RNA–Protein interactions for RNA: ENST00000308077.9

PTCD2-201, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 1 (best)

Gene PTCD2, Length 2,195 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-201ENST00000308077 OPRPNQ99935 248 aaPredicted RBP4.85□□□□□ -1.63
PTCD2-201ENST00000308077 SACSQ9NZJ4 4579 aa4.85□□□□□ -1.63
PTCD2-201ENST00000308077 TRAV26-1A0A087WT03 109 aa4.85□□□□□ -1.63
PTCD2-201ENST00000308077 PRSS1P07477 247 aa4.85□□□□□ -1.63
PTCD2-201ENST00000308077 G0S2P27469 103 aa4.85□□□□□ -1.63
PTCD2-201ENST00000308077 NANOS2P60321 138 aaKnown RBP4.85□□□□□ -1.63
PTCD2-201ENST00000308077 ANKRD39Q53RE8 183 aa4.85□□□□□ -1.63
PTCD2-201ENST00000308077 ZC2HC1BQ5TFG8 222 aa4.85□□□□□ -1.63
PTCD2-201ENST00000308077 LGALS9CQ6DKI2 356 aa4.85□□□□□ -1.63
PTCD2-201ENST00000308077 CEMP1Q6PRD7 247 aaPredicted RBP4.85□□□□□ -1.63
PTCD2-201ENST00000308077 HERC1Q15751 4861 aa4.84□□□□□ -1.63
PTCD2-201ENST00000308077 TRAV9-2A0A087WT02 112 aa4.84□□□□□ -1.63
PTCD2-201ENST00000308077 A0A096LPF7 62 aa4.84□□□□□ -1.63
PTCD2-201ENST00000308077 LINC01549A6NIU2 74 aa4.84□□□□□ -1.63
PTCD2-201ENST00000308077 TSTD3H0UI37 97 aa4.84□□□□□ -1.63
PTCD2-201ENST00000308077 Q6ZN92 141 aa4.84□□□□□ -1.63
PTCD2-201ENST00000308077 C14orf144Q96I85 54 aa4.84□□□□□ -1.63
PTCD2-201ENST00000308077 GTSF1LQ9H1H1 148 aa4.84□□□□□ -1.63
PTCD2-201ENST00000308077 UBE2D4Q9Y2X8 147 aa4.84□□□□□ -1.63
PTCD2-201ENST00000308077 IGLV4-3A0A075B6K6 122 aa4.84□□□□□ -1.64
PTCD2-201ENST00000308077 TRAV12-1A0A0B4J245 112 aa4.84□□□□□ -1.64
PTCD2-201ENST00000308077 C20orf202A1L168 122 aa4.84□□□□□ -1.64
PTCD2-201ENST00000308077 TCTAP57738 103 aa4.84□□□□□ -1.64
PTCD2-201ENST00000308077 ATP6V0E2Q8NHE4 81 aa4.84□□□□□ -1.64
PTCD2-201ENST00000308077 C11orf45Q8TAV5 145 aa4.84□□□□□ -1.64
PTCD2-201ENST00000308077 TMEM141Q96I45 108 aa4.84□□□□□ -1.64
PTCD2-201ENST00000308077 B9D2Q9BPU9 175 aa4.84□□□□□ -1.64
PTCD2-201ENST00000308077 PYGO1Q9Y3Y4 419 aa4.84□□□□□ -1.64
PTCD2-201ENST00000308077 A0A087WX48 190 aa4.83□□□□□ -1.64
PTCD2-201ENST00000308077 PRSS29PA6NIE9 313 aa4.83□□□□□ -1.64
PTCD2-201ENST00000308077 IGLC3P0DOY3 106 aa4.83□□□□□ -1.64
PTCD2-201ENST00000308077 MRPL35Q9NZE8 188 aaKnown RBP4.83□□□□□ -1.64
PTCD2-201ENST00000308077 TRBV6-8A0A0A6YYG3 113 aa4.82□□□□□ -1.64
PTCD2-201ENST00000308077 RNASE13Q5GAN3 156 aaKnown RBP4.82□□□□□ -1.64
PTCD2-201ENST00000308077 STPG4Q8N801 248 aa4.82□□□□□ -1.64
PTCD2-201ENST00000308077 MIEN1Q9BRT3 115 aa4.82□□□□□ -1.64
PTCD2-201ENST00000308077 SPANXA1Q9NS26 97 aa4.82□□□□□ -1.64
PTCD2-201ENST00000308077 COL7A1Q02388 2944 aa4.82□□□□□ -1.64
PTCD2-201ENST00000308077 TRBV25-1A0A075B6N4 114 aa4.82□□□□□ -1.64
PTCD2-201ENST00000308077 FGF6P10767 208 aa4.82□□□□□ -1.64
PTCD2-201ENST00000308077 PMVKQ15126 192 aa4.82□□□□□ -1.64
PTCD2-201ENST00000308077 Q6ZUT4 128 aa4.82□□□□□ -1.64
PTCD2-201ENST00000308077 TMEM243Q9BU79 118 aa4.82□□□□□ -1.64
PTCD2-201ENST00000308077 CST9LQ9H4G1 147 aa4.82□□□□□ -1.64
PTCD2-201ENST00000308077 CHTOPQ9Y3Y2 248 aaKnown RBP4.82□□□□□ -1.64
PTCD2-201ENST00000308077 IGLV4-69A0A075B6H9 119 aa4.81□□□□□ -1.64
PTCD2-201ENST00000308077 F8VRH5 84 aa4.81□□□□□ -1.64
PTCD2-201ENST00000308077 MRPL52Q86TS9 123 aaKnown RBP4.81□□□□□ -1.64
PTCD2-201ENST00000308077 AMELXQ99217 191 aa4.81□□□□□ -1.64
PTCD2-201ENST00000308077 TIMM21Q9BVV7 248 aa4.81□□□□□ -1.64
PTCD2-201ENST00000308077 ICOSQ9Y6W8 199 aa4.81□□□□□ -1.64
PTCD2-201ENST00000308077 DEFB131BA0A096LNP1 70 aa4.81□□□□□ -1.64
PTCD2-201ENST00000308077 DPM2O94777 84 aa4.81□□□□□ -1.64
PTCD2-201ENST00000308077 IGKCP01834 107 aa4.81□□□□□ -1.64
PTCD2-201ENST00000308077 NPSP0C0P6 89 aa4.81□□□□□ -1.64
PTCD2-201ENST00000308077 GAGE6Q13070 117 aa4.81□□□□□ -1.64
PTCD2-201ENST00000308077 MRPL23Q16540 153 aaKnown RBP4.81□□□□□ -1.64
PTCD2-201ENST00000308077 TMEM97Q5BJF2 176 aa4.81□□□□□ -1.64
PTCD2-201ENST00000308077 H3BNG1 76 aa4.8□□□□□ -1.64
PTCD2-201ENST00000308077 MRPS36P82909 103 aaKnown RBP4.8□□□□□ -1.64
PTCD2-201ENST00000308077 SNHG12Q9BXW3 62 aa4.8□□□□□ -1.64
PTCD2-201ENST00000308077 VCX2Q9H322 139 aa4.8□□□□□ -1.64
PTCD2-201ENST00000308077 IGKV2D-26A0A0A0MRZ7 120 aa4.8□□□□□ -1.64
PTCD2-201ENST00000308077 C11orf86A6NJI1 115 aa4.8□□□□□ -1.64
PTCD2-201ENST00000308077 H7C423 109 aa4.8□□□□□ -1.64
PTCD2-201ENST00000308077 UBE2L6O14933 153 aa4.8□□□□□ -1.64
PTCD2-201ENST00000308077 CTAG1AP78358 180 aa4.8□□□□□ -1.64
PTCD2-201ENST00000308077 CHCHD5Q9BSY4 110 aa4.8□□□□□ -1.64
PTCD2-201ENST00000308077 TTTY13Q9BZ97 58 aa4.8□□□□□ -1.64
PTCD2-201ENST00000308077 CSDC2Q9Y534 153 aaKnown RBP4.8□□□□□ -1.64
PTCD2-201ENST00000308077 IGLV4-60A0A075B6I1 120 aa4.79□□□□□ -1.64
PTCD2-201ENST00000308077 TRAV10A0A0B4J240 114 aa4.79□□□□□ -1.64
PTCD2-201ENST00000308077 PLNP26678 52 aa4.79□□□□□ -1.64
PTCD2-201ENST00000308077 PAPPA-AS1Q5QFB9 102 aa4.79□□□□□ -1.64
PTCD2-201ENST00000308077 DGAT2L7PQ6IED9 249 aa4.79□□□□□ -1.64
PTCD2-201ENST00000308077 CDC42SE2Q9NRR3 84 aa4.79□□□□□ -1.64
PTCD2-201ENST00000308077 UQCR10Q9UDW1 63 aa4.79□□□□□ -1.64
PTCD2-201ENST00000308077 A0A0J9YXV3 536 aa4.78□□□□□ -1.64
PTCD2-201ENST00000308077 AMMECR1LQ6DCA0 310 aa4.78□□□□□ -1.64
PTCD2-201ENST00000308077 SH2D6Q7Z4S9 175 aa4.78□□□□□ -1.64
PTCD2-201ENST00000308077 OR5A1Q8NGJ0 315 aa4.78□□□□□ -1.64
PTCD2-201ENST00000308077 HSBP1L1C9JCN9 74 aa4.78□□□□□ -1.64
PTCD2-201ENST00000308077 ZNF25P17030 456 aaPredicted RBP4.78□□□□□ -1.64
PTCD2-201ENST00000308077 UBE2D1P51668 147 aa4.78□□□□□ -1.64
PTCD2-201ENST00000308077 MPV17L2Q567V2 206 aa4.78□□□□□ -1.64
PTCD2-201ENST00000308077 LELP1Q5T871 98 aa4.78□□□□□ -1.64
PTCD2-201ENST00000308077 LYPD5Q6UWN5 251 aa4.78□□□□□ -1.64
PTCD2-201ENST00000308077 NFE4Q86UQ8 179 aa4.78□□□□□ -1.64
PTCD2-201ENST00000308077 PCP2Q8IVA1 136 aa4.78□□□□□ -1.64
PTCD2-201ENST00000308077 Q8N3U1 123 aa4.78□□□□□ -1.64
PTCD2-201ENST00000308077 NHLRC4P0CG21 123 aaPredicted RBP4.77□□□□□ -1.65
PTCD2-201ENST00000308077 TMEM101Q96IK0 257 aa4.77□□□□□ -1.65
PTCD2-201ENST00000308077 CHAC1Q9BUX1 264 aa4.77□□□□□ -1.65
PTCD2-201ENST00000308077 TMEM262E9PQX1 116 aa4.77□□□□□ -1.65
PTCD2-201ENST00000308077 COX8AP10176 69 aa4.77□□□□□ -1.65
PTCD2-201ENST00000308077 ZNF22P17026 224 aaPredicted RBP4.77□□□□□ -1.65
PTCD2-201ENST00000308077 HNRNPA3P51991 378 aaKnown RBP4.77□□□□□ -1.65
PTCD2-201ENST00000308077 TIRAPP58753 221 aa4.77□□□□□ -1.65
PTCD2-201ENST00000308077 RBX1P62877 108 aa4.77□□□□□ -1.65
PTCD2-201ENST00000308077 SMAGPQ0VAQ4 97 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms