBX3 110 aa10.41□□□□□ -0.74
SSBP3-201ENST00000326956 C9orf153Q5TBE3 101 aa10.41□□□□□ -0.74
SSBP3-201ENST00000326956 COX7B2Q8TF08 81 aa10.41□□□□□ -0.74
SSBP3-201ENST00000326956 POLQO75417 2590 aa10.41□□□□□ -0.74
SSBP3-201ENST00000326956 NOP10Q9NPE3 64 aaKnown RBP10.4□□□□□ -0.74
SSBP3-201ENST00000326956 TRGV2A0A075B6R0 118 aa10.4□□□□□ -0.74
SSBP3-201ENST00000326956 FAM208BQ5VWN6 2430 aa10.4□□□□□ -0.74
SSBP3-201ENST00000326956 RPL28P46779 137 aaKnown RBP10.4□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 92.8 ms