RNA–Protein interactions for RNA: ENST00000323144.11

TPM3-204, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,088 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-204ENST00000323144 A0A1B0GUT8 65 aa7.75□□□□□ -1.17
TPM3-204ENST00000323144 ODF1Q14990 250 aa7.75□□□□□ -1.17
TPM3-204ENST00000323144 TEX261Q6UWH6 196 aa7.75□□□□□ -1.17
TPM3-204ENST00000323144 STPG4Q8N801 248 aa7.75□□□□□ -1.17
TPM3-204ENST00000323144 TSKUQ8WUA8 353 aa7.75□□□□□ -1.17
TPM3-204ENST00000323144 BORCS7Q96B45 105 aa7.75□□□□□ -1.17
TPM3-204ENST00000323144 DPH3Q96FX2 82 aa7.75□□□□□ -1.17
TPM3-204ENST00000323144 ST20Q9HBF5 79 aa7.75□□□□□ -1.17
TPM3-204ENST00000323144 TNXBP22105 4242 aa7.75□□□□□ -1.17
TPM3-204ENST00000323144 UBR4Q5T4S7 5183 aa7.74□□□□□ -1.17
TPM3-204ENST00000323144 RNASE13Q5GAN3 156 aaKnown RBP7.74□□□□□ -1.17
TPM3-204ENST00000323144 C7orf33Q8WU49 177 aa7.74□□□□□ -1.17
TPM3-204ENST00000323144 BTF3L4Q96K17 158 aa7.74□□□□□ -1.17
TPM3-204ENST00000323144 CARD19Q96LW7 228 aa7.74□□□□□ -1.17
TPM3-204ENST00000323144 FAM210AQ96ND0 272 aa7.74□□□□□ -1.17
TPM3-204ENST00000323144 EIF5A2Q9GZV4 153 aaKnown RBP7.74□□□□□ -1.17
TPM3-204ENST00000323144 TMEM191AQ9H0A3 160 aa7.74□□□□□ -1.17
TPM3-204ENST00000323144 V9GYV3 84 aa7.74□□□□□ -1.17
TPM3-204ENST00000323144 C7orf77A4D0Y5 90 aa7.73□□□□□ -1.17
TPM3-204ENST00000323144 ZNF727A8MUV8 499 aa7.73□□□□□ -1.17
TPM3-204ENST00000323144 SRP19P09132 144 aaKnown RBP7.73□□□□□ -1.17
TPM3-204ENST00000323144 RAB4AP20338 218 aa7.73□□□□□ -1.17
TPM3-204ENST00000323144 POLR2KP53803 58 aaKnown RBP7.73□□□□□ -1.17
TPM3-204ENST00000323144 Q6ZUT4 128 aa7.73□□□□□ -1.17
TPM3-204ENST00000323144 MRPL52Q86TS9 123 aaKnown RBP7.73□□□□□ -1.17
TPM3-204ENST00000323144 TMEM101Q96IK0 257 aa7.73□□□□□ -1.17
TPM3-204ENST00000323144 IGHV1-58A0A0C4DH39 117 aa7.72□□□□□ -1.17
TPM3-204ENST00000323144 TRBV27A0A0K0K1C4 114 aa7.72□□□□□ -1.17
TPM3-204ENST00000323144 NRACQ8N912 160 aa7.72□□□□□ -1.17
TPM3-204ENST00000323144 OSTCQ9NRP0 149 aa7.72□□□□□ -1.17
TPM3-204ENST00000323144 CDC42SE2Q9NRR3 84 aa7.72□□□□□ -1.17
TPM3-204ENST00000323144 NUP35Q8NFH5 326 aa7.71□□□□□ -1.18
TPM3-204ENST00000323144 ISOC2Q96AB3 205 aa7.71□□□□□ -1.18
TPM3-204ENST00000323144 CAMPP49913 170 aa7.7□□□□□ -1.18
TPM3-204ENST00000323144 ZNF664Q8N3J9 261 aa7.7□□□□□ -1.18
TPM3-204ENST00000323144 UBE2D4Q9Y2X8 147 aa7.7□□□□□ -1.18
TPM3-204ENST00000323144 C9JQL5 133 aa7.69□□□□□ -1.18
TPM3-204ENST00000323144 FCER1GP30273 86 aa7.69□□□□□ -1.18
TPM3-204ENST00000323144 SUMO2P61956 95 aaKnown RBP7.69□□□□□ -1.18
TPM3-204ENST00000323144 RPL23P62829 140 aaKnown RBP7.69□□□□□ -1.18
TPM3-204ENST00000323144 SYCNQ0VAF6 134 aa7.69□□□□□ -1.18
TPM3-204ENST00000323144 SS18Q15532 418 aa7.69□□□□□ -1.18
TPM3-204ENST00000323144 CD164L2Q6UWJ8 174 aa7.69□□□□□ -1.18
TPM3-204ENST00000323144 IGLV4-69A0A075B6H9 119 aa7.68□□□□□ -1.18
TPM3-204ENST00000323144 A0A1B0GVG6 124 aa7.68□□□□□ -1.18
TPM3-204ENST00000323144 RIGQ13278 110 aa7.68□□□□□ -1.18
TPM3-204ENST00000323144 ADIRFQ15847 76 aa7.68□□□□□ -1.18
TPM3-204ENST00000323144 MRPL51Q4U2R6 128 aaKnown RBP7.68□□□□□ -1.18
TPM3-204ENST00000323144 TRAV13-1A0A0B4J241 112 aa7.67□□□□□ -1.18
TPM3-204ENST00000323144 ZNF561-AS1K7EIQ3 104 aa7.67□□□□□ -1.18
TPM3-204ENST00000323144 PTTG1IPP53801 180 aa7.67□□□□□ -1.18
TPM3-204ENST00000323144 SRSF3P84103 164 aaKnown RBP7.67□□□□□ -1.18
TPM3-204ENST00000323144 COX7A2LO14548 114 aa7.66□□□□□ -1.18
TPM3-204ENST00000323144 RPL39P62891 51 aaKnown RBP7.66□□□□□ -1.18
TPM3-204ENST00000323144 NAT8BQ9UHF3 227 aa7.66□□□□□ -1.18
TPM3-204ENST00000323144 LRP2P98164 4655 aa7.66□□□□□ -1.18
TPM3-204ENST00000323144 VCYO14598 125 aa7.65□□□□□ -1.18
TPM3-204ENST00000323144 MALP21145 153 aa7.65□□□□□ -1.18
TPM3-204ENST00000323144 SPAG11BQ08648 103 aa7.65□□□□□ -1.18
TPM3-204ENST00000323144 GAGE2BQ13066 116 aa7.65□□□□□ -1.18
TPM3-204ENST00000323144 FAM74A3Q4VXF1 159 aa7.65□□□□□ -1.18
TPM3-204ENST00000323144 FAM104BQ5XKR9 115 aa7.65□□□□□ -1.18
TPM3-204ENST00000323144 C5orf38Q86SI9 138 aa7.65□□□□□ -1.18
TPM3-204ENST00000323144 FAM104AQ969W3 186 aa7.65□□□□□ -1.18
TPM3-204ENST00000323144 LINC01600Q96MT4 127 aa7.65□□□□□ -1.18
TPM3-204ENST00000323144 LINC00474Q9P2X8 69 aa7.65□□□□□ -1.18
TPM3-204ENST00000323144 A0A0J9YXV3 536 aa7.64□□□□□ -1.19
TPM3-204ENST00000323144 LOC107984640A0A0U1RRK4 108 aa7.64□□□□□ -1.19
TPM3-204ENST00000323144 SMIM27A0A1W2PRY6 76 aa7.64□□□□□ -1.19
TPM3-204ENST00000323144 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.64□□□□□ -1.19
TPM3-204ENST00000323144 RPL18AQ02543 176 aaKnown RBP7.64□□□□□ -1.19
TPM3-204ENST00000323144 TMEM241Q24JQ0 296 aa7.64□□□□□ -1.19
TPM3-204ENST00000323144 MRPL54Q6P161 138 aaKnown RBP7.64□□□□□ -1.19
TPM3-204ENST00000323144 CAMK2N2Q96S95 79 aa7.64□□□□□ -1.19
TPM3-204ENST00000323144 KIR2DL4Q99706 377 aa7.64□□□□□ -1.19
TPM3-204ENST00000323144 SMIM2Q9BVW6 85 aa7.64□□□□□ -1.19
TPM3-204ENST00000323144 NAT8Q9UHE5 227 aa7.64□□□□□ -1.19
TPM3-204ENST00000323144 PKIGQ9Y2B9 76 aa7.64□□□□□ -1.19
TPM3-204ENST00000323144 CSDC2Q9Y534 153 aaKnown RBP7.64□□□□□ -1.19
TPM3-204ENST00000323144 A0A1W2PNN7 141 aa7.63□□□□□ -1.19
TPM3-204ENST00000323144 C1orf196B1AJZ1 125 aa7.63□□□□□ -1.19
TPM3-204ENST00000323144 PPP1R2P9O14990 202 aa7.63□□□□□ -1.19
TPM3-204ENST00000323144 APOMO95445 188 aa7.63□□□□□ -1.19
TPM3-204ENST00000323144 NPYP01303 97 aa7.63□□□□□ -1.19
TPM3-204ENST00000323144 A0A1B0GXF2 115 aa7.62□□□□□ -1.19
TPM3-204ENST00000323144 D6R8Y8 96 aa7.62□□□□□ -1.19
TPM3-204ENST00000323144 TNFRSF6BO95407 300 aa7.62□□□□□ -1.19
TPM3-204ENST00000323144 OPRPNQ99935 248 aaPredicted RBP7.62□□□□□ -1.19
TPM3-204ENST00000323144 TIMM21Q9BVV7 248 aa7.62□□□□□ -1.19
TPM3-204ENST00000323144 PPP1R17O96001 155 aa7.61□□□□□ -1.19
TPM3-204ENST00000323144 CKS2P33552 79 aa7.61□□□□□ -1.19
TPM3-204ENST00000323144 SPINK6Q6UWN8 80 aa7.61□□□□□ -1.19
TPM3-204ENST00000323144 Q6ZRP5 223 aa7.61□□□□□ -1.19
TPM3-204ENST00000323144 ORAOV1Q8WV07 137 aa7.61□□□□□ -1.19
TPM3-204ENST00000323144 TRBV24-1A0A075B6N3 115 aa7.6□□□□□ -1.19
TPM3-204ENST00000323144 TCAPO15273 167 aa7.6□□□□□ -1.19
TPM3-204ENST00000323144 RPL32P62910 135 aaKnown RBP7.6□□□□□ -1.19
TPM3-204ENST00000323144 HBBP68871 147 aa7.6□□□□□ -1.19
TPM3-204ENST00000323144 C9orf116Q5BN46 136 aaPredicted RBP7.6□□□□□ -1.19
TPM3-204ENST00000323144 PHF5AQ7RTV0 110 aaKnown RBP7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms