RNA–Protein interactions for RNA: ENST00000321253.6

TUBA3D-201, Transcript of tubulin alpha 3d, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBA3D, Length 1,546 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA3D-201ENST00000321253 PHOX2AO14813 284 aa9.56□□□□□ -0.88
TUBA3D-201ENST00000321253 PRSS1P07477 247 aa9.56□□□□□ -0.88
TUBA3D-201ENST00000321253 HAMPP81172 84 aa9.56□□□□□ -0.88
TUBA3D-201ENST00000321253 TMEM136Q6ZRR5 245 aa9.56□□□□□ -0.88
TUBA3D-201ENST00000321253 TMEM18Q96B42 140 aa9.56□□□□□ -0.88
TUBA3D-201ENST00000321253 SMIM2Q9BVW6 85 aa9.56□□□□□ -0.88
TUBA3D-201ENST00000321253 SEC11CQ9BY50 192 aa9.56□□□□□ -0.88
TUBA3D-201ENST00000321253 NPYP01303 97 aa9.56□□□□□ -0.88
TUBA3D-201ENST00000321253 CHCHD10Q8WYQ3 142 aaPredicted RBP9.56□□□□□ -0.88
TUBA3D-201ENST00000321253 IMMP2LQ96T52 175 aa9.56□□□□□ -0.88
TUBA3D-201ENST00000321253 KRTAP4-5Q9BYR2 181 aa9.56□□□□□ -0.88
TUBA3D-201ENST00000321253 CTDSP1Q9GZU7 261 aa9.56□□□□□ -0.88
TUBA3D-201ENST00000321253 FAM30AQ9NZY2 134 aa9.56□□□□□ -0.88
TUBA3D-201ENST00000321253 hDV102S1A0JD36 115 aa9.55□□□□□ -0.88
TUBA3D-201ENST00000321253 SLC7A5P1Q8MH63 180 aa9.55□□□□□ -0.88
TUBA3D-201ENST00000321253 ZNF664Q8N3J9 261 aa9.55□□□□□ -0.88
TUBA3D-201ENST00000321253 PRELID3AQ96N28 172 aa9.55□□□□□ -0.88
TUBA3D-201ENST00000321253 CDC42SE2Q9NRR3 84 aa9.55□□□□□ -0.88
TUBA3D-201ENST00000321253 EPM2AB3EWF7 344 aa9.54□□□□□ -0.88
TUBA3D-201ENST00000321253 ATP6V1G1O75348 118 aa9.54□□□□□ -0.88
TUBA3D-201ENST00000321253 CFAP161Q6P656 301 aa9.54□□□□□ -0.88
TUBA3D-201ENST00000321253 AP5S1Q9NUS5 200 aa9.54□□□□□ -0.88
TUBA3D-201ENST00000321253 SS18Q15532 418 aa9.53□□□□□ -0.88
TUBA3D-201ENST00000321253 Q6ZSA8 131 aa9.53□□□□□ -0.88
TUBA3D-201ENST00000321253 LAMTOR2Q9Y2Q5 125 aa9.53□□□□□ -0.88
TUBA3D-201ENST00000321253 UBE2D4Q9Y2X8 147 aa9.53□□□□□ -0.88
TUBA3D-201ENST00000321253 CSDC2Q9Y534 153 aaKnown RBP9.53□□□□□ -0.88
TUBA3D-201ENST00000321253 LINC00959A0A1B0GUT2 108 aa9.52□□□□□ -0.88
TUBA3D-201ENST00000321253 SMR3BP02814 79 aaPredicted RBP9.52□□□□□ -0.88
TUBA3D-201ENST00000321253 RAB5AP20339 215 aa9.52□□□□□ -0.88
TUBA3D-201ENST00000321253 XCL1P47992 114 aa9.52□□□□□ -0.88
TUBA3D-201ENST00000321253 CCL25O15444 150 aa9.51□□□□□ -0.89
TUBA3D-201ENST00000321253 S100PP25815 95 aa9.51□□□□□ -0.89
TUBA3D-201ENST00000321253 TIMM21Q9BVV7 248 aa9.51□□□□□ -0.89
TUBA3D-201ENST00000321253 ABCA13Q86UQ4 5058 aa9.51□□□□□ -0.89
TUBA3D-201ENST00000321253 TRAV9-1A0A075B6T8 112 aa9.51□□□□□ -0.89
TUBA3D-201ENST00000321253 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.51□□□□□ -0.89
TUBA3D-201ENST00000321253 MAP1LC3AQ9H492 121 aa9.51□□□□□ -0.89
TUBA3D-201ENST00000321253 CNBPP62633 177 aaKnown RBP9.5□□□□□ -0.89
TUBA3D-201ENST00000321253 FOXI1Q12951 378 aa9.5□□□□□ -0.89
TUBA3D-201ENST00000321253 Q5VSD8 79 aa9.5□□□□□ -0.89
TUBA3D-201ENST00000321253 C15orf56Q8N910 161 aa9.5□□□□□ -0.89
TUBA3D-201ENST00000321253 C9orf163Q8N9P6 203 aa9.5□□□□□ -0.89
TUBA3D-201ENST00000321253 LOC389332A0A1B0GUA5 103 aa9.49□□□□□ -0.89
TUBA3D-201ENST00000321253 FAM229AH3BQW9 127 aa9.49□□□□□ -0.89
TUBA3D-201ENST00000321253 RPL39P62891 51 aaKnown RBP9.49□□□□□ -0.89
TUBA3D-201ENST00000321253 RNASE13Q5GAN3 156 aaKnown RBP9.49□□□□□ -0.89
TUBA3D-201ENST00000321253 Q6ZUT4 128 aa9.49□□□□□ -0.89
TUBA3D-201ENST00000321253 SPANXA1Q9NS26 97 aa9.49□□□□□ -0.89
TUBA3D-201ENST00000321253 C1orf196B1AJZ1 125 aa9.48□□□□□ -0.89
TUBA3D-201ENST00000321253 HIGD2BQ4VC39 106 aa9.48□□□□□ -0.89
TUBA3D-201ENST00000321253 C10orf91Q5T1B1 145 aa9.48□□□□□ -0.89
TUBA3D-201ENST00000321253 CD164L2Q6UWJ8 174 aa9.48□□□□□ -0.89
TUBA3D-201ENST00000321253 SCXQ7RTU7 201 aa9.48□□□□□ -0.89
TUBA3D-201ENST00000321253 CHAC1Q9BUX1 264 aa9.48□□□□□ -0.89
TUBA3D-201ENST00000321253 CARHSP1Q9Y2V2 147 aaKnown RBP9.48□□□□□ -0.89
TUBA3D-201ENST00000321253 DNAH8Q96JB1 4490 aa9.48□□□□□ -0.89
TUBA3D-201ENST00000321253 TRAV13-1A0A0B4J241 112 aa9.47□□□□□ -0.89
TUBA3D-201ENST00000321253 PRSS47A8MTI9 375 aa9.47□□□□□ -0.89
TUBA3D-201ENST00000321253 RHEBQ15382 184 aa9.47□□□□□ -0.89
TUBA3D-201ENST00000321253 IGHV3-64A0A075B6Q5 118 aa9.46□□□□□ -0.89
TUBA3D-201ENST00000321253 IGHV1-58A0A0C4DH39 117 aa9.46□□□□□ -0.89
TUBA3D-201ENST00000321253 Q8N8P6 123 aa9.46□□□□□ -0.89
TUBA3D-201ENST00000321253 RPS10P5Q9NQ39 176 aa9.46□□□□□ -0.89
TUBA3D-201ENST00000321253 GVQW2A0A096LPI5 108 aaPredicted RBP9.46□□□□□ -0.9
TUBA3D-201ENST00000321253 IFI27P40305 119 aaPredicted RBP9.46□□□□□ -0.9
TUBA3D-201ENST00000321253 FAT1Q14517 4588 aa9.45□□□□□ -0.9
TUBA3D-201ENST00000321253 SLPIP03973 132 aa9.45□□□□□ -0.9
TUBA3D-201ENST00000321253 MALP21145 153 aa9.45□□□□□ -0.9
TUBA3D-201ENST00000321253 MRPS36P82909 103 aaKnown RBP9.45□□□□□ -0.9
TUBA3D-201ENST00000321253 COX7A2LO14548 114 aa9.44□□□□□ -0.9
TUBA3D-201ENST00000321253 S100A1P23297 94 aa9.44□□□□□ -0.9
TUBA3D-201ENST00000321253 KIAA1644Q3SXP7 199 aa9.44□□□□□ -0.9
TUBA3D-201ENST00000321253 COX19Q49B96 90 aa9.44□□□□□ -0.9
TUBA3D-201ENST00000321253 ORMDL2Q53FV1 153 aa9.44□□□□□ -0.9
TUBA3D-201ENST00000321253 SDIM1Q6ZPB5 146 aa9.44□□□□□ -0.9
TUBA3D-201ENST00000321253 CIRBP-AS1Q8TBR5 109 aa9.44□□□□□ -0.9
TUBA3D-201ENST00000321253 NXT2Q9NPJ8 142 aaKnown RBP9.44□□□□□ -0.9
TUBA3D-201ENST00000321253 K7EMI3 77 aa9.43□□□□□ -0.9
TUBA3D-201ENST00000321253 LINC00528Q8N1L1 170 aa9.43□□□□□ -0.9
TUBA3D-201ENST00000321253 OPRPNQ99935 248 aaPredicted RBP9.43□□□□□ -0.9
TUBA3D-201ENST00000321253 GNB1LQ9BYB4 327 aa9.43□□□□□ -0.9
TUBA3D-201ENST00000321253 IFITM10A6NMD0 228 aa9.42□□□□□ -0.9
TUBA3D-201ENST00000321253 ZNF561-AS1K7EIQ3 104 aa9.42□□□□□ -0.9
TUBA3D-201ENST00000321253 APOC3P02656 99 aa9.42□□□□□ -0.9
TUBA3D-201ENST00000321253 CYSLTR1Q9Y271 337 aa9.42□□□□□ -0.9
TUBA3D-201ENST00000321253 PYGO1Q9Y3Y4 419 aa9.42□□□□□ -0.9
TUBA3D-201ENST00000321253 PLA2G1BP04054 148 aaKnown RBP9.41□□□□□ -0.9
TUBA3D-201ENST00000321253 INAFM2P0DMQ5 153 aa9.41□□□□□ -0.9
TUBA3D-201ENST00000321253 C2orf66Q6UXQ4 117 aa9.41□□□□□ -0.9
TUBA3D-201ENST00000321253 MT-ND6P03923 174 aa9.41□□□□□ -0.9
TUBA3D-201ENST00000321253 C5orf38Q86SI9 138 aa9.41□□□□□ -0.9
TUBA3D-201ENST00000321253 SVBPQ8N300 66 aa9.41□□□□□ -0.9
TUBA3D-201ENST00000321253 FAM104AQ969W3 186 aa9.41□□□□□ -0.9
TUBA3D-201ENST00000321253 TMEM141Q96I45 108 aa9.41□□□□□ -0.9
TUBA3D-201ENST00000321253 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.41□□□□□ -0.9
TUBA3D-201ENST00000321253 IGLV4-3A0A075B6K6 122 aa9.4□□□□□ -0.91
TUBA3D-201ENST00000321253 SNAPINO95295 136 aa9.4□□□□□ -0.91
TUBA3D-201ENST00000321253 APOMO95445 188 aa9.4□□□□□ -0.91
TUBA3D-201ENST00000321253 G0S2P27469 103 aa9.4□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms