RNA–Protein interactions for RNA: ENST00000309017.7

PTPN7-201, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPN7, Length 3,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-201ENST00000309017 IGHV4-59P01825 116 aa8.17□□□□□ -1.1
PTPN7-201ENST00000309017 LINC00467Q9BRT7 94 aa8.17□□□□□ -1.1
PTPN7-201ENST00000309017 SPANXA1Q9NS26 97 aa8.17□□□□□ -1.1
PTPN7-201ENST00000309017 TRAV13-1A0A0B4J241 112 aa8.16□□□□□ -1.1
PTPN7-201ENST00000309017 C19orf84I3L1E1 186 aa8.16□□□□□ -1.1
PTPN7-201ENST00000309017 MSMBP08118 114 aa8.16□□□□□ -1.1
PTPN7-201ENST00000309017 ZNF415Q09FC8 603 aa8.16□□□□□ -1.1
PTPN7-201ENST00000309017 FAM236AA0A1B0GUQ0 79 aa8.15□□□□□ -1.1
PTPN7-201ENST00000309017 FAM236BA0A1B0GV22 79 aa8.15□□□□□ -1.1
PTPN7-201ENST00000309017 HERV-K104P63124 156 aa8.15□□□□□ -1.1
PTPN7-201ENST00000309017 PRIMA1Q86XR5 153 aa8.15□□□□□ -1.1
PTPN7-201ENST00000309017 UBE2D4Q9Y2X8 147 aa8.15□□□□□ -1.11
PTPN7-201ENST00000309017 FLNCQ14315 2725 aa8.14□□□□□ -1.11
PTPN7-201ENST00000309017 IGHV4-30-2A0A087WSY4 118 aa8.14□□□□□ -1.11
PTPN7-201ENST00000309017 HOXD3P31249 432 aaPredicted RBP8.14□□□□□ -1.11
PTPN7-201ENST00000309017 PSMB8P28062 276 aa8.14□□□□□ -1.11
PTPN7-201ENST00000309017 RBMY1A1P0DJD3 496 aaKnown RBP8.13□□□□□ -1.11
PTPN7-201ENST00000309017 RBMY1CP0DJD4 496 aa8.13□□□□□ -1.11
PTPN7-201ENST00000309017 RBMY1FQ15415 496 aaKnown RBP8.13□□□□□ -1.11
PTPN7-201ENST00000309017 Q6ZSN1 163 aa8.13□□□□□ -1.11
PTPN7-201ENST00000309017 BRI3O95415 125 aa8.13□□□□□ -1.11
PTPN7-201ENST00000309017 DEFB136Q30KP8 78 aa8.13□□□□□ -1.11
PTPN7-201ENST00000309017 GCN1Q92616 2671 aaKnown RBP8.13□□□□□ -1.11
PTPN7-201ENST00000309017 DEFB112Q30KQ8 113 aa8.13□□□□□ -1.11
PTPN7-201ENST00000309017 CHCHD7Q9BUK0 85 aa8.13□□□□□ -1.11
PTPN7-201ENST00000309017 LINC00308Q8TCZ7 52 aa8.12□□□□□ -1.11
PTPN7-201ENST00000309017 IGHV3-53P01767 116 aa8.12□□□□□ -1.11
PTPN7-201ENST00000309017 MRPL23Q16540 153 aaKnown RBP8.12□□□□□ -1.11
PTPN7-201ENST00000309017 C10orf105Q8TEF2 133 aa8.12□□□□□ -1.11
PTPN7-201ENST00000309017 DYNLRB2Q8TF09 96 aa8.12□□□□□ -1.11
PTPN7-201ENST00000309017 IGKV3OR2-268A0A0C4DH90 116 aa8.12□□□□□ -1.11
PTPN7-201ENST00000309017 GNLYP22749 145 aa8.12□□□□□ -1.11
PTPN7-201ENST00000309017 COPS9Q8WXC6 57 aa8.12□□□□□ -1.11
PTPN7-201ENST00000309017 AVPP01185 164 aa8.11□□□□□ -1.11
PTPN7-201ENST00000309017 NBPF19A0A087WUL8 3843 aa8.11□□□□□ -1.11
PTPN7-201ENST00000309017 FAM240AA0A1B0GVK7 77 aa8.11□□□□□ -1.11
PTPN7-201ENST00000309017 NDUFA1O15239 70 aa8.11□□□□□ -1.11
PTPN7-201ENST00000309017 BAALC-AS2P0C853 105 aa8.11□□□□□ -1.11
PTPN7-201ENST00000309017 GAGE2AQ6NT46 116 aa8.11□□□□□ -1.11
PTPN7-201ENST00000309017 C9orf153Q5TBE3 101 aa8.11□□□□□ -1.11
PTPN7-201ENST00000309017 TOMM7Q9P0U1 55 aa8.11□□□□□ -1.11
PTPN7-201ENST00000309017 BAHCC1Q9P281 2608 aa8.1□□□□□ -1.11
PTPN7-201ENST00000309017 B4DSR2 109 aa8.1□□□□□ -1.11
PTPN7-201ENST00000309017 COX7A2LO14548 114 aa8.1□□□□□ -1.11
PTPN7-201ENST00000309017 SLURP1P55000 103 aa8.1□□□□□ -1.11
PTPN7-201ENST00000309017 HERVK_113P63121 156 aa8.1□□□□□ -1.11
PTPN7-201ENST00000309017 CFHR3Q02985 330 aa8.1□□□□□ -1.11
PTPN7-201ENST00000309017 DAZ2Q13117 558 aaKnown RBP8.1□□□□□ -1.11
PTPN7-201ENST00000309017 DAZ4Q86SG3 579 aaKnown RBP8.1□□□□□ -1.11
PTPN7-201ENST00000309017 MAPK1IP1LQ8NDC0 245 aa8.1□□□□□ -1.11
PTPN7-201ENST00000309017 DAZ3Q9NR90 486 aaKnown RBP8.1□□□□□ -1.11
PTPN7-201ENST00000309017 TRGV1A0A0A0MS02 117 aa8.1□□□□□ -1.11
PTPN7-201ENST00000309017 NDUFA7O95182 113 aa8.1□□□□□ -1.11
PTPN7-201ENST00000309017 COX6A2Q02221 97 aa8.1□□□□□ -1.11
PTPN7-201ENST00000309017 FAM104AQ969W3 186 aa8.1□□□□□ -1.11
PTPN7-201ENST00000309017 XCL2Q9UBD3 114 aa8.1□□□□□ -1.11
PTPN7-201ENST00000309017 TIMM17BO60830 172 aa8.09□□□□□ -1.11
PTPN7-201ENST00000309017 UBE2E2Q96LR5 201 aa8.09□□□□□ -1.11
PTPN7-201ENST00000309017 CITED2Q99967 270 aaPredicted RBP8.09□□□□□ -1.11
PTPN7-201ENST00000309017 DNAL4O96015 105 aa8.09□□□□□ -1.11
PTPN7-201ENST00000309017 ACYP1P07311 99 aa8.09□□□□□ -1.11
PTPN7-201ENST00000309017 Q9HAA7 133 aa8.08□□□□□ -1.12
PTPN7-201ENST00000309017 RS1O15537 224 aa8.08□□□□□ -1.12
PTPN7-201ENST00000309017 IGSF10Q6WRI0 2623 aa8.08□□□□□ -1.12
PTPN7-201ENST00000309017 UBE2L6O14933 153 aa8.08□□□□□ -1.12
PTPN7-201ENST00000309017 PIK3CD-AS1Q5SR53 167 aa8.08□□□□□ -1.12
PTPN7-201ENST00000309017 SHISA2Q6UWI4 295 aa8.08□□□□□ -1.12
PTPN7-201ENST00000309017 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.08□□□□□ -1.12
PTPN7-201ENST00000309017 F8P00451 2351 aa8.07□□□□□ -1.12
PTPN7-201ENST00000309017 INSP01308 110 aa8.07□□□□□ -1.12
PTPN7-201ENST00000309017 TIRAPP58753 221 aa8.07□□□□□ -1.12
PTPN7-201ENST00000309017 Q8N2B8 174 aa8.07□□□□□ -1.12
PTPN7-201ENST00000309017 MGAM2Q2M2H8 2515 aa8.07□□□□□ -1.12
PTPN7-201ENST00000309017 CRPP02741 224 aa8.07□□□□□ -1.12
PTPN7-201ENST00000309017 HIST2H2BCQ6DN03 193 aa8.07□□□□□ -1.12
PTPN7-201ENST00000309017 RPL36AP83881 106 aaKnown RBP8.07□□□□□ -1.12
PTPN7-201ENST00000309017 RPL36ALQ969Q0 106 aaKnown RBP8.07□□□□□ -1.12
PTPN7-201ENST00000309017 DNAJC30Q96LL9 226 aa8.07□□□□□ -1.12
PTPN7-201ENST00000309017 LINC00242Q5T6M2 205 aa8.06□□□□□ -1.12
PTPN7-201ENST00000309017 LINC00643Q86TS7 51 aa8.06□□□□□ -1.12
PTPN7-201ENST00000309017 TRBV7-7A0A0K0K1E9 115 aa8.06□□□□□ -1.12
PTPN7-201ENST00000309017 LINC01600Q96MT4 127 aa8.06□□□□□ -1.12
PTPN7-201ENST00000309017 RBMY1BA6NDE4 496 aaKnown RBP8.06□□□□□ -1.12
PTPN7-201ENST00000309017 RBMY1EA6NEQ0 496 aaKnown RBP8.06□□□□□ -1.12
PTPN7-201ENST00000309017 RBMY1DP0C7P1 496 aaKnown RBP8.06□□□□□ -1.12
PTPN7-201ENST00000309017 NRGNQ92686 78 aa8.06□□□□□ -1.12
PTPN7-201ENST00000309017 FAM110AQ9BQ89 295 aa8.06□□□□□ -1.12
PTPN7-201ENST00000309017 C18orf65Q6ZTR6 163 aa8.05□□□□□ -1.12
PTPN7-201ENST00000309017 INAFM2P0DMQ5 153 aa8.05□□□□□ -1.12
PTPN7-201ENST00000309017 LINC00694P0DN24 101 aa8.05□□□□□ -1.12
PTPN7-201ENST00000309017 HIST2H2BDQ6DRA6 164 aa8.05□□□□□ -1.12
PTPN7-201ENST00000309017 LINC00158P58513 81 aa8.05□□□□□ -1.12
PTPN7-201ENST00000309017 SOSTDC1Q6X4U4 206 aa8.05□□□□□ -1.12
PTPN7-201ENST00000309017 TMEM126AQ9H061 195 aa8.05□□□□□ -1.12
PTPN7-201ENST00000309017 DEFB121Q5J5C9 76 aa8.04□□□□□ -1.12
PTPN7-201ENST00000309017 OR13C6PQ8NH95 151 aa8.04□□□□□ -1.12
PTPN7-201ENST00000309017 EDA2RQ9HAV5 297 aa8.04□□□□□ -1.12
PTPN7-201ENST00000309017 SMIM1B2RUZ4 78 aa8.04□□□□□ -1.12
PTPN7-201ENST00000309017 UNC79Q9P2D8 2635 aa8.04□□□□□ -1.12
PTPN7-201ENST00000309017 PEMTQ9UBM1 199 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms