RNA–Protein interactions for RNA: ENST00000304672.5

PTCRA-201, Transcript of pre T cell antigen receptor alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTCRA, Length 1,080 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCRA-201ENST00000304672 IGHV3-64A0A075B6Q5 118 aa11.86□□□□□ -0.51
PTCRA-201ENST00000304672 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.86□□□□□ -0.51
PTCRA-201ENST00000304672 A0A1B0GXF2 115 aa11.86□□□□□ -0.51
PTCRA-201ENST00000304672 IGKV2-29A2NJV5 120 aaPredicted RBP11.86□□□□□ -0.51
PTCRA-201ENST00000304672 HBBP68871 147 aa11.86□□□□□ -0.51
PTCRA-201ENST00000304672 REG3AQ06141 175 aa11.86□□□□□ -0.51
PTCRA-201ENST00000304672 MRPL51Q4U2R6 128 aaKnown RBP11.86□□□□□ -0.51
PTCRA-201ENST00000304672 I3L3M4 83 aa11.85□□□□□ -0.51
PTCRA-201ENST00000304672 PHOX2AO14813 284 aa11.85□□□□□ -0.51
PTCRA-201ENST00000304672 PPP1R2P9O14990 202 aa11.85□□□□□ -0.51
PTCRA-201ENST00000304672 TSHBP01222 138 aa11.85□□□□□ -0.51
PTCRA-201ENST00000304672 PMCHP20382 165 aa11.85□□□□□ -0.51
PTCRA-201ENST00000304672 FAM104BQ5XKR9 115 aa11.85□□□□□ -0.51
PTCRA-201ENST00000304672 NRACQ8N912 160 aa11.85□□□□□ -0.51
PTCRA-201ENST00000304672 A0A1B0GW15 77 aa11.84□□□□□ -0.51
PTCRA-201ENST00000304672 UQCC3Q6UW78 93 aa11.84□□□□□ -0.51
PTCRA-201ENST00000304672 A0A1B0GUV1 79 aa11.83□□□□□ -0.52
PTCRA-201ENST00000304672 COMMD7Q86VX2 200 aa11.83□□□□□ -0.52
PTCRA-201ENST00000304672 PLAC8Q9NZF1 115 aa11.83□□□□□ -0.52
PTCRA-201ENST00000304672 MT-ND4LP03901 98 aa11.82□□□□□ -0.52
PTCRA-201ENST00000304672 POLR2KP53803 58 aaKnown RBP11.82□□□□□ -0.52
PTCRA-201ENST00000304672 ANAPC16Q96DE5 110 aa11.82□□□□□ -0.52
PTCRA-201ENST00000304672 LINC01600Q96MT4 127 aa11.82□□□□□ -0.52
PTCRA-201ENST00000304672 AP5S1Q9NUS5 200 aa11.82□□□□□ -0.52
PTCRA-201ENST00000304672 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.81□□□□□ -0.52
PTCRA-201ENST00000304672 TMEM218A2RU14 115 aa11.81□□□□□ -0.52
PTCRA-201ENST00000304672 AMMECR1LQ6DCA0 310 aa11.81□□□□□ -0.52
PTCRA-201ENST00000304672 RNASEKQ6P5S7 137 aaKnown RBP11.81□□□□□ -0.52
PTCRA-201ENST00000304672 TRAV8-4A0A0B4J246 113 aa11.8□□□□□ -0.52
PTCRA-201ENST00000304672 TRBV27A0A0K0K1C4 114 aa11.8□□□□□ -0.52
PTCRA-201ENST00000304672 F8W036 122 aa11.8□□□□□ -0.52
PTCRA-201ENST00000304672 S100A8P05109 93 aa11.8□□□□□ -0.52
PTCRA-201ENST00000304672 FGF6P10767 208 aa11.8□□□□□ -0.52
PTCRA-201ENST00000304672 SUMO2P61956 95 aaKnown RBP11.8□□□□□ -0.52
PTCRA-201ENST00000304672 ATP5L2Q7Z4Y8 100 aa11.8□□□□□ -0.52
PTCRA-201ENST00000304672 C7orf33Q8WU49 177 aa11.8□□□□□ -0.52
PTCRA-201ENST00000304672 IGKV3OR2-268A0A0C4DH90 116 aa11.79□□□□□ -0.52
PTCRA-201ENST00000304672 D6R8Y8 96 aa11.79□□□□□ -0.52
PTCRA-201ENST00000304672 ESDP10768 282 aa11.79□□□□□ -0.52
PTCRA-201ENST00000304672 CKS2P33552 79 aa11.79□□□□□ -0.52
PTCRA-201ENST00000304672 H7C423 109 aa11.78□□□□□ -0.52
PTCRA-201ENST00000304672 PPP1R17O96001 155 aa11.78□□□□□ -0.52
PTCRA-201ENST00000304672 FCER1GP30273 86 aa11.77□□□□□ -0.53
PTCRA-201ENST00000304672 PRR3P79522 188 aaKnown RBP11.77□□□□□ -0.53
PTCRA-201ENST00000304672 COX6A2Q02221 97 aa11.77□□□□□ -0.53
PTCRA-201ENST00000304672 C7orf77A4D0Y5 90 aa11.76□□□□□ -0.53
PTCRA-201ENST00000304672 LINC00862A6NCI5 91 aa11.76□□□□□ -0.53
PTCRA-201ENST00000304672 VCYO14598 125 aa11.76□□□□□ -0.53
PTCRA-201ENST00000304672 TNFRSF6BO95407 300 aa11.76□□□□□ -0.53
PTCRA-201ENST00000304672 NPYP01303 97 aa11.76□□□□□ -0.53
PTCRA-201ENST00000304672 C15orf56Q8N910 161 aa11.76□□□□□ -0.53
PTCRA-201ENST00000304672 KIR2DL4Q99706 377 aa11.75□□□□□ -0.53
PTCRA-201ENST00000304672 SEC11CQ9BY50 192 aa11.75□□□□□ -0.53
PTCRA-201ENST00000304672 TRBV24-1A0A075B6N3 115 aa11.74□□□□□ -0.53
PTCRA-201ENST00000304672 A0A0J9YXV3 536 aa11.74□□□□□ -0.53
PTCRA-201ENST00000304672 ZNF25P17030 456 aaPredicted RBP11.74□□□□□ -0.53
PTCRA-201ENST00000304672 MAJINQ3KP22 176 aa11.74□□□□□ -0.53
PTCRA-201ENST00000304672 PRSS3P2Q8NHM4 247 aa11.74□□□□□ -0.53
PTCRA-201ENST00000304672 C20orf78Q9BR46 151 aa11.74□□□□□ -0.53
PTCRA-201ENST00000304672 SMIM2Q9BVW6 85 aa11.74□□□□□ -0.53
PTCRA-201ENST00000304672 IGKV2-24A0A0C4DH68 120 aa11.73□□□□□ -0.53
PTCRA-201ENST00000304672 KRTAP10-8P60410 259 aa11.73□□□□□ -0.53
PTCRA-201ENST00000304672 OR5A1Q8NGJ0 315 aa11.73□□□□□ -0.53
PTCRA-201ENST00000304672 TMEM101Q96IK0 257 aa11.73□□□□□ -0.53
PTCRA-201ENST00000304672 BTF3L4Q96K17 158 aa11.73□□□□□ -0.53
PTCRA-201ENST00000304672 GAGE12HA6NDE8 117 aa11.72□□□□□ -0.53
PTCRA-201ENST00000304672 RPL32P62910 135 aaKnown RBP11.72□□□□□ -0.53
PTCRA-201ENST00000304672 HIGD2BQ4VC39 106 aa11.72□□□□□ -0.53
PTCRA-201ENST00000304672 MRPL52Q86TS9 123 aaKnown RBP11.72□□□□□ -0.53
PTCRA-201ENST00000304672 ORMDL3Q8N138 153 aa11.72□□□□□ -0.53
PTCRA-201ENST00000304672 PPBPP02775 128 aa11.71□□□□□ -0.53
PTCRA-201ENST00000304672 TMEM136Q6ZRR5 245 aa11.71□□□□□ -0.53
PTCRA-201ENST00000304672 STPG4Q8N801 248 aa11.71□□□□□ -0.53
PTCRA-201ENST00000304672 CHCHD10Q8WYQ3 142 aaPredicted RBP11.71□□□□□ -0.53
PTCRA-201ENST00000304672 PRELID3AQ96N28 172 aa11.71□□□□□ -0.53
PTCRA-201ENST00000304672 UBE2D4Q9Y2X8 147 aa11.7□□□□□ -0.54
PTCRA-201ENST00000304672 LPAP08519 4548 aa11.69□□□□□ -0.54
PTCRA-201ENST00000304672 TCAPO15273 167 aa11.69□□□□□ -0.54
PTCRA-201ENST00000304672 RNASE13Q5GAN3 156 aaKnown RBP11.69□□□□□ -0.54
PTCRA-201ENST00000304672 C10orf91Q5T1B1 145 aa11.69□□□□□ -0.54
PTCRA-201ENST00000304672 IMMP2LQ96T52 175 aa11.69□□□□□ -0.54
PTCRA-201ENST00000304672 CTDSP1Q9GZU7 261 aa11.69□□□□□ -0.54
PTCRA-201ENST00000304672 CDC42SE2Q9NRR3 84 aa11.69□□□□□ -0.54
PTCRA-201ENST00000304672 A0A096LNI7 61 aa11.68□□□□□ -0.54
PTCRA-201ENST00000304672 CFAP161Q6P656 301 aa11.68□□□□□ -0.54
PTCRA-201ENST00000304672 SPINK6Q6UWN8 80 aa11.68□□□□□ -0.54
PTCRA-201ENST00000304672 Q6ZUT4 128 aa11.68□□□□□ -0.54
PTCRA-201ENST00000304672 CARHSP1Q9Y2V2 147 aaKnown RBP11.68□□□□□ -0.54
PTCRA-201ENST00000304672 XCL1P47992 114 aa11.67□□□□□ -0.54
PTCRA-201ENST00000304672 RPL39P62891 51 aaKnown RBP11.67□□□□□ -0.54
PTCRA-201ENST00000304672 ZNF664Q8N3J9 261 aa11.67□□□□□ -0.54
PTCRA-201ENST00000304672 LINC00959A0A1B0GUT2 108 aa11.66□□□□□ -0.54
PTCRA-201ENST00000304672 CCL25O15444 150 aa11.66□□□□□ -0.54
PTCRA-201ENST00000304672 FOXI1Q12951 378 aa11.66□□□□□ -0.54
PTCRA-201ENST00000304672 REG3GQ6UW15 175 aa11.66□□□□□ -0.54
PTCRA-201ENST00000304672 GVQW2A0A096LPI5 108 aaPredicted RBP11.65□□□□□ -0.54
PTCRA-201ENST00000304672 LOC389332A0A1B0GUA5 103 aa11.65□□□□□ -0.54
PTCRA-201ENST00000304672 SRSF9Q13242 221 aaKnown RBP eCLIP11.64□□□□□ -0.55
PTCRA-201ENST00000304672 RHEBQ15382 184 aa11.64□□□□□ -0.55
PTCRA-201ENST00000304672 TMEM18Q96B42 140 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms