RNA–Protein interactions for RNA: ENST00000318787.13

HDDC2-201, Transcript of HD domain containing 2, humanhuman

TSL 1 (best)

Gene HDDC2, Length 1,350 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-201ENST00000318787 ZNF25P17030 456 aaPredicted RBP10.42□□□□□ -0.74
HDDC2-201ENST00000318787 DGAT2L7PQ6IED9 249 aa10.42□□□□□ -0.74
HDDC2-201ENST00000318787 NRACQ8N912 160 aa10.42□□□□□ -0.74
HDDC2-201ENST00000318787 CLRN3Q8NCR9 226 aa10.42□□□□□ -0.74
HDDC2-201ENST00000318787 CHCHD10Q8WYQ3 142 aaPredicted RBP10.42□□□□□ -0.74
HDDC2-201ENST00000318787 KIR2DL4Q99706 377 aa10.42□□□□□ -0.74
HDDC2-201ENST00000318787 F8W036 122 aa10.41□□□□□ -0.74
HDDC2-201ENST00000318787 ESDP10768 282 aa10.41□□□□□ -0.74
HDDC2-201ENST00000318787 HIGD2BQ4VC39 106 aa10.41□□□□□ -0.74
HDDC2-201ENST00000318787 CHAC1Q9BUX1 264 aa10.41□□□□□ -0.74
HDDC2-201ENST00000318787 PPP1R2P9O14990 202 aa10.4□□□□□ -0.74
HDDC2-201ENST00000318787 XCL1P47992 114 aa10.4□□□□□ -0.74
HDDC2-201ENST00000318787 VPS13BQ7Z7G8 4022 aa10.4□□□□□ -0.75
HDDC2-201ENST00000318787 D6R8Y8 96 aa10.39□□□□□ -0.75
HDDC2-201ENST00000318787 CIRBP-AS1Q8TBR5 109 aa10.39□□□□□ -0.75
HDDC2-201ENST00000318787 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.39□□□□□ -0.75
HDDC2-201ENST00000318787 LINC00862A6NCI5 91 aa10.39□□□□□ -0.75
HDDC2-201ENST00000318787 CCL25O15444 150 aa10.39□□□□□ -0.75
HDDC2-201ENST00000318787 PLA2G1BP04054 148 aaKnown RBP10.39□□□□□ -0.75
HDDC2-201ENST00000318787 PNRC1Q12796 327 aaPredicted RBP10.39□□□□□ -0.75
HDDC2-201ENST00000318787 RNASE13Q5GAN3 156 aaKnown RBP10.39□□□□□ -0.75
HDDC2-201ENST00000318787 CFAP161Q6P656 301 aa10.39□□□□□ -0.75
HDDC2-201ENST00000318787 C9orf163Q8N9P6 203 aa10.39□□□□□ -0.75
HDDC2-201ENST00000318787 LINC00959A0A1B0GUT2 108 aa10.38□□□□□ -0.75
HDDC2-201ENST00000318787 A0A1B0GXF2 115 aa10.38□□□□□ -0.75
HDDC2-201ENST00000318787 TNFRSF6BO95407 300 aa10.38□□□□□ -0.75
HDDC2-201ENST00000318787 MT-ND4LP03901 98 aa10.38□□□□□ -0.75
HDDC2-201ENST00000318787 SS18Q15532 418 aa10.38□□□□□ -0.75
HDDC2-201ENST00000318787 CLLU1Q5K131 121 aa10.38□□□□□ -0.75
HDDC2-201ENST00000318787 C15orf56Q8N910 161 aa10.38□□□□□ -0.75
HDDC2-201ENST00000318787 NPYP01303 97 aa10.37□□□□□ -0.75
HDDC2-201ENST00000318787 MRPL52Q86TS9 123 aaKnown RBP10.37□□□□□ -0.75
HDDC2-201ENST00000318787 ZNF664Q8N3J9 261 aa10.37□□□□□ -0.75
HDDC2-201ENST00000318787 DPH3Q96FX2 82 aa10.37□□□□□ -0.75
HDDC2-201ENST00000318787 CDC42SE2Q9NRR3 84 aa10.37□□□□□ -0.75
HDDC2-201ENST00000318787 IGHV3-64A0A075B6Q5 118 aa10.36□□□□□ -0.75
HDDC2-201ENST00000318787 SMAGPQ0VAQ4 97 aa10.36□□□□□ -0.75
HDDC2-201ENST00000318787 FOXI1Q12951 378 aa10.36□□□□□ -0.75
HDDC2-201ENST00000318787 TMEM18Q96B42 140 aa10.36□□□□□ -0.75
HDDC2-201ENST00000318787 ANAPC16Q96DE5 110 aa10.36□□□□□ -0.75
HDDC2-201ENST00000318787 C20orf78Q9BR46 151 aa10.36□□□□□ -0.75
HDDC2-201ENST00000318787 CNBPP62633 177 aaKnown RBP10.35□□□□□ -0.75
HDDC2-201ENST00000318787 ATP5L2Q7Z4Y8 100 aa10.35□□□□□ -0.75
HDDC2-201ENST00000318787 SMIM2Q9BVW6 85 aa10.35□□□□□ -0.75
HDDC2-201ENST00000318787 UBE2D4Q9Y2X8 147 aa10.35□□□□□ -0.75
HDDC2-201ENST00000318787 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.35□□□□□ -0.75
HDDC2-201ENST00000318787 HERC1Q15751 4861 aa10.34□□□□□ -0.75
HDDC2-201ENST00000318787 TCAPO15273 167 aa10.34□□□□□ -0.75
HDDC2-201ENST00000318787 SLPIP03973 132 aa10.34□□□□□ -0.75
HDDC2-201ENST00000318787 ORMDL3Q8N138 153 aa10.34□□□□□ -0.75
HDDC2-201ENST00000318787 TRBV24-1A0A075B6N3 115 aa10.33□□□□□ -0.76
HDDC2-201ENST00000318787 TRAV13-1A0A0B4J241 112 aa10.33□□□□□ -0.76
HDDC2-201ENST00000318787 PPBPP02775 128 aa10.33□□□□□ -0.76
HDDC2-201ENST00000318787 RPL39P62891 51 aaKnown RBP10.33□□□□□ -0.76
HDDC2-201ENST00000318787 IFITM2Q01629 132 aa10.33□□□□□ -0.76
HDDC2-201ENST00000318787 TMEM136Q6ZRR5 245 aa10.33□□□□□ -0.76
HDDC2-201ENST00000318787 Q6ZUT4 128 aa10.33□□□□□ -0.76
HDDC2-201ENST00000318787 PRELID3AQ96N28 172 aa10.33□□□□□ -0.76
HDDC2-201ENST00000318787 SRRM2Q9UQ35 2752 aaKnown RBP10.32□□□□□ -0.76
HDDC2-201ENST00000318787 PANO1I0J062 215 aa10.32□□□□□ -0.76
HDDC2-201ENST00000318787 CHTF8P0CG12 524 aa10.32□□□□□ -0.76
HDDC2-201ENST00000318787 SDIM1Q6ZPB5 146 aa10.32□□□□□ -0.76
HDDC2-201ENST00000318787 LINC00526Q96FQ7 95 aa10.32□□□□□ -0.76
HDDC2-201ENST00000318787 FLG2Q5D862 2391 aaPredicted RBP10.32□□□□□ -0.76
HDDC2-201ENST00000318787 LOC389332A0A1B0GUA5 103 aa10.31□□□□□ -0.76
HDDC2-201ENST00000318787 MALP21145 153 aa10.31□□□□□ -0.76
HDDC2-201ENST00000318787 MYCBP2O75592 4640 aa10.31□□□□□ -0.76
HDDC2-201ENST00000318787 GVQW2A0A096LPI5 108 aaPredicted RBP10.3□□□□□ -0.76
HDDC2-201ENST00000318787 IGHV1-58A0A0C4DH39 117 aa10.3□□□□□ -0.76
HDDC2-201ENST00000318787 RAB5AP20339 215 aa10.3□□□□□ -0.76
HDDC2-201ENST00000318787 CD164L2Q6UWJ8 174 aa10.3□□□□□ -0.76
HDDC2-201ENST00000318787 IGKV2-24A0A0C4DH68 120 aa10.29□□□□□ -0.76
HDDC2-201ENST00000318787 C1orf196B1AJZ1 125 aa10.29□□□□□ -0.76
HDDC2-201ENST00000318787 PHOX2AO14813 284 aa10.29□□□□□ -0.76
HDDC2-201ENST00000318787 ADCYAP1P18509 176 aa10.29□□□□□ -0.76
HDDC2-201ENST00000318787 RPL32P62910 135 aaKnown RBP10.29□□□□□ -0.76
HDDC2-201ENST00000318787 COX6A2Q02221 97 aa10.29□□□□□ -0.76
HDDC2-201ENST00000318787 CSDC2Q9Y534 153 aaKnown RBP10.29□□□□□ -0.76
HDDC2-201ENST00000318787 ZNF561-AS1K7EIQ3 104 aa10.28□□□□□ -0.76
HDDC2-201ENST00000318787 UQCC3Q6UW78 93 aa10.28□□□□□ -0.76
HDDC2-201ENST00000318787 OPRPNQ99935 248 aaPredicted RBP10.28□□□□□ -0.76
HDDC2-201ENST00000318787 MAP1LC3AQ9H492 121 aa10.28□□□□□ -0.76
HDDC2-201ENST00000318787 TMEM218A2RU14 115 aa10.27□□□□□ -0.76
HDDC2-201ENST00000318787 COX7A2LO14548 114 aa10.27□□□□□ -0.76
HDDC2-201ENST00000318787 RPL37AP61513 92 aaKnown RBP10.27□□□□□ -0.76
HDDC2-201ENST00000318787 COMMD7Q86VX2 200 aa10.27□□□□□ -0.76
HDDC2-201ENST00000318787 TIMM21Q9BVV7 248 aa10.27□□□□□ -0.76
HDDC2-201ENST00000318787 DMBT1Q9UGM3 2413 aaPredicted RBP10.27□□□□□ -0.76
HDDC2-201ENST00000318787 C5orf38Q86SI9 138 aa10.26□□□□□ -0.77
HDDC2-201ENST00000318787 PRSS3P2Q8NHM4 247 aa10.26□□□□□ -0.77
HDDC2-201ENST00000318787 CARD19Q96LW7 228 aa10.26□□□□□ -0.77
HDDC2-201ENST00000318787 CTDSP1Q9GZU7 261 aa10.26□□□□□ -0.77
HDDC2-201ENST00000318787 MAJINQ3KP22 176 aa10.26□□□□□ -0.77
HDDC2-201ENST00000318787 SPANXA1Q9NS26 97 aa10.26□□□□□ -0.77
HDDC2-201ENST00000318787 A0A087WYN8 130 aa10.25□□□□□ -0.77
HDDC2-201ENST00000318787 IFITM10A6NMD0 228 aa10.25□□□□□ -0.77
HDDC2-201ENST00000318787 IFI27P40305 119 aaPredicted RBP10.25□□□□□ -0.77
HDDC2-201ENST00000318787 SPACA4Q8TDM5 124 aa10.25□□□□□ -0.77
HDDC2-201ENST00000318787 IGLV4-69A0A075B6H9 119 aa10.24□□□□□ -0.77
HDDC2-201ENST00000318787 LAMTOR2Q9Y2Q5 125 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms