RNA–Protein interactions for RNA: ENST00000304494.9

CDKN2A-201, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 1,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-201ENST00000304494 MRPL52Q86TS9 123 aaKnown RBP17.06■□□□□ 0.32
CDKN2A-201ENST00000304494 KIR2DL4Q99706 377 aa17.06■□□□□ 0.32
CDKN2A-201ENST00000304494 F8W036 122 aa17.05■□□□□ 0.32
CDKN2A-201ENST00000304494 HBBP68871 147 aa17.05■□□□□ 0.32
CDKN2A-201ENST00000304494 SMAGPQ0VAQ4 97 aa17.04■□□□□ 0.32
CDKN2A-201ENST00000304494 CKS2P33552 79 aa17.03■□□□□ 0.32
CDKN2A-201ENST00000304494 MRPL54Q6P161 138 aaKnown RBP17.03■□□□□ 0.32
CDKN2A-201ENST00000304494 C15orf56Q8N910 161 aa17.03■□□□□ 0.32
CDKN2A-201ENST00000304494 C20orf78Q9BR46 151 aa17.03■□□□□ 0.32
CDKN2A-201ENST00000304494 SDIM1Q6ZPB5 146 aa17.02■□□□□ 0.32
CDKN2A-201ENST00000304494 CDC42SE2Q9NRR3 84 aa17.02■□□□□ 0.32
CDKN2A-201ENST00000304494 TRBV24-1A0A075B6N3 115 aa17.01■□□□□ 0.31
CDKN2A-201ENST00000304494 IGHV3-64A0A075B6Q5 118 aa17.01■□□□□ 0.31
CDKN2A-201ENST00000304494 LINC00959A0A1B0GUT2 108 aa17.01■□□□□ 0.31
CDKN2A-201ENST00000304494 PNRC1Q12796 327 aaPredicted RBP17.01■□□□□ 0.31
CDKN2A-201ENST00000304494 ZNF664Q8N3J9 261 aa17.01■□□□□ 0.31
CDKN2A-201ENST00000304494 A0A1B0GXF2 115 aa17■□□□□ 0.31
CDKN2A-201ENST00000304494 FOXI1Q12951 378 aa17■□□□□ 0.31
CDKN2A-201ENST00000304494 XCL1P47992 114 aa16.99■□□□□ 0.31
CDKN2A-201ENST00000304494 SS18Q15532 418 aa16.99■□□□□ 0.31
CDKN2A-201ENST00000304494 ATP5L2Q7Z4Y8 100 aa16.99■□□□□ 0.31
CDKN2A-201ENST00000304494 MYCBP2O75592 4640 aa16.99■□□□□ 0.31
CDKN2A-201ENST00000304494 TCAPO15273 167 aa16.98■□□□□ 0.31
CDKN2A-201ENST00000304494 CCL25O15444 150 aa16.98■□□□□ 0.31
CDKN2A-201ENST00000304494 SLPIP03973 132 aa16.98■□□□□ 0.31
CDKN2A-201ENST00000304494 RPL32P62910 135 aaKnown RBP16.98■□□□□ 0.31
CDKN2A-201ENST00000304494 TMEM18Q96B42 140 aa16.98■□□□□ 0.31
CDKN2A-201ENST00000304494 CSDC2Q9Y534 153 aaKnown RBP16.98■□□□□ 0.31
CDKN2A-201ENST00000304494 TNFRSF6BO95407 300 aa16.97■□□□□ 0.31
CDKN2A-201ENST00000304494 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP16.97■□□□□ 0.31
CDKN2A-201ENST00000304494 D6R8Y8 96 aa16.96■□□□□ 0.31
CDKN2A-201ENST00000304494 PPBPP02775 128 aa16.96■□□□□ 0.31
CDKN2A-201ENST00000304494 HIGD2BQ4VC39 106 aa16.96■□□□□ 0.31
CDKN2A-201ENST00000304494 UBE2D4Q9Y2X8 147 aa16.96■□□□□ 0.31
CDKN2A-201ENST00000304494 GVQW2A0A096LPI5 108 aaPredicted RBP16.95■□□□□ 0.3
CDKN2A-201ENST00000304494 PHOX2AO14813 284 aa16.94■□□□□ 0.3
CDKN2A-201ENST00000304494 MT-ND4LP03901 98 aa16.94■□□□□ 0.3
CDKN2A-201ENST00000304494 CLLU1Q5K131 121 aa16.94■□□□□ 0.3
CDKN2A-201ENST00000304494 ANAPC16Q96DE5 110 aa16.94■□□□□ 0.3
CDKN2A-201ENST00000304494 CIRBPQ14011 172 aaKnown RBP16.93■□□□□ 0.3
CDKN2A-201ENST00000304494 CD164L2Q6UWJ8 174 aa16.93■□□□□ 0.3
CDKN2A-201ENST00000304494 SMIM2Q9BVW6 85 aa16.93■□□□□ 0.3
CDKN2A-201ENST00000304494 IGHV1-58A0A0C4DH39 117 aa16.92■□□□□ 0.3
CDKN2A-201ENST00000304494 PANO1I0J062 215 aa16.92■□□□□ 0.3
CDKN2A-201ENST00000304494 TIMM21Q9BVV7 248 aa16.92■□□□□ 0.3
CDKN2A-201ENST00000304494 C1orf196B1AJZ1 125 aa16.91■□□□□ 0.3
CDKN2A-201ENST00000304494 ORMDL3Q8N138 153 aa16.91■□□□□ 0.3
CDKN2A-201ENST00000304494 NPYP01303 97 aa16.9■□□□□ 0.3
CDKN2A-201ENST00000304494 DPH3Q96FX2 82 aa16.9■□□□□ 0.3
CDKN2A-201ENST00000304494 HERC1Q15751 4861 aa16.9■□□□□ 0.3
CDKN2A-201ENST00000304494 KRTAP10-4P60372 401 aaPredicted RBP16.88■□□□□ 0.29
CDKN2A-201ENST00000304494 TMEM136Q6ZRR5 245 aa16.88■□□□□ 0.29
CDKN2A-201ENST00000304494 RPL37AP61513 92 aaKnown RBP16.87■□□□□ 0.29
CDKN2A-201ENST00000304494 SPACA4Q8TDM5 124 aa16.87■□□□□ 0.29
CDKN2A-201ENST00000304494 FLG2Q5D862 2391 aaPredicted RBP16.87■□□□□ 0.29
CDKN2A-201ENST00000304494 RNASE13Q5GAN3 156 aaKnown RBP16.86■□□□□ 0.29
CDKN2A-201ENST00000304494 Q6ZUT4 128 aa16.86■□□□□ 0.29
CDKN2A-201ENST00000304494 PRELID3AQ96N28 172 aa16.86■□□□□ 0.29
CDKN2A-201ENST00000304494 TRAV13-1A0A0B4J241 112 aa16.85■□□□□ 0.29
CDKN2A-201ENST00000304494 COX6A2Q02221 97 aa16.85■□□□□ 0.29
CDKN2A-201ENST00000304494 SPANXA1Q9NS26 97 aa16.85■□□□□ 0.29
CDKN2A-201ENST00000304494 CHTF8P0CG12 524 aa16.84■□□□□ 0.29
CDKN2A-201ENST00000304494 MALP21145 153 aa16.84■□□□□ 0.29
CDKN2A-201ENST00000304494 RPL39P62891 51 aaKnown RBP16.84■□□□□ 0.29
CDKN2A-201ENST00000304494 UQCC3Q6UW78 93 aa16.84■□□□□ 0.29
CDKN2A-201ENST00000304494 PKIGQ9Y2B9 76 aa16.84■□□□□ 0.29
CDKN2A-201ENST00000304494 LAMTOR2Q9Y2Q5 125 aa16.84■□□□□ 0.29
CDKN2A-201ENST00000304494 DMBT1Q9UGM3 2413 aaPredicted RBP16.84■□□□□ 0.29
CDKN2A-201ENST00000304494 ZNF561-AS1K7EIQ3 104 aa16.83■□□□□ 0.28
CDKN2A-201ENST00000304494 COX7A2LO14548 114 aa16.83■□□□□ 0.28
CDKN2A-201ENST00000304494 RAB5AP20339 215 aa16.83■□□□□ 0.28
CDKN2A-201ENST00000304494 A0A087WYN8 130 aa16.82■□□□□ 0.28
CDKN2A-201ENST00000304494 J3QL48 77 aa16.81■□□□□ 0.28
CDKN2A-201ENST00000304494 PRSS3P2Q8NHM4 247 aa16.81■□□□□ 0.28
CDKN2A-201ENST00000304494 CARD19Q96LW7 228 aa16.81■□□□□ 0.28
CDKN2A-201ENST00000304494 PRSS47A8MTI9 375 aa16.79■□□□□ 0.28
CDKN2A-201ENST00000304494 MRPS36P82909 103 aaKnown RBP16.79■□□□□ 0.28
CDKN2A-201ENST00000304494 IFITM2Q01629 132 aa16.79■□□□□ 0.28
CDKN2A-201ENST00000304494 LINC00526Q96FQ7 95 aa16.79■□□□□ 0.28
CDKN2A-201ENST00000304494 IMMP2LQ96T52 175 aa16.79■□□□□ 0.28
CDKN2A-201ENST00000304494 MAP1LC3AQ9H492 121 aa16.79■□□□□ 0.28
CDKN2A-201ENST00000304494 PLAC8Q9NZF1 115 aa16.79■□□□□ 0.28
CDKN2A-201ENST00000304494 KRTAP29-1A8MX34 341 aaPredicted RBP16.78■□□□□ 0.28
CDKN2A-201ENST00000304494 IGKV2-24A0A0C4DH68 120 aa16.77■□□□□ 0.28
CDKN2A-201ENST00000304494 TMEM218A2RU14 115 aa16.77■□□□□ 0.28
CDKN2A-201ENST00000304494 SYCNQ0VAF6 134 aa16.77■□□□□ 0.28
CDKN2A-201ENST00000304494 MAJINQ3KP22 176 aa16.77■□□□□ 0.28
CDKN2A-201ENST00000304494 LINC00474Q9P2X8 69 aa16.77■□□□□ 0.28
CDKN2A-201ENST00000304494 APOMO95445 188 aa16.76■□□□□ 0.27
CDKN2A-201ENST00000304494 IFI27P40305 119 aaPredicted RBP16.76■□□□□ 0.27
CDKN2A-201ENST00000304494 ADCYAP1P18509 176 aa16.75■□□□□ 0.27
CDKN2A-201ENST00000304494 FAM104AQ969W3 186 aa16.75■□□□□ 0.27
CDKN2A-201ENST00000304494 IGLV4-69A0A075B6H9 119 aa16.74■□□□□ 0.27
CDKN2A-201ENST00000304494 LOC389332A0A1B0GUA5 103 aa16.74■□□□□ 0.27
CDKN2A-201ENST00000304494 C5orf38Q86SI9 138 aa16.74■□□□□ 0.27
CDKN2A-201ENST00000304494 CTDSP1Q9GZU7 261 aa16.74■□□□□ 0.27
CDKN2A-201ENST00000304494 A0A096LNI7 61 aa16.73■□□□□ 0.27
CDKN2A-201ENST00000304494 IFITM10A6NMD0 228 aa16.73■□□□□ 0.27
CDKN2A-201ENST00000304494 OPRPNQ99935 248 aaPredicted RBP16.73■□□□□ 0.27
CDKN2A-201ENST00000304494 PYGO1Q9Y3Y4 419 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms