RNA–Protein interactions for RNA: ENST00000318809.11

LTBP4-204, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 2

Gene LTBP4, Length 1,700 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-204ENST00000318809 A0A096LPF7 62 aa12.17□□□□□ -0.46
LTBP4-204ENST00000318809 PRSS29PA6NIE9 313 aa12.17□□□□□ -0.46
LTBP4-204ENST00000318809 ZFAND6Q6FIF0 208 aa12.17□□□□□ -0.46
LTBP4-204ENST00000318809 DDTP30046 118 aa12.16□□□□□ -0.46
LTBP4-204ENST00000318809 VCX2Q9H322 139 aa12.16□□□□□ -0.46
LTBP4-204ENST00000318809 TRBV25-1A0A075B6N4 114 aa12.15□□□□□ -0.46
LTBP4-204ENST00000318809 TIMM21Q9BVV7 248 aa12.15□□□□□ -0.46
LTBP4-204ENST00000318809 CST9LQ9H4G1 147 aa12.15□□□□□ -0.46
LTBP4-204ENST00000318809 UBE2D4Q9Y2X8 147 aa12.15□□□□□ -0.46
LTBP4-204ENST00000318809 ICOSQ9Y6W8 199 aa12.15□□□□□ -0.46
LTBP4-204ENST00000318809 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.14□□□□□ -0.47
LTBP4-204ENST00000318809 IGKV2-29A2NJV5 120 aaPredicted RBP12.14□□□□□ -0.47
LTBP4-204ENST00000318809 NUPR2A6NF83 97 aa12.14□□□□□ -0.47
LTBP4-204ENST00000318809 MRPL23Q16540 153 aaKnown RBP12.14□□□□□ -0.47
LTBP4-204ENST00000318809 MIEN1Q9BRT3 115 aa12.14□□□□□ -0.47
LTBP4-204ENST00000318809 TMEM243Q9BU79 118 aa12.14□□□□□ -0.47
LTBP4-204ENST00000318809 UQCR10Q9UDW1 63 aa12.14□□□□□ -0.47
LTBP4-204ENST00000318809 IGLV4-3A0A075B6K6 122 aa12.14□□□□□ -0.47
LTBP4-204ENST00000318809 H7C423 109 aa12.14□□□□□ -0.47
LTBP4-204ENST00000318809 DGAT2L7PQ6IED9 249 aa12.14□□□□□ -0.47
LTBP4-204ENST00000318809 ATP6V0E2Q8NHE4 81 aa12.14□□□□□ -0.47
LTBP4-204ENST00000318809 UBE2L6O14933 153 aa12.13□□□□□ -0.47
LTBP4-204ENST00000318809 IGLC3P0DOY3 106 aa12.13□□□□□ -0.47
LTBP4-204ENST00000318809 NTM-AS1Q6ZSK4 140 aa12.13□□□□□ -0.47
LTBP4-204ENST00000318809 TENM2Q9NT68 2774 aa12.12□□□□□ -0.47
LTBP4-204ENST00000318809 CSDC2Q9Y534 153 aaKnown RBP12.12□□□□□ -0.47
LTBP4-204ENST00000318809 TRBV6-8A0A0A6YYG3 113 aa12.11□□□□□ -0.47
LTBP4-204ENST00000318809 MRPS36P82909 103 aaKnown RBP12.11□□□□□ -0.47
LTBP4-204ENST00000318809 MRPL52Q86TS9 123 aaKnown RBP12.11□□□□□ -0.47
LTBP4-204ENST00000318809 STPG4Q8N801 248 aa12.11□□□□□ -0.47
LTBP4-204ENST00000318809 C15orf53Q8NAA6 179 aa12.11□□□□□ -0.47
LTBP4-204ENST00000318809 APLNQ9ULZ1 77 aa12.11□□□□□ -0.47
LTBP4-204ENST00000318809 KLK5Q9Y337 293 aaPredicted RBP12.11□□□□□ -0.47
LTBP4-204ENST00000318809 ZC2HC1BQ5TFG8 222 aa12.11□□□□□ -0.47
LTBP4-204ENST00000318809 SH2D6Q7Z4S9 175 aa12.11□□□□□ -0.47
LTBP4-204ENST00000318809 C2orf88Q9BSF0 95 aa12.11□□□□□ -0.47
LTBP4-204ENST00000318809 AMMECR1LQ6DCA0 310 aa12.1□□□□□ -0.47
LTBP4-204ENST00000318809 C14orf144Q96I85 54 aa12.1□□□□□ -0.47
LTBP4-204ENST00000318809 AMELXQ99217 191 aa12.1□□□□□ -0.47
LTBP4-204ENST00000318809 OPRPNQ99935 248 aaPredicted RBP12.1□□□□□ -0.47
LTBP4-204ENST00000318809 FGF6P10767 208 aa12.09□□□□□ -0.47
LTBP4-204ENST00000318809 TMEM101Q96IK0 257 aa12.09□□□□□ -0.47
LTBP4-204ENST00000318809 LYSTQ99698 3801 aa12.09□□□□□ -0.47
LTBP4-204ENST00000318809 ZNF25P17030 456 aaPredicted RBP12.08□□□□□ -0.47
LTBP4-204ENST00000318809 IGLV4-69A0A075B6H9 119 aa12.08□□□□□ -0.48
LTBP4-204ENST00000318809 LINC00587B1AMM8 73 aa12.08□□□□□ -0.48
LTBP4-204ENST00000318809 ESRGQ1W209 222 aa12.08□□□□□ -0.48
LTBP4-204ENST00000318809 ANKRD39Q53RE8 183 aa12.08□□□□□ -0.48
LTBP4-204ENST00000318809 SLC25A34Q6PIV7 304 aa12.08□□□□□ -0.48
LTBP4-204ENST00000318809 LYPD5Q6UWN5 251 aa12.08□□□□□ -0.48
LTBP4-204ENST00000318809 OR5A1Q8NGJ0 315 aa12.08□□□□□ -0.48
LTBP4-204ENST00000318809 COX8AP10176 69 aa12.07□□□□□ -0.48
LTBP4-204ENST00000318809 CHCHD5Q9BSY4 110 aa12.07□□□□□ -0.48
LTBP4-204ENST00000318809 HERVK_113P61574 105 aa12.06□□□□□ -0.48
LTBP4-204ENST00000318809 CASC10Q5T4H9 136 aa12.06□□□□□ -0.48
LTBP4-204ENST00000318809 Q6ZUT4 128 aa12.06□□□□□ -0.48
LTBP4-204ENST00000318809 NFE4Q86UQ8 179 aa12.06□□□□□ -0.48
LTBP4-204ENST00000318809 NMUP48645 174 aa12.06□□□□□ -0.48
LTBP4-204ENST00000318809 HNRNPA3P51991 378 aaKnown RBP12.06□□□□□ -0.48
LTBP4-204ENST00000318809 C11orf86A6NJI1 115 aa12.05□□□□□ -0.48
LTBP4-204ENST00000318809 FAM104AQ969W3 186 aa12.05□□□□□ -0.48
LTBP4-204ENST00000318809 CHAC1Q9BUX1 264 aa12.05□□□□□ -0.48
LTBP4-204ENST00000318809 C3orf84H3BNL1 204 aa12.04□□□□□ -0.48
LTBP4-204ENST00000318809 TCTAP57738 103 aa12.04□□□□□ -0.48
LTBP4-204ENST00000318809 TIRAPP58753 221 aa12.03□□□□□ -0.48
LTBP4-204ENST00000318809 TMEM170BQ5T4T1 132 aa12.03□□□□□ -0.48
LTBP4-204ENST00000318809 CDC42SE2Q9NRR3 84 aa12.03□□□□□ -0.48
LTBP4-204ENST00000318809 DLEU1O43261 78 aa12.03□□□□□ -0.48
LTBP4-204ENST00000318809 SEC11AP67812 179 aa12.03□□□□□ -0.48
LTBP4-204ENST00000318809 GAGE6Q13070 117 aa12.03□□□□□ -0.48
LTBP4-204ENST00000318809 RNASE13Q5GAN3 156 aaKnown RBP12.03□□□□□ -0.48
LTBP4-204ENST00000318809 LINC00588Q9Y4M8 146 aa12.03□□□□□ -0.48
LTBP4-204ENST00000318809 E9PLD3 99 aa12.02□□□□□ -0.49
LTBP4-204ENST00000318809 A0A0J9YXV3 536 aa12.01□□□□□ -0.49
LTBP4-204ENST00000318809 TINCRA0A1B0GVN0 87 aa12.01□□□□□ -0.49
LTBP4-204ENST00000318809 LELP1Q5T871 98 aa12.01□□□□□ -0.49
LTBP4-204ENST00000318809 BOD1L2Q8IYS8 172 aa12.01□□□□□ -0.49
LTBP4-204ENST00000318809 UBE2D1P51668 147 aa12□□□□□ -0.49
LTBP4-204ENST00000318809 GEMIN7Q9H840 131 aaKnown RBP12□□□□□ -0.49
LTBP4-204ENST00000318809 MRPS16Q9Y3D3 137 aaKnown RBP12□□□□□ -0.49
LTBP4-204ENST00000318809 CCL18P55774 89 aa12□□□□□ -0.49
LTBP4-204ENST00000318809 IGKV2D-26A0A0A0MRZ7 120 aa11.99□□□□□ -0.49
LTBP4-204ENST00000318809 TMEM262E9PQX1 116 aa11.99□□□□□ -0.49
LTBP4-204ENST00000318809 VPS13DQ5THJ4 4388 aa11.99□□□□□ -0.49
LTBP4-204ENST00000318809 A0A1B0GUV1 79 aa11.98□□□□□ -0.49
LTBP4-204ENST00000318809 ZNF22P17026 224 aaPredicted RBP11.98□□□□□ -0.49
LTBP4-204ENST00000318809 WFDC10BQ8IUB3 73 aa11.98□□□□□ -0.49
LTBP4-204ENST00000318809 DNAH1Q9P2D7 4330 aa11.98□□□□□ -0.49
LTBP4-204ENST00000318809 SIVA1O15304 175 aa11.97□□□□□ -0.49
LTBP4-204ENST00000318809 HERVK_113P63121 156 aa11.97□□□□□ -0.49
LTBP4-204ENST00000318809 CTAG1AP78358 180 aa11.97□□□□□ -0.49
LTBP4-204ENST00000318809 PCP2Q8IVA1 136 aa11.97□□□□□ -0.49
LTBP4-204ENST00000318809 TRAV8-6A0A0B4J262 113 aa11.97□□□□□ -0.49
LTBP4-204ENST00000318809 FAM19A3Q7Z5A8 133 aa11.97□□□□□ -0.49
LTBP4-204ENST00000318809 TMEM223A0PJW6 202 aa11.96□□□□□ -0.49
LTBP4-204ENST00000318809 H3BRM9 83 aa11.96□□□□□ -0.49
LTBP4-204ENST00000318809 Q8N3U1 123 aa11.96□□□□□ -0.49
LTBP4-204ENST00000318809 TRAV13-1A0A0B4J241 112 aa11.95□□□□□ -0.5
LTBP4-204ENST00000318809 M0R143 59 aa11.95□□□□□ -0.5
LTBP4-204ENST00000318809 LINC00469Q8N7U9 141 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms