RNA–Protein interactions for RNA: ENST00000297979.9

C9orf3-202, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best) BASIC

Gene C9orf3, Length 2,820 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-202ENST00000297979 CDIP1Q9H305 208 aa10.2□□□□□ -0.78
C9orf3-202ENST00000297979 TRBV20-1A0A075B6N2 111 aa10.2□□□□□ -0.78
C9orf3-202ENST00000297979 APOC4P55056 127 aa10.2□□□□□ -0.78
C9orf3-202ENST00000297979 XGP55808 180 aa10.2□□□□□ -0.78
C9orf3-202ENST00000297979 ZMAT4Q9H898 229 aa10.2□□□□□ -0.78
C9orf3-202ENST00000297979 TRAV12-1A0A0B4J245 112 aa10.2□□□□□ -0.78
C9orf3-202ENST00000297979 RPL39P62891 51 aaKnown RBP10.2□□□□□ -0.78
C9orf3-202ENST00000297979 SPANXB1Q9NS25 103 aaPredicted RBP10.2□□□□□ -0.78
C9orf3-202ENST00000297979 Q9UF83 564 aa10.2□□□□□ -0.78
C9orf3-202ENST00000297979 NDUFV3P56181 108 aaKnown RBP10.19□□□□□ -0.78
C9orf3-202ENST00000297979 TRGV2A0A075B6R0 118 aa10.19□□□□□ -0.78
C9orf3-202ENST00000297979 IGKCP01834 107 aa10.19□□□□□ -0.78
C9orf3-202ENST00000297979 IGIPA6NJ69 53 aa10.18□□□□□ -0.78
C9orf3-202ENST00000297979 DPM2O94777 84 aa10.18□□□□□ -0.78
C9orf3-202ENST00000297979 X6R8D5 127 aa10.18□□□□□ -0.78
C9orf3-202ENST00000297979 TIMM17AQ99595 171 aa10.18□□□□□ -0.78
C9orf3-202ENST00000297979 MRPL35Q9NZE8 188 aaKnown RBP10.18□□□□□ -0.78
C9orf3-202ENST00000297979 K7EQD1 137 aa10.17□□□□□ -0.78
C9orf3-202ENST00000297979 TAL2Q16559 108 aa10.17□□□□□ -0.78
C9orf3-202ENST00000297979 C20orf203Q8NBC4 194 aa10.17□□□□□ -0.78
C9orf3-202ENST00000297979 TMEM141Q96I45 108 aa10.17□□□□□ -0.78
C9orf3-202ENST00000297979 ZNRF2Q8NHG8 242 aa10.17□□□□□ -0.78
C9orf3-202ENST00000297979 TRBV10-1A0A0K0K1A3 114 aa10.16□□□□□ -0.78
C9orf3-202ENST00000297979 C9orf118A6NHY6 69 aa10.16□□□□□ -0.78
C9orf3-202ENST00000297979 PRSS29PA6NIE9 313 aa10.16□□□□□ -0.78
C9orf3-202ENST00000297979 F8VRH5 84 aa10.16□□□□□ -0.78
C9orf3-202ENST00000297979 PLNP26678 52 aa10.16□□□□□ -0.78
C9orf3-202ENST00000297979 DEFB135Q30KP9 77 aa10.16□□□□□ -0.78
C9orf3-202ENST00000297979 SPCS1Q9Y6A9 102 aa10.16□□□□□ -0.78
C9orf3-202ENST00000297979 H3BUT2 72 aa10.15□□□□□ -0.78
C9orf3-202ENST00000297979 IGHV4-30-4P0DP06 118 aa10.15□□□□□ -0.78
C9orf3-202ENST00000297979 PRADC1Q9BSG0 188 aa10.15□□□□□ -0.78
C9orf3-202ENST00000297979 FBN1P35555 2871 aaKnown RBP10.15□□□□□ -0.78
C9orf3-202ENST00000297979 SLC25A29Q8N8R3 303 aa10.15□□□□□ -0.78
C9orf3-202ENST00000297979 HHLA3Q9XRX5 114 aa10.15□□□□□ -0.78
C9orf3-202ENST00000297979 SLC25A34Q6PIV7 304 aa10.15□□□□□ -0.79
C9orf3-202ENST00000297979 TRBV7-3A0A075B6L6 115 aa10.14□□□□□ -0.79
C9orf3-202ENST00000297979 A0A1B0GX51 115 aa10.14□□□□□ -0.79
C9orf3-202ENST00000297979 RPL36AP83881 106 aaKnown RBP10.14□□□□□ -0.79
C9orf3-202ENST00000297979 PHLDA1Q8WV24 401 aaPredicted RBP10.14□□□□□ -0.79
C9orf3-202ENST00000297979 RPL36ALQ969Q0 106 aaKnown RBP10.14□□□□□ -0.79
C9orf3-202ENST00000297979 OXTP01178 125 aa10.14□□□□□ -0.79
C9orf3-202ENST00000297979 COX8AP10176 69 aa10.14□□□□□ -0.79
C9orf3-202ENST00000297979 DGAT2L7PQ6IED9 249 aa10.14□□□□□ -0.79
C9orf3-202ENST00000297979 TRRAPQ9Y4A5 3859 aa10.14□□□□□ -0.79
C9orf3-202ENST00000297979 IGHV3-38A0A0C4DH36 116 aa10.13□□□□□ -0.79
C9orf3-202ENST00000297979 PMVKQ15126 192 aa10.13□□□□□ -0.79
C9orf3-202ENST00000297979 LINC01620Q4KN68 170 aa10.13□□□□□ -0.79
C9orf3-202ENST00000297979 LINC00612Q8N6U2 182 aa10.13□□□□□ -0.79
C9orf3-202ENST00000297979 TP73-AS1Q9UF72 201 aa10.13□□□□□ -0.79
C9orf3-202ENST00000297979 FAM236DA0A1B0GTK5 79 aa10.13□□□□□ -0.79
C9orf3-202ENST00000297979 FAM236CP0DP71 79 aa10.13□□□□□ -0.79
C9orf3-202ENST00000297979 ZC2HC1BQ5TFG8 222 aa10.13□□□□□ -0.79
C9orf3-202ENST00000297979 C1orf195Q5TG92 126 aa10.13□□□□□ -0.79
C9orf3-202ENST00000297979 FAM19A1Q7Z5A9 133 aa10.13□□□□□ -0.79
C9orf3-202ENST00000297979 TRGV4A0A0C4DH28 118 aa10.12□□□□□ -0.79
C9orf3-202ENST00000297979 KRTAP10-11P60412 298 aa10.12□□□□□ -0.79
C9orf3-202ENST00000297979 EGFEM1PQ0D2K5 195 aa10.12□□□□□ -0.79
C9orf3-202ENST00000297979 CHCHD7Q9BUK0 85 aa10.12□□□□□ -0.79
C9orf3-202ENST00000297979 TRBV6-4A0A1B0GX49 114 aa10.12□□□□□ -0.79
C9orf3-202ENST00000297979 DEFB130BP0DP73 79 aa10.11□□□□□ -0.79
C9orf3-202ENST00000297979 DEFB130AP0DP74 79 aa10.11□□□□□ -0.79
C9orf3-202ENST00000297979 CARD19Q96LW7 228 aa10.11□□□□□ -0.79
C9orf3-202ENST00000297979 NMUP48645 174 aa10.11□□□□□ -0.79
C9orf3-202ENST00000297979 UBE2D3P61077 147 aa10.11□□□□□ -0.79
C9orf3-202ENST00000297979 UBE2D2P62837 147 aa10.11□□□□□ -0.79
C9orf3-202ENST00000297979 FHL2Q14192 279 aa10.11□□□□□ -0.79
C9orf3-202ENST00000297979 GAGE13Q4V321 117 aa10.11□□□□□ -0.79
C9orf3-202ENST00000297979 DAZ4Q86SG3 579 aaKnown RBP10.11□□□□□ -0.79
C9orf3-202ENST00000297979 DAZ3Q9NR90 486 aaKnown RBP10.11□□□□□ -0.79
C9orf3-202ENST00000297979 PYGO1Q9Y3Y4 419 aa10.11□□□□□ -0.79
C9orf3-202ENST00000297979 A6NDN8 102 aa10.1□□□□□ -0.79
C9orf3-202ENST00000297979 IGLV4-3A0A075B6K6 122 aa10.1□□□□□ -0.79
C9orf3-202ENST00000297979 LYRM9A8MSI8 78 aa10.1□□□□□ -0.79
C9orf3-202ENST00000297979 FGF6P10767 208 aa10.1□□□□□ -0.79
C9orf3-202ENST00000297979 RPS28P62857 69 aaKnown RBP10.1□□□□□ -0.79
C9orf3-202ENST00000297979 SH2D6Q7Z4S9 175 aa10.1□□□□□ -0.79
C9orf3-202ENST00000297979 OPRPNQ99935 248 aaPredicted RBP10.1□□□□□ -0.79
C9orf3-202ENST00000297979 IFITM1P13164 125 aa10.09□□□□□ -0.79
C9orf3-202ENST00000297979 PAPPA-AS1Q5QFB9 102 aa10.09□□□□□ -0.79
C9orf3-202ENST00000297979 IGHV4-28A0A0C4DH34 117 aa10.09□□□□□ -0.79
C9orf3-202ENST00000297979 MIFP14174 115 aa10.09□□□□□ -0.79
C9orf3-202ENST00000297979 WFDC2Q14508 124 aa10.09□□□□□ -0.79
C9orf3-202ENST00000297979 FAM222AQ5U5X8 452 aa10.09□□□□□ -0.79
C9orf3-202ENST00000297979 IGLV4-69A0A075B6H9 119 aa10.08□□□□□ -0.8
C9orf3-202ENST00000297979 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.08□□□□□ -0.8
C9orf3-202ENST00000297979 IGKV2D-26A0A0A0MRZ7 120 aa10.08□□□□□ -0.8
C9orf3-202ENST00000297979 IGKV2-29A2NJV5 120 aaPredicted RBP10.08□□□□□ -0.8
C9orf3-202ENST00000297979 H3BRM9 83 aa10.08□□□□□ -0.8
C9orf3-202ENST00000297979 ETDBQ3ZM63 59 aa10.08□□□□□ -0.8
C9orf3-202ENST00000297979 A0A1W2PPM0 123 aa10.08□□□□□ -0.8
C9orf3-202ENST00000297979 TTC32Q5I0X7 151 aa10.08□□□□□ -0.8
C9orf3-202ENST00000297979 UBE2D4Q9Y2X8 147 aa10.08□□□□□ -0.8
C9orf3-202ENST00000297979 LOC100131303A0A0U1RQF7 123 aa10.07□□□□□ -0.8
C9orf3-202ENST00000297979 PCP2Q8IVA1 136 aa10.07□□□□□ -0.8
C9orf3-202ENST00000297979 Q8NAQ8 132 aa10.07□□□□□ -0.8
C9orf3-202ENST00000297979 C11orf86A6NJI1 115 aa10.06□□□□□ -0.8
C9orf3-202ENST00000297979 DEFB4AO15263 64 aa10.06□□□□□ -0.8
C9orf3-202ENST00000297979 CEMP1Q6PRD7 247 aaPredicted RBP10.06□□□□□ -0.8
C9orf3-202ENST00000297979 STAB1Q9NY15 2570 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms