RNA–Protein interactions for RNA: ENST00000298396.6

SSX3-201, Transcript of SSX family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX3, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-201ENST00000298396 IGHV3-30P01768 117 aa3.96□□□□□ -1.78
SSX3-201ENST00000298396 IGHV3-33P01772 117 aa3.96□□□□□ -1.78
SSX3-201ENST00000298396 PPBPP02775 128 aa3.96□□□□□ -1.78
SSX3-201ENST00000298396 MT-ND6P03923 174 aa3.96□□□□□ -1.78
SSX3-201ENST00000298396 IGHV3-30-3P0DP02 117 aa3.96□□□□□ -1.78
SSX3-201ENST00000298396 IGHV3-30-5P0DP03 117 aa3.96□□□□□ -1.78
SSX3-201ENST00000298396 FABP9Q0Z7S8 132 aa3.96□□□□□ -1.78
SSX3-201ENST00000298396 GAGE6Q13070 117 aa3.96□□□□□ -1.78
SSX3-201ENST00000298396 COTL1Q14019 142 aa3.96□□□□□ -1.78
SSX3-201ENST00000298396 Q6ZRN7 208 aaPredicted RBP3.96□□□□□ -1.78
SSX3-201ENST00000298396 FAM104AQ969W3 186 aa3.96□□□□□ -1.78
SSX3-201ENST00000298396 URB1-AS1Q96HZ7 61 aa3.96□□□□□ -1.78
SSX3-201ENST00000298396 IGLV4-60A0A075B6I1 120 aa3.95□□□□□ -1.78
SSX3-201ENST00000298396 TRBV25-1A0A075B6N4 114 aa3.95□□□□□ -1.78
SSX3-201ENST00000298396 TRAV8-6A0A0B4J262 113 aa3.95□□□□□ -1.78
SSX3-201ENST00000298396 LOC389332A0A1B0GUA5 103 aa3.95□□□□□ -1.78
SSX3-201ENST00000298396 LINC01546A6NGU7 62 aa3.95□□□□□ -1.78
SSX3-201ENST00000298396 VCYO14598 125 aa3.95□□□□□ -1.78
SSX3-201ENST00000298396 TCAPO15273 167 aa3.95□□□□□ -1.78
SSX3-201ENST00000298396 PPP1R17O96001 155 aa3.95□□□□□ -1.78
SSX3-201ENST00000298396 PMCHP20382 165 aa3.95□□□□□ -1.78
SSX3-201ENST00000298396 IFI27P40305 119 aaPredicted RBP3.95□□□□□ -1.78
SSX3-201ENST00000298396 AMTP48728 403 aa3.95□□□□□ -1.78
SSX3-201ENST00000298396 RBX1P62877 108 aa3.95□□□□□ -1.78
SSX3-201ENST00000298396 RPL39P62891 51 aaKnown RBP3.95□□□□□ -1.78
SSX3-201ENST00000298396 COX19Q49B96 90 aa3.95□□□□□ -1.78
SSX3-201ENST00000298396 Q8N976 141 aa3.95□□□□□ -1.78
SSX3-201ENST00000298396 C20orf203Q8NBC4 194 aa3.95□□□□□ -1.78
SSX3-201ENST00000298396 TMEM243Q9BU79 118 aa3.95□□□□□ -1.78
SSX3-201ENST00000298396 LAMTOR2Q9Y2Q5 125 aa3.95□□□□□ -1.78
SSX3-201ENST00000298396 TRAPPC1Q9Y5R8 145 aa3.95□□□□□ -1.78
SSX3-201ENST00000298396 LRP1BQ9NZR2 4599 aa3.94□□□□□ -1.78
SSX3-201ENST00000298396 IBA57-AS1B1ANH7 110 aa3.94□□□□□ -1.78
SSX3-201ENST00000298396 RAB5AP20339 215 aa3.94□□□□□ -1.78
SSX3-201ENST00000298396 S100A1P23297 94 aa3.94□□□□□ -1.78
SSX3-201ENST00000298396 TMEM97Q5BJF2 176 aa3.94□□□□□ -1.78
SSX3-201ENST00000298396 ENHOQ6UWT2 76 aa3.94□□□□□ -1.78
SSX3-201ENST00000298396 Q8N8P6 123 aa3.94□□□□□ -1.78
SSX3-201ENST00000298396 C18orf32Q8TCD1 76 aa3.94□□□□□ -1.78
SSX3-201ENST00000298396 CHCHD5Q9BSY4 110 aa3.94□□□□□ -1.78
SSX3-201ENST00000298396 MAP1LC3AQ9H492 121 aa3.94□□□□□ -1.78
SSX3-201ENST00000298396 A0A096LNJ9 63 aa3.93□□□□□ -1.78
SSX3-201ENST00000298396 A0A1B0GUV1 79 aa3.93□□□□□ -1.78
SSX3-201ENST00000298396 TRGC2P03986 189 aa3.93□□□□□ -1.78
SSX3-201ENST00000298396 FGF6P10767 208 aa3.93□□□□□ -1.78
SSX3-201ENST00000298396 KRTAP26-1Q6PEX3 210 aa3.93□□□□□ -1.78
SSX3-201ENST00000298396 MRPL52Q86TS9 123 aaKnown RBP3.93□□□□□ -1.78
SSX3-201ENST00000298396 MAPKAPK5-AS1Q8N8E1 139 aa3.93□□□□□ -1.78
SSX3-201ENST00000298396 KLK12Q9UKR0 248 aa3.93□□□□□ -1.78
SSX3-201ENST00000298396 TMEM262E9PQX1 116 aa3.92□□□□□ -1.78
SSX3-201ENST00000298396 H7C423 109 aa3.92□□□□□ -1.78
SSX3-201ENST00000298396 FCER1GP30273 86 aa3.92□□□□□ -1.78
SSX3-201ENST00000298396 WFDC2Q14508 124 aa3.92□□□□□ -1.78
SSX3-201ENST00000298396 LAGE3Q14657 143 aa3.92□□□□□ -1.78
SSX3-201ENST00000298396 TTC32Q5I0X7 151 aa3.92□□□□□ -1.78
SSX3-201ENST00000298396 C1orf134Q5TEV5 83 aa3.92□□□□□ -1.78
SSX3-201ENST00000298396 CLPSL2Q6UWE3 100 aa3.92□□□□□ -1.78
SSX3-201ENST00000298396 Q6ZUT4 128 aa3.92□□□□□ -1.78
SSX3-201ENST00000298396 C6orf223Q8N319 242 aa3.92□□□□□ -1.78
SSX3-201ENST00000298396 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.92□□□□□ -1.78
SSX3-201ENST00000298396 NTN5Q8WTR8 489 aaPredicted RBP3.92□□□□□ -1.78
SSX3-201ENST00000298396 KIR2DL4Q99706 377 aa3.92□□□□□ -1.78
SSX3-201ENST00000298396 OPRPNQ99935 248 aaPredicted RBP3.92□□□□□ -1.78
SSX3-201ENST00000298396 Q9HAA7 133 aa3.92□□□□□ -1.78
SSX3-201ENST00000298396 NXT2Q9NPJ8 142 aaKnown RBP3.92□□□□□ -1.78
SSX3-201ENST00000298396 PRR34Q9NV39 138 aa3.92□□□□□ -1.78
SSX3-201ENST00000298396 UBE2D4Q9Y2X8 147 aa3.92□□□□□ -1.78
SSX3-201ENST00000298396 A0A087WX48 190 aa3.91□□□□□ -1.78
SSX3-201ENST00000298396 A0A1B0GVY2 172 aa3.91□□□□□ -1.78
SSX3-201ENST00000298396 K7EP13 123 aa3.91□□□□□ -1.78
SSX3-201ENST00000298396 UBE2L6O14933 153 aa3.91□□□□□ -1.78
SSX3-201ENST00000298396 NUPR1O60356 82 aa3.91□□□□□ -1.78
SSX3-201ENST00000298396 ANGP03950 147 aaKnown RBP3.91□□□□□ -1.78
SSX3-201ENST00000298396 RNASE13Q5GAN3 156 aaKnown RBP3.91□□□□□ -1.78
SSX3-201ENST00000298396 ZC2HC1BQ5TFG8 222 aa3.91□□□□□ -1.78
SSX3-201ENST00000298396 LINC00173Q6ZV60 143 aa3.91□□□□□ -1.78
SSX3-201ENST00000298396 LINC00269Q8N2A0 174 aa3.91□□□□□ -1.78
SSX3-201ENST00000298396 C10orf126Q8N4M7 172 aa3.91□□□□□ -1.78
SSX3-201ENST00000298396 TIMM21Q9BVV7 248 aa3.91□□□□□ -1.78
SSX3-201ENST00000298396 CDC42SE2Q9NRR3 84 aa3.91□□□□□ -1.78
SSX3-201ENST00000298396 APOBP04114 4563 aaKnown RBP3.9□□□□□ -1.78
SSX3-201ENST00000298396 IGLV4-3A0A075B6K6 122 aa3.9□□□□□ -1.79
SSX3-201ENST00000298396 LRCOL1A6NCL2 159 aa3.9□□□□□ -1.79
SSX3-201ENST00000298396 IGIPA6NJ69 53 aa3.9□□□□□ -1.79
SSX3-201ENST00000298396 HIST1H2BKO60814 126 aa3.9□□□□□ -1.79
SSX3-201ENST00000298396 HIST1H2BJP06899 126 aa3.9□□□□□ -1.79
SSX3-201ENST00000298396 HIST1H2BOP23527 126 aa3.9□□□□□ -1.79
SSX3-201ENST00000298396 HIST1H2BBP33778 126 aa3.9□□□□□ -1.79
SSX3-201ENST00000298396 HIST1H2BDP58876 126 aa3.9□□□□□ -1.79
SSX3-201ENST00000298396 PKIAP61925 76 aa3.9□□□□□ -1.79
SSX3-201ENST00000298396 HIST1H2BCP62807 126 aa3.9□□□□□ -1.79
SSX3-201ENST00000298396 REG3AQ06141 175 aa3.9□□□□□ -1.79
SSX3-201ENST00000298396 PMCHL1Q16048 86 aa3.9□□□□□ -1.79
SSX3-201ENST00000298396 HIST2H2BEQ16778 126 aa3.9□□□□□ -1.79
SSX3-201ENST00000298396 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.9□□□□□ -1.79
SSX3-201ENST00000298396 RNASEKQ6P5S7 137 aaKnown RBP3.9□□□□□ -1.79
SSX3-201ENST00000298396 C2orf66Q6UXQ4 117 aa3.9□□□□□ -1.79
SSX3-201ENST00000298396 HIST1H2BHQ93079 126 aa3.9□□□□□ -1.79
SSX3-201ENST00000298396 UBE2WQ96B02 151 aa3.9□□□□□ -1.79
SSX3-201ENST00000298396 TOMM6Q96B49 74 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms