RNA–Protein interactions for RNA: ENST00000315491.11

TUBB3-201, Transcript of tubulin beta 3 class III, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB3, Length 1,769 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-201ENST00000315491 ODF1Q14990 250 aa11.34□□□□□ -0.59
TUBB3-201ENST00000315491 RHOHQ15669 191 aa11.34□□□□□ -0.59
TUBB3-201ENST00000315491 PRO0255Q9UI72 69 aa11.34□□□□□ -0.59
TUBB3-201ENST00000315491 TRBV10-1A0A0K0K1A3 114 aa11.33□□□□□ -0.59
TUBB3-201ENST00000315491 CRYBA4P53673 196 aa11.33□□□□□ -0.59
TUBB3-201ENST00000315491 ATP6V0E2Q8NHE4 81 aa11.33□□□□□ -0.59
TUBB3-201ENST00000315491 PRO0461Q9UI25 63 aa11.33□□□□□ -0.59
TUBB3-201ENST00000315491 TRBV25-1A0A075B6N4 114 aa11.33□□□□□ -0.6
TUBB3-201ENST00000315491 TRBV6-5A0A0K0K1A5 114 aa11.33□□□□□ -0.6
TUBB3-201ENST00000315491 ATP5LO75964 103 aa11.33□□□□□ -0.6
TUBB3-201ENST00000315491 FCER1GP30273 86 aa11.33□□□□□ -0.6
TUBB3-201ENST00000315491 NEXN-AS1Q8NBZ9 246 aa11.33□□□□□ -0.6
TUBB3-201ENST00000315491 DNAJC30Q96LL9 226 aa11.33□□□□□ -0.6
TUBB3-201ENST00000315491 PRADC1Q9BSG0 188 aa11.33□□□□□ -0.6
TUBB3-201ENST00000315491 MAP1LC3AQ9H492 121 aa11.33□□□□□ -0.6
TUBB3-201ENST00000315491 NHP2Q9NX24 153 aaKnown RBP11.33□□□□□ -0.6
TUBB3-201ENST00000315491 Q9UF83 564 aa11.33□□□□□ -0.6
TUBB3-201ENST00000315491 IGKV2D-26A0A0A0MRZ7 120 aa11.32□□□□□ -0.6
TUBB3-201ENST00000315491 K7ERJ3 54 aa11.32□□□□□ -0.6
TUBB3-201ENST00000315491 IGKCP01834 107 aa11.32□□□□□ -0.6
TUBB3-201ENST00000315491 GAGE13Q4V321 117 aa11.32□□□□□ -0.6
TUBB3-201ENST00000315491 C20orf78Q9BR46 151 aa11.32□□□□□ -0.6
TUBB3-201ENST00000315491 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.31□□□□□ -0.6
TUBB3-201ENST00000315491 TCTAP57738 103 aa11.31□□□□□ -0.6
TUBB3-201ENST00000315491 SUMO2P61956 95 aaKnown RBP11.31□□□□□ -0.6
TUBB3-201ENST00000315491 TNFRSF18Q9Y5U5 241 aa11.31□□□□□ -0.6
TUBB3-201ENST00000315491 TRAV26-1A0A087WT03 109 aa11.31□□□□□ -0.6
TUBB3-201ENST00000315491 PAX4O43316 350 aa11.31□□□□□ -0.6
TUBB3-201ENST00000315491 DEFB131BA0A096LNP1 70 aa11.3□□□□□ -0.6
TUBB3-201ENST00000315491 LOC100131303A0A0U1RQF7 123 aa11.3□□□□□ -0.6
TUBB3-201ENST00000315491 A0A1B0GWB2 263 aa11.3□□□□□ -0.6
TUBB3-201ENST00000315491 DPM2O94777 84 aa11.3□□□□□ -0.6
TUBB3-201ENST00000315491 RPL36AP83881 106 aaKnown RBP11.3□□□□□ -0.6
TUBB3-201ENST00000315491 ZNRF2Q8NHG8 242 aa11.3□□□□□ -0.6
TUBB3-201ENST00000315491 RPL36ALQ969Q0 106 aaKnown RBP11.3□□□□□ -0.6
TUBB3-201ENST00000315491 VSIG2Q96IQ7 327 aa11.3□□□□□ -0.6
TUBB3-201ENST00000315491 NXT2Q9NPJ8 142 aaKnown RBP11.3□□□□□ -0.6
TUBB3-201ENST00000315491 TRBV7-3A0A075B6L6 115 aa11.29□□□□□ -0.6
TUBB3-201ENST00000315491 TRAV10A0A0B4J240 114 aa11.29□□□□□ -0.6
TUBB3-201ENST00000315491 A0A0J9YY99 117 aa11.29□□□□□ -0.6
TUBB3-201ENST00000315491 GAGE12JA6NER3 117 aa11.29□□□□□ -0.6
TUBB3-201ENST00000315491 SDHAF1A6NFY7 115 aa11.29□□□□□ -0.6
TUBB3-201ENST00000315491 GAGE4Q13068 117 aa11.29□□□□□ -0.6
TUBB3-201ENST00000315491 GAGE5Q13069 117 aa11.29□□□□□ -0.6
TUBB3-201ENST00000315491 ETDBQ3ZM63 59 aa11.29□□□□□ -0.6
TUBB3-201ENST00000315491 GEMIN7Q9H840 131 aaKnown RBP11.29□□□□□ -0.6
TUBB3-201ENST00000315491 GYPEP15421 78 aa11.28□□□□□ -0.6
TUBB3-201ENST00000315491 POLR2KP53803 58 aaKnown RBP11.28□□□□□ -0.6
TUBB3-201ENST00000315491 SH2D6Q7Z4S9 175 aa11.28□□□□□ -0.6
TUBB3-201ENST00000315491 SMIM2Q9BVW6 85 aa11.28□□□□□ -0.6
TUBB3-201ENST00000315491 CYSLTR1Q9Y271 337 aa11.28□□□□□ -0.6
TUBB3-201ENST00000315491 RPL32P62910 135 aaKnown RBP11.28□□□□□ -0.6
TUBB3-201ENST00000315491 IGLV2-18A0A075B6J9 118 aa11.27□□□□□ -0.61
TUBB3-201ENST00000315491 H3BMG7 143 aa11.27□□□□□ -0.61
TUBB3-201ENST00000315491 VCYO14598 125 aa11.27□□□□□ -0.61
TUBB3-201ENST00000315491 Q8N8P6 123 aa11.27□□□□□ -0.61
TUBB3-201ENST00000315491 UBE2D3P61077 147 aa11.26□□□□□ -0.61
TUBB3-201ENST00000315491 UBE2D2P62837 147 aa11.26□□□□□ -0.61
TUBB3-201ENST00000315491 TRBV27A0A0K0K1C4 114 aa11.26□□□□□ -0.61
TUBB3-201ENST00000315491 LINC00694P0DN24 101 aa11.26□□□□□ -0.61
TUBB3-201ENST00000315491 I3L3M4 83 aa11.25□□□□□ -0.61
TUBB3-201ENST00000315491 TSPAN13O95857 204 aa11.25□□□□□ -0.61
TUBB3-201ENST00000315491 PRSS1P07477 247 aa11.25□□□□□ -0.61
TUBB3-201ENST00000315491 FOXI1Q12951 378 aa11.25□□□□□ -0.61
TUBB3-201ENST00000315491 ZC2HC1BQ5TFG8 222 aa11.25□□□□□ -0.61
TUBB3-201ENST00000315491 TTTY13Q9BZ97 58 aa11.25□□□□□ -0.61
TUBB3-201ENST00000315491 VCX2Q9H322 139 aa11.25□□□□□ -0.61
TUBB3-201ENST00000315491 IGHV3-38A0A0C4DH36 116 aa11.24□□□□□ -0.61
TUBB3-201ENST00000315491 H3BNG1 76 aa11.24□□□□□ -0.61
TUBB3-201ENST00000315491 DAZ4Q86SG3 579 aaKnown RBP11.24□□□□□ -0.61
TUBB3-201ENST00000315491 CDIP1Q9H305 208 aa11.24□□□□□ -0.61
TUBB3-201ENST00000315491 DAZ3Q9NR90 486 aaKnown RBP11.24□□□□□ -0.61
TUBB3-201ENST00000315491 APOMO95445 188 aa11.23□□□□□ -0.61
TUBB3-201ENST00000315491 MAPKAPK5-AS1Q8N8E1 139 aa11.23□□□□□ -0.61
TUBB3-201ENST00000315491 KIR2DL4Q99706 377 aa11.23□□□□□ -0.61
TUBB3-201ENST00000315491 ICOSQ9Y6W8 199 aa11.23□□□□□ -0.61
TUBB3-201ENST00000315491 MRPL23Q16540 153 aaKnown RBP11.23□□□□□ -0.61
TUBB3-201ENST00000315491 DEFB104AQ8WTQ1 72 aa11.23□□□□□ -0.61
TUBB3-201ENST00000315491 FBN3Q75N90 2809 aa11.23□□□□□ -0.61
TUBB3-201ENST00000315491 COL7A1Q02388 2944 aa11.22□□□□□ -0.61
TUBB3-201ENST00000315491 A0A096LPF7 62 aa11.21□□□□□ -0.61
TUBB3-201ENST00000315491 TSHBP01222 138 aa11.21□□□□□ -0.61
TUBB3-201ENST00000315491 HIST1H4GQ99525 98 aa11.21□□□□□ -0.61
TUBB3-201ENST00000315491 A0A087WX48 190 aa11.21□□□□□ -0.62
TUBB3-201ENST00000315491 K7EMI3 77 aa11.21□□□□□ -0.62
TUBB3-201ENST00000315491 SPINK8P0C7L1 97 aa11.21□□□□□ -0.62
TUBB3-201ENST00000315491 PLNP26678 52 aa11.21□□□□□ -0.62
TUBB3-201ENST00000315491 ERG28Q9UKR5 140 aa11.21□□□□□ -0.62
TUBB3-201ENST00000315491 LAGE3Q14657 143 aa11.2□□□□□ -0.62
TUBB3-201ENST00000315491 ORMDL2Q53FV1 153 aa11.19□□□□□ -0.62
TUBB3-201ENST00000315491 MRPL35Q9NZE8 188 aaKnown RBP11.19□□□□□ -0.62
TUBB3-201ENST00000315491 STAB2Q8WWQ8 2551 aa11.19□□□□□ -0.62
TUBB3-201ENST00000315491 TRAV12-1A0A0B4J245 112 aa11.18□□□□□ -0.62
TUBB3-201ENST00000315491 Q6ZUT4 128 aa11.18□□□□□ -0.62
TUBB3-201ENST00000315491 SMCPP49901 116 aaPredicted RBP11.18□□□□□ -0.62
TUBB3-201ENST00000315491 CEMP1Q6PRD7 247 aaPredicted RBP11.18□□□□□ -0.62
TUBB3-201ENST00000315491 C15orf53Q8NAA6 179 aa11.18□□□□□ -0.62
TUBB3-201ENST00000315491 PPDPFLQ8WWR9 84 aa11.18□□□□□ -0.62
TUBB3-201ENST00000315491 MYMXA0A1B0GTQ4 84 aa11.17□□□□□ -0.62
TUBB3-201ENST00000315491 LYRM7Q5U5X0 104 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms