RNA–Protein interactions for RNA: ENST00000314759.5

SKA3-202, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SKA3, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-202ENST00000314759 IGHV3-53P01767 116 aa9.7□□□□□ -0.86
SKA3-202ENST00000314759 SLURP1P55000 103 aa9.7□□□□□ -0.86
SKA3-202ENST00000314759 COX6A2Q02221 97 aa9.7□□□□□ -0.86
SKA3-202ENST00000314759 C11orf72Q8NBR9 251 aa9.7□□□□□ -0.86
SKA3-202ENST00000314759 FLNCQ14315 2725 aa9.7□□□□□ -0.86
SKA3-202ENST00000314759 IGLV5-45A0A087WSX0 123 aa9.7□□□□□ -0.86
SKA3-202ENST00000314759 TIRAPP58753 221 aa9.69□□□□□ -0.86
SKA3-202ENST00000314759 NRGNQ92686 78 aa9.69□□□□□ -0.86
SKA3-202ENST00000314759 ZNF702PQ9H963 129 aa9.69□□□□□ -0.86
SKA3-202ENST00000314759 CFAP46Q8IYW2 2715 aa9.69□□□□□ -0.86
SKA3-202ENST00000314759 MXRA5Q9NR99 2828 aa9.69□□□□□ -0.86
SKA3-202ENST00000314759 ZNF625Q96I27 306 aaPredicted RBP9.69□□□□□ -0.86
SKA3-202ENST00000314759 DNAJC30Q96LL9 226 aa9.69□□□□□ -0.86
SKA3-202ENST00000314759 IGHV3OR16-12A0A075B7B8 117 aa9.68□□□□□ -0.86
SKA3-202ENST00000314759 PPDPFQ9H3Y8 114 aa9.68□□□□□ -0.86
SKA3-202ENST00000314759 PRORYQ9H606 182 aa9.68□□□□□ -0.86
SKA3-202ENST00000314759 PIEZO1Q92508 2521 aa9.68□□□□□ -0.86
SKA3-202ENST00000314759 Q8N2B8 174 aa9.68□□□□□ -0.86
SKA3-202ENST00000314759 LINC00308Q8TCZ7 52 aa9.68□□□□□ -0.86
SKA3-202ENST00000314759 USP9XQ93008 2570 aaPredicted RBP9.68□□□□□ -0.86
SKA3-202ENST00000314759 BEAN1Q3B7T3 259 aa9.67□□□□□ -0.86
SKA3-202ENST00000314759 DGAT2L7PQ6IED9 249 aa9.67□□□□□ -0.86
SKA3-202ENST00000314759 Q9H8V8 135 aa9.67□□□□□ -0.86
SKA3-202ENST00000314759 VPREB3Q9UKI3 123 aa9.67□□□□□ -0.86
SKA3-202ENST00000314759 DOPEY1Q5JWR5 2465 aa9.67□□□□□ -0.86
SKA3-202ENST00000314759 CIRBPQ14011 172 aaKnown RBP9.67□□□□□ -0.86
SKA3-202ENST00000314759 LINC01356Q8N9X3 169 aa9.67□□□□□ -0.86
SKA3-202ENST00000314759 CUBNO60494 3623 aa9.67□□□□□ -0.86
SKA3-202ENST00000314759 LINC00242Q5T6M2 205 aa9.66□□□□□ -0.86
SKA3-202ENST00000314759 MAPK1IP1LQ8NDC0 245 aa9.66□□□□□ -0.86
SKA3-202ENST00000314759 UTP20O75691 2785 aaKnown RBP9.66□□□□□ -0.86
SKA3-202ENST00000314759 IGLV5-39A0A0G2JS06 123 aa9.66□□□□□ -0.86
SKA3-202ENST00000314759 RS1O15537 224 aa9.66□□□□□ -0.86
SKA3-202ENST00000314759 NDUFA7O95182 113 aa9.65□□□□□ -0.86
SKA3-202ENST00000314759 MAP6D1Q9H9H5 199 aa9.65□□□□□ -0.86
SKA3-202ENST00000314759 LINC00694P0DN24 101 aa9.65□□□□□ -0.87
SKA3-202ENST00000314759 SOSTDC1Q6X4U4 206 aa9.65□□□□□ -0.87
SKA3-202ENST00000314759 HERVK_113P63121 156 aa9.64□□□□□ -0.87
SKA3-202ENST00000314759 TMEM126AQ9H061 195 aa9.64□□□□□ -0.87
SKA3-202ENST00000314759 POLQO75417 2590 aa9.64□□□□□ -0.87
SKA3-202ENST00000314759 PKD1L2Q7Z442 2459 aa9.64□□□□□ -0.87
SKA3-202ENST00000314759 DAZ2Q13117 558 aaKnown RBP9.64□□□□□ -0.87
SKA3-202ENST00000314759 DAZ4Q86SG3 579 aaKnown RBP9.64□□□□□ -0.87
SKA3-202ENST00000314759 DAZ3Q9NR90 486 aaKnown RBP9.64□□□□□ -0.87
SKA3-202ENST00000314759 MYO9AB2RTY4 2548 aa9.64□□□□□ -0.87
SKA3-202ENST00000314759 Q6YL49 198 aa9.63□□□□□ -0.87
SKA3-202ENST00000314759 A0A096LNT2 108 aa9.63□□□□□ -0.87
SKA3-202ENST00000314759 SMIM1B2RUZ4 78 aa9.63□□□□□ -0.87
SKA3-202ENST00000314759 COX7A2LO14548 114 aa9.63□□□□□ -0.87
SKA3-202ENST00000314759 C22orf24Q9Y442 160 aa9.63□□□□□ -0.87
SKA3-202ENST00000314759 DSCR9P59020 149 aa9.62□□□□□ -0.87
SKA3-202ENST00000314759 INSP01308 110 aa9.62□□□□□ -0.87
SKA3-202ENST00000314759 C9orf153Q5TBE3 101 aa9.62□□□□□ -0.87
SKA3-202ENST00000314759 KLK5Q9Y337 293 aaPredicted RBP9.62□□□□□ -0.87
SKA3-202ENST00000314759 TRAV13-1A0A0B4J241 112 aa9.62□□□□□ -0.87
SKA3-202ENST00000314759 J3QLI3 93 aa9.62□□□□□ -0.87
SKA3-202ENST00000314759 ACYP1P07311 99 aa9.62□□□□□ -0.87
SKA3-202ENST00000314759 FAM218AQ96MZ4 157 aa9.62□□□□□ -0.87
SKA3-202ENST00000314759 IMUPQ9GZP8 106 aa9.62□□□□□ -0.87
SKA3-202ENST00000314759 XCL2Q9UBD3 114 aa9.62□□□□□ -0.87
SKA3-202ENST00000314759 C2CD3Q4AC94 2353 aa9.62□□□□□ -0.87
SKA3-202ENST00000314759 HIST2H2BDQ6DRA6 164 aa9.61□□□□□ -0.87
SKA3-202ENST00000314759 ANKRD17O75179 2603 aaKnown RBP9.61□□□□□ -0.87
SKA3-202ENST00000314759 BAALC-AS2P0C853 105 aa9.61□□□□□ -0.87
SKA3-202ENST00000314759 LINC00643Q86TS7 51 aa9.61□□□□□ -0.87
SKA3-202ENST00000314759 C3orf22Q8N5N4 141 aa9.61□□□□□ -0.87
SKA3-202ENST00000314759 PEMTQ9UBM1 199 aa9.61□□□□□ -0.87
SKA3-202ENST00000314759 LOC107984640A0A0U1RRK4 108 aa9.6□□□□□ -0.87
SKA3-202ENST00000314759 NTM-AS1Q6ZSK4 140 aa9.6□□□□□ -0.87
SKA3-202ENST00000314759 FAM19A3Q7Z5A8 133 aa9.6□□□□□ -0.87
SKA3-202ENST00000314759 PRIMA1Q86XR5 153 aa9.6□□□□□ -0.87
SKA3-202ENST00000314759 DEFB114Q30KQ6 69 aa9.59□□□□□ -0.87
SKA3-202ENST00000314759 DYNLRB2Q8TF09 96 aa9.59□□□□□ -0.87
SKA3-202ENST00000314759 TRGV1A0A0A0MS02 117 aa9.59□□□□□ -0.87
SKA3-202ENST00000314759 F5H768 121 aa9.59□□□□□ -0.87
SKA3-202ENST00000314759 FSHBP01225 129 aa9.59□□□□□ -0.87
SKA3-202ENST00000314759 CSDC2Q9Y534 153 aaKnown RBP9.59□□□□□ -0.87
SKA3-202ENST00000314759 CENPEQ02224 2701 aa9.58□□□□□ -0.88
SKA3-202ENST00000314759 C1orf158Q8N1D5 194 aa9.58□□□□□ -0.88
SKA3-202ENST00000314759 Q9HAA7 133 aa9.58□□□□□ -0.88
SKA3-202ENST00000314759 NOTCH3Q9UM47 2321 aa9.58□□□□□ -0.88
SKA3-202ENST00000314759 FBN2P35556 2912 aa9.58□□□□□ -0.88
SKA3-202ENST00000314759 KHDC1LQ5JSQ8 128 aa9.58□□□□□ -0.88
SKA3-202ENST00000314759 SDIM1Q6ZPB5 146 aa9.58□□□□□ -0.88
SKA3-202ENST00000314759 COPS9Q8WXC6 57 aa9.58□□□□□ -0.88
SKA3-202ENST00000314759 CDC42SE2Q9NRR3 84 aa9.58□□□□□ -0.88
SKA3-202ENST00000314759 MYO18BQ8IUG5 2567 aa9.57□□□□□ -0.88
SKA3-202ENST00000314759 RPL36AP83881 106 aaKnown RBP9.57□□□□□ -0.88
SKA3-202ENST00000314759 IL17DQ8TAD2 202 aa9.57□□□□□ -0.88
SKA3-202ENST00000314759 C4orf3Q8WVX3 66 aa9.57□□□□□ -0.88
SKA3-202ENST00000314759 RPL36ALQ969Q0 106 aaKnown RBP9.57□□□□□ -0.88
SKA3-202ENST00000314759 ACACBO00763 2458 aa9.56□□□□□ -0.88
SKA3-202ENST00000314759 UQCRQO14949 82 aa9.56□□□□□ -0.88
SKA3-202ENST00000314759 ODF3L2Q3SX64 289 aa9.56□□□□□ -0.88
SKA3-202ENST00000314759 GAGE2AQ6NT46 116 aa9.56□□□□□ -0.88
SKA3-202ENST00000314759 Q96MF0 132 aa9.56□□□□□ -0.88
SKA3-202ENST00000314759 TRACP01848 142 aa9.56□□□□□ -0.88
SKA3-202ENST00000314759 Q6ZTI0 123 aa9.56□□□□□ -0.88
SKA3-202ENST00000314759 LINC00526Q96FQ7 95 aa9.56□□□□□ -0.88
SKA3-202ENST00000314759 CHD6Q8TD26 2715 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms