RNA–Protein interactions for RNA: ENST00000306256.13

RER1-201, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 5

Gene RER1, Length 695 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-201ENST00000306256 SMIM7Q9BQ49 75 aa12.88□□□□□ -0.35
RER1-201ENST00000306256 A0A1B0GUT8 65 aa12.87□□□□□ -0.35
RER1-201ENST00000306256 hCG_2014768A0A024R1R8 64 aa12.86□□□□□ -0.35
RER1-201ENST00000306256 PRR3P79522 188 aaKnown RBP12.86□□□□□ -0.35
RER1-201ENST00000306256 LINC01551Q86U37 167 aa12.86□□□□□ -0.35
RER1-201ENST00000306256 TSKUQ8WUA8 353 aa12.86□□□□□ -0.35
RER1-201ENST00000306256 TMEM191AQ9H0A3 160 aa12.86□□□□□ -0.35
RER1-201ENST00000306256 IGHV1-58A0A0C4DH39 117 aa12.85□□□□□ -0.35
RER1-201ENST00000306256 POLR2KP53803 58 aaKnown RBP12.85□□□□□ -0.35
RER1-201ENST00000306256 AMN1Q8IY45 258 aa12.85□□□□□ -0.35
RER1-201ENST00000306256 EIF5A2Q9GZV4 153 aaKnown RBP12.85□□□□□ -0.35
RER1-201ENST00000306256 UBR4Q5T4S7 5183 aa12.85□□□□□ -0.35
RER1-201ENST00000306256 SMKR1H3BMG3 65 aa12.84□□□□□ -0.35
RER1-201ENST00000306256 RAB4AP20338 218 aa12.84□□□□□ -0.35
RER1-201ENST00000306256 CARD19Q96LW7 228 aa12.84□□□□□ -0.35
RER1-201ENST00000306256 CDC42SE2Q9NRR3 84 aa12.84□□□□□ -0.35
RER1-201ENST00000306256 TRBV27A0A0K0K1C4 114 aa12.83□□□□□ -0.36
RER1-201ENST00000306256 C7orf77A4D0Y5 90 aa12.83□□□□□ -0.36
RER1-201ENST00000306256 SS18Q15532 418 aa12.83□□□□□ -0.36
RER1-201ENST00000306256 MRPL52Q86TS9 123 aaKnown RBP12.83□□□□□ -0.36
RER1-201ENST00000306256 ZNF727A8MUV8 499 aa12.82□□□□□ -0.36
RER1-201ENST00000306256 ZNF664Q8N3J9 261 aa12.82□□□□□ -0.36
RER1-201ENST00000306256 OSTCQ9NRP0 149 aa12.82□□□□□ -0.36
RER1-201ENST00000306256 CD164L2Q6UWJ8 174 aa12.81□□□□□ -0.36
RER1-201ENST00000306256 SRP19P09132 144 aaKnown RBP12.8□□□□□ -0.36
RER1-201ENST00000306256 SYCNQ0VAF6 134 aa12.8□□□□□ -0.36
RER1-201ENST00000306256 FAM210AQ96ND0 272 aa12.8□□□□□ -0.36
RER1-201ENST00000306256 V9GYV3 84 aa12.8□□□□□ -0.36
RER1-201ENST00000306256 TNXBP22105 4242 aa12.8□□□□□ -0.36
RER1-201ENST00000306256 ZNF561-AS1K7EIQ3 104 aa12.79□□□□□ -0.36
RER1-201ENST00000306256 FCER1GP30273 86 aa12.79□□□□□ -0.36
RER1-201ENST00000306256 RNASE13Q5GAN3 156 aaKnown RBP12.79□□□□□ -0.36
RER1-201ENST00000306256 LINC00474Q9P2X8 69 aa12.79□□□□□ -0.36
RER1-201ENST00000306256 PKIGQ9Y2B9 76 aa12.79□□□□□ -0.36
RER1-201ENST00000306256 RIGQ13278 110 aa12.78□□□□□ -0.36
RER1-201ENST00000306256 ODF1Q14990 250 aa12.78□□□□□ -0.36
RER1-201ENST00000306256 NRACQ8N912 160 aa12.78□□□□□ -0.36
RER1-201ENST00000306256 NUP35Q8NFH5 326 aa12.78□□□□□ -0.36
RER1-201ENST00000306256 VCYO14598 125 aa12.77□□□□□ -0.37
RER1-201ENST00000306256 CAMPP49913 170 aa12.77□□□□□ -0.37
RER1-201ENST00000306256 LINC01600Q96MT4 127 aa12.77□□□□□ -0.37
RER1-201ENST00000306256 SUMO2P61956 95 aaKnown RBP12.76□□□□□ -0.37
RER1-201ENST00000306256 IGLV4-69A0A075B6H9 119 aa12.75□□□□□ -0.37
RER1-201ENST00000306256 MALP21145 153 aa12.75□□□□□ -0.37
RER1-201ENST00000306256 ISOC2Q96AB3 205 aa12.75□□□□□ -0.37
RER1-201ENST00000306256 UBE2D4Q9Y2X8 147 aa12.75□□□□□ -0.37
RER1-201ENST00000306256 TRAV13-1A0A0B4J241 112 aa12.74□□□□□ -0.37
RER1-201ENST00000306256 C1orf196B1AJZ1 125 aa12.74□□□□□ -0.37
RER1-201ENST00000306256 COX7A2LO14548 114 aa12.74□□□□□ -0.37
RER1-201ENST00000306256 PTTG1IPP53801 180 aa12.74□□□□□ -0.37
RER1-201ENST00000306256 GAGE2BQ13066 116 aa12.74□□□□□ -0.37
RER1-201ENST00000306256 Q6ZUT4 128 aa12.74□□□□□ -0.37
RER1-201ENST00000306256 KIR2DL4Q99706 377 aa12.73□□□□□ -0.37
RER1-201ENST00000306256 LOC107984640A0A0U1RRK4 108 aa12.72□□□□□ -0.37
RER1-201ENST00000306256 PPP1R17O96001 155 aa12.72□□□□□ -0.37
RER1-201ENST00000306256 RPL23P62829 140 aaKnown RBP12.72□□□□□ -0.37
RER1-201ENST00000306256 MRPL51Q4U2R6 128 aaKnown RBP12.72□□□□□ -0.37
RER1-201ENST00000306256 SPINK6Q6UWN8 80 aa12.72□□□□□ -0.37
RER1-201ENST00000306256 NAT8BQ9UHF3 227 aa12.72□□□□□ -0.37
RER1-201ENST00000306256 CSDC2Q9Y534 153 aaKnown RBP12.72□□□□□ -0.37
RER1-201ENST00000306256 ADIRFQ15847 76 aa12.71□□□□□ -0.37
RER1-201ENST00000306256 TMEM241Q24JQ0 296 aa12.71□□□□□ -0.37
RER1-201ENST00000306256 FAM104BQ5XKR9 115 aa12.71□□□□□ -0.37
RER1-201ENST00000306256 Q6ZRP5 223 aa12.71□□□□□ -0.37
RER1-201ENST00000306256 C5orf38Q86SI9 138 aa12.71□□□□□ -0.37
RER1-201ENST00000306256 CAMK2N2Q96S95 79 aa12.71□□□□□ -0.37
RER1-201ENST00000306256 A0A0J9YXV3 536 aa12.7□□□□□ -0.38
RER1-201ENST00000306256 SMAGPQ0VAQ4 97 aa12.7□□□□□ -0.38
RER1-201ENST00000306256 C9JQL5 133 aa12.69□□□□□ -0.38
RER1-201ENST00000306256 PPP1R2P9O14990 202 aa12.69□□□□□ -0.38
RER1-201ENST00000306256 A0A1W2PNN7 141 aa12.68□□□□□ -0.38
RER1-201ENST00000306256 SRSF9Q13242 221 aaKnown RBP eCLIP12.68□□□□□ -0.382e-6■□□□□ 8.7
RER1-201ENST00000306256 FAM74A3Q4VXF1 159 aa12.68□□□□□ -0.38
RER1-201ENST00000306256 REG3GQ6UW15 175 aa12.68□□□□□ -0.38
RER1-201ENST00000306256 SMIM27A0A1W2PRY6 76 aa12.67□□□□□ -0.38
RER1-201ENST00000306256 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.67□□□□□ -0.38
RER1-201ENST00000306256 APOMO95445 188 aa12.67□□□□□ -0.38
RER1-201ENST00000306256 RPL39P62891 51 aaKnown RBP12.67□□□□□ -0.38
RER1-201ENST00000306256 TIMM21Q9BVV7 248 aa12.67□□□□□ -0.38
RER1-201ENST00000306256 NAT8Q9UHE5 227 aa12.67□□□□□ -0.38
RER1-201ENST00000306256 RPL18AQ02543 176 aaKnown RBP12.66□□□□□ -0.38
RER1-201ENST00000306256 SPAG11BQ08648 103 aa12.66□□□□□ -0.38
RER1-201ENST00000306256 TMEM18Q96B42 140 aa12.66□□□□□ -0.38
RER1-201ENST00000306256 C2orf48Q96LS8 159 aa12.66□□□□□ -0.38
RER1-201ENST00000306256 CKS2P33552 79 aa12.65□□□□□ -0.38
RER1-201ENST00000306256 KRTAP10-8P60410 259 aa12.65□□□□□ -0.38
RER1-201ENST00000306256 C9orf116Q5BN46 136 aaPredicted RBP12.65□□□□□ -0.38
RER1-201ENST00000306256 OPRPNQ99935 248 aaPredicted RBP12.65□□□□□ -0.38
RER1-201ENST00000306256 C20orf78Q9BR46 151 aa12.65□□□□□ -0.38
RER1-201ENST00000306256 LRP2P98164 4655 aa12.65□□□□□ -0.38
RER1-201ENST00000306256 TNFRSF6BO95407 300 aa12.64□□□□□ -0.39
RER1-201ENST00000306256 SRSF3P84103 164 aaKnown RBP12.64□□□□□ -0.39
RER1-201ENST00000306256 FAM104AQ969W3 186 aa12.64□□□□□ -0.39
RER1-201ENST00000306256 TRBV24-1A0A075B6N3 115 aa12.63□□□□□ -0.39
RER1-201ENST00000306256 LINC00862A6NCI5 91 aa12.63□□□□□ -0.39
RER1-201ENST00000306256 RPL32P62910 135 aaKnown RBP12.63□□□□□ -0.39
RER1-201ENST00000306256 MRPL54Q6P161 138 aaKnown RBP12.63□□□□□ -0.39
RER1-201ENST00000306256 SMIM2Q9BVW6 85 aa12.63□□□□□ -0.39
RER1-201ENST00000306256 A0A1B0GW15 77 aa12.62□□□□□ -0.39
RER1-201ENST00000306256 D6R8Y8 96 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 102.8 ms