RNA–Protein interactions for RNA: ENST00000297423.8

SPIDR-201, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPIDR, Length 3,988 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-201ENST00000297423 C3orf22Q8N5N4 141 aa10.97□□□□□ -0.65
SPIDR-201ENST00000297423 J3QKU1 62 aa10.97□□□□□ -0.65
SPIDR-201ENST00000297423 NDUFA4O00483 81 aa10.96□□□□□ -0.65
SPIDR-201ENST00000297423 Q9UF83 564 aa10.96□□□□□ -0.65
SPIDR-201ENST00000297423 C19orf54Q5BKX5 351 aa10.96□□□□□ -0.65
SPIDR-201ENST00000297423 TMEM61Q8N0U2 210 aa10.96□□□□□ -0.66
SPIDR-201ENST00000297423 LINC01587Q99440 93 aa10.96□□□□□ -0.66
SPIDR-201ENST00000297423 LINC00315P59091 139 aa10.95□□□□□ -0.66
SPIDR-201ENST00000297423 PIK3CD-AS1Q5SR53 167 aa10.95□□□□□ -0.66
SPIDR-201ENST00000297423 LINC01356Q8N9X3 169 aa10.95□□□□□ -0.66
SPIDR-201ENST00000297423 IGHV4OR15-8A0A075B7B6 117 aa10.95□□□□□ -0.66
SPIDR-201ENST00000297423 A0A087WW49 117 aa10.95□□□□□ -0.66
SPIDR-201ENST00000297423 TRACP01848 142 aa10.95□□□□□ -0.66
SPIDR-201ENST00000297423 ATP5G1P05496 136 aa10.95□□□□□ -0.66
SPIDR-201ENST00000297423 C14orf132Q9NPU4 83 aa10.95□□□□□ -0.66
SPIDR-201ENST00000297423 LINC00158P58513 81 aa10.94□□□□□ -0.66
SPIDR-201ENST00000297423 Q8N6K4 173 aa10.94□□□□□ -0.66
SPIDR-201ENST00000297423 C5orf56Q8N8D9 126 aa10.94□□□□□ -0.66
SPIDR-201ENST00000297423 CHD6Q8TD26 2715 aa10.94□□□□□ -0.66
SPIDR-201ENST00000297423 A0A087WVE0 104 aa10.94□□□□□ -0.66
SPIDR-201ENST00000297423 FAM19A5Q7Z5A7 132 aaPredicted RBP10.94□□□□□ -0.66
SPIDR-201ENST00000297423 FAM223BA6NKX1 122 aa10.93□□□□□ -0.66
SPIDR-201ENST00000297423 J3KT08 172 aa10.93□□□□□ -0.66
SPIDR-201ENST00000297423 FAM223AQ8IWN6 122 aa10.93□□□□□ -0.66
SPIDR-201ENST00000297423 KIF25-AS1Q9Y6Z4 181 aa10.93□□□□□ -0.66
SPIDR-201ENST00000297423 IGHV4-38-2P0DP08 117 aa10.93□□□□□ -0.66
SPIDR-201ENST00000297423 PEMTQ9UBM1 199 aa10.93□□□□□ -0.66
SPIDR-201ENST00000297423 UQCRQO14949 82 aa10.93□□□□□ -0.66
SPIDR-201ENST00000297423 PFN2P35080 140 aa10.93□□□□□ -0.66
SPIDR-201ENST00000297423 LINC00643Q86TS7 51 aa10.93□□□□□ -0.66
SPIDR-201ENST00000297423 VSIG2Q96IQ7 327 aa10.93□□□□□ -0.66
SPIDR-201ENST00000297423 EBI3Q14213 229 aa10.92□□□□□ -0.66
SPIDR-201ENST00000297423 DEFB113Q30KQ7 82 aa10.92□□□□□ -0.66
SPIDR-201ENST00000297423 DSCR8Q96T75 97 aa10.92□□□□□ -0.66
SPIDR-201ENST00000297423 CRPP02741 224 aa10.92□□□□□ -0.66
SPIDR-201ENST00000297423 CSDC2Q9Y534 153 aaKnown RBP10.92□□□□□ -0.66
SPIDR-201ENST00000297423 FLNCQ14315 2725 aa10.92□□□□□ -0.66
SPIDR-201ENST00000297423 DEFB131AP59861 70 aa10.92□□□□□ -0.66
SPIDR-201ENST00000297423 SPANXA1Q9NS26 97 aa10.92□□□□□ -0.66
SPIDR-201ENST00000297423 TIRAPP58753 221 aa10.91□□□□□ -0.66
SPIDR-201ENST00000297423 UBE2E2Q96LR5 201 aa10.91□□□□□ -0.66
SPIDR-201ENST00000297423 LINC00467Q9BRT7 94 aa10.91□□□□□ -0.66
SPIDR-201ENST00000297423 KRTAP10-9P60411 292 aa10.91□□□□□ -0.66
SPIDR-201ENST00000297423 PAX4O43316 350 aa10.9□□□□□ -0.66
SPIDR-201ENST00000297423 C10orf99Q6UWK7 81 aa10.9□□□□□ -0.66
SPIDR-201ENST00000297423 RNF152Q8N8N0 203 aa10.9□□□□□ -0.66
SPIDR-201ENST00000297423 SLPIP03973 132 aa10.9□□□□□ -0.66
SPIDR-201ENST00000297423 Q8N2B8 174 aa10.9□□□□□ -0.66
SPIDR-201ENST00000297423 HRNRQ86YZ3 2850 aaPredicted RBP10.89□□□□□ -0.67
SPIDR-201ENST00000297423 MED14OSP0DP75 135 aa10.89□□□□□ -0.67
SPIDR-201ENST00000297423 LINC00308Q8TCZ7 52 aa10.89□□□□□ -0.67
SPIDR-201ENST00000297423 U3KQE9 123 aa10.89□□□□□ -0.67
SPIDR-201ENST00000297423 Q96MF0 132 aa10.89□□□□□ -0.67
SPIDR-201ENST00000297423 SMCR5Q8TEV8 140 aa10.89□□□□□ -0.67
SPIDR-201ENST00000297423 UBE2L6O14933 153 aa10.88□□□□□ -0.67
SPIDR-201ENST00000297423 DYNLRB2Q8TF09 96 aa10.88□□□□□ -0.67
SPIDR-201ENST00000297423 DNAJC30Q96LL9 226 aa10.88□□□□□ -0.67
SPIDR-201ENST00000297423 COX7A2LO14548 114 aa10.88□□□□□ -0.67
SPIDR-201ENST00000297423 WFDC9Q8NEX5 89 aa10.88□□□□□ -0.67
SPIDR-201ENST00000297423 KIR2DL5BQ8NHK3 375 aa10.88□□□□□ -0.67
SPIDR-201ENST00000297423 CELSR1Q9NYQ6 3014 aa10.88□□□□□ -0.67
SPIDR-201ENST00000297423 SMIM9A6NGZ8 99 aa10.87□□□□□ -0.67
SPIDR-201ENST00000297423 ACYP1P07311 99 aa10.87□□□□□ -0.67
SPIDR-201ENST00000297423 INAFM2P0DMQ5 153 aa10.87□□□□□ -0.67
SPIDR-201ENST00000297423 CFHR3Q02985 330 aa10.87□□□□□ -0.67
SPIDR-201ENST00000297423 TRGV1A0A0A0MS02 117 aa10.86□□□□□ -0.67
SPIDR-201ENST00000297423 J3QLI3 93 aa10.86□□□□□ -0.67
SPIDR-201ENST00000297423 C5orf47Q569G3 176 aa10.86□□□□□ -0.67
SPIDR-201ENST00000297423 PLA2G2AP14555 144 aa10.86□□□□□ -0.67
SPIDR-201ENST00000297423 USMG5Q96IX5 58 aa10.86□□□□□ -0.67
SPIDR-201ENST00000297423 XCL2Q9UBD3 114 aa10.86□□□□□ -0.67
SPIDR-201ENST00000297423 FLNBO75369 2602 aaKnown RBP10.86□□□□□ -0.67
SPIDR-201ENST00000297423 ATRQ13535 2644 aa10.86□□□□□ -0.67
SPIDR-201ENST00000297423 ANKRD17O75179 2603 aaKnown RBP10.86□□□□□ -0.67
SPIDR-201ENST00000297423 HRCT1Q6UXD1 115 aa10.85□□□□□ -0.67
SPIDR-201ENST00000297423 KLLNB2CW77 178 aa10.85□□□□□ -0.67
SPIDR-201ENST00000297423 HIST2H2BCQ6DN03 193 aa10.85□□□□□ -0.67
SPIDR-201ENST00000297423 TRBV6-5A0A0K0K1A5 114 aa10.85□□□□□ -0.67
SPIDR-201ENST00000297423 COX7CP15954 63 aa10.85□□□□□ -0.67
SPIDR-201ENST00000297423 DEFB136Q30KP8 78 aa10.85□□□□□ -0.67
SPIDR-201ENST00000297423 NCR3O14931 201 aa10.84□□□□□ -0.67
SPIDR-201ENST00000297423 LECT2O14960 151 aa10.84□□□□□ -0.67
SPIDR-201ENST00000297423 COX6A2Q02221 97 aa10.84□□□□□ -0.67
SPIDR-201ENST00000297423 LRRC75A-AS1Q8N1F1 130 aa10.84□□□□□ -0.67
SPIDR-201ENST00000297423 RPL36AP83881 106 aaKnown RBP10.84□□□□□ -0.67
SPIDR-201ENST00000297423 RPL36ALQ969Q0 106 aaKnown RBP10.84□□□□□ -0.67
SPIDR-201ENST00000297423 TRAV23DV6A0A075B6W5 121 aa10.83□□□□□ -0.68
SPIDR-201ENST00000297423 ATOX1O00244 68 aa10.83□□□□□ -0.68
SPIDR-201ENST00000297423 SOCS3O14543 225 aa10.83□□□□□ -0.68
SPIDR-201ENST00000297423 MRPS36P82909 103 aaKnown RBP10.83□□□□□ -0.68
SPIDR-201ENST00000297423 LITAFQ99732 161 aa10.83□□□□□ -0.68
SPIDR-201ENST00000297423 SPANXDQ9BXN6 97 aa10.83□□□□□ -0.68
SPIDR-201ENST00000297423 SPANXCQ9NY87 97 aa10.83□□□□□ -0.68
SPIDR-201ENST00000297423 A0A0J9YX75 114 aa10.83□□□□□ -0.68
SPIDR-201ENST00000297423 TRBV7-7A0A0K0K1E9 115 aa10.83□□□□□ -0.68
SPIDR-201ENST00000297423 AVPP01185 164 aa10.83□□□□□ -0.68
SPIDR-201ENST00000297423 MALP21145 153 aa10.83□□□□□ -0.68
SPIDR-201ENST00000297423 CITED2Q99967 270 aaPredicted RBP10.83□□□□□ -0.68
SPIDR-201ENST00000297423 DEFB112Q30KQ8 113 aa10.83□□□□□ -0.68
SPIDR-201ENST00000297423 APRG1Q8IVJ8 170 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 184.5 ms