RNA–Protein interactions for RNA: ENST00000288986.6

NCK1-201, Transcript of NCK adaptor protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCK1, Length 1,937 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-201ENST00000288986 LYPD5Q6UWN5 251 aa10.6□□□□□ -0.71
NCK1-201ENST00000288986 Q6ZN92 141 aa10.6□□□□□ -0.71
NCK1-201ENST00000288986 NTM-AS1Q6ZSK4 140 aa10.6□□□□□ -0.71
NCK1-201ENST00000288986 GTSF1LQ9H1H1 148 aa10.6□□□□□ -0.71
NCK1-201ENST00000288986 NPSP0C0P6 89 aa10.59□□□□□ -0.71
NCK1-201ENST00000288986 ATP6V0E2Q8NHE4 81 aa10.59□□□□□ -0.71
NCK1-201ENST00000288986 HYDINQ4G0P3 5121 aa10.59□□□□□ -0.71
NCK1-201ENST00000288986 KMT2AQ03164 3969 aa10.59□□□□□ -0.71
NCK1-201ENST00000288986 MAJINQ3KP22 176 aa10.58□□□□□ -0.72
NCK1-201ENST00000288986 FAM104AQ969W3 186 aa10.58□□□□□ -0.72
NCK1-201ENST00000288986 PAM16Q9Y3D7 125 aa10.58□□□□□ -0.72
NCK1-201ENST00000288986 ALMS1Q8TCU4 4167 aa10.58□□□□□ -0.72
NCK1-201ENST00000288986 VPS13DQ5THJ4 4388 aa10.58□□□□□ -0.72
NCK1-201ENST00000288986 DNAH1Q9P2D7 4330 aa10.57□□□□□ -0.72
NCK1-201ENST00000288986 UBE2D4Q9Y2X8 147 aa10.57□□□□□ -0.72
NCK1-201ENST00000288986 TSTD3H0UI37 97 aa10.56□□□□□ -0.72
NCK1-201ENST00000288986 SPATA45Q537H7 98 aa10.56□□□□□ -0.72
NCK1-201ENST00000288986 TIMM21Q9BVV7 248 aa10.56□□□□□ -0.72
NCK1-201ENST00000288986 PRO1933Q9H354 126 aa10.56□□□□□ -0.72
NCK1-201ENST00000288986 SPANXA1Q9NS26 97 aa10.56□□□□□ -0.72
NCK1-201ENST00000288986 MRPL35Q9NZE8 188 aaKnown RBP10.56□□□□□ -0.72
NCK1-201ENST00000288986 IGLV4-3A0A075B6K6 122 aa10.56□□□□□ -0.72
NCK1-201ENST00000288986 PRSS29PA6NIE9 313 aa10.56□□□□□ -0.72
NCK1-201ENST00000288986 F8VRH5 84 aa10.56□□□□□ -0.72
NCK1-201ENST00000288986 hDV102S1A0JD36 115 aa10.55□□□□□ -0.72
NCK1-201ENST00000288986 PMVKQ15126 192 aa10.55□□□□□ -0.72
NCK1-201ENST00000288986 MRPS16Q9Y3D3 137 aaKnown RBP10.55□□□□□ -0.72
NCK1-201ENST00000288986 RYR3Q15413 4870 aa10.55□□□□□ -0.72
NCK1-201ENST00000288986 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.54□□□□□ -0.72
NCK1-201ENST00000288986 IGKV2-29A2NJV5 120 aaPredicted RBP10.54□□□□□ -0.72
NCK1-201ENST00000288986 PCP4L1A6NKN8 68 aa10.54□□□□□ -0.72
NCK1-201ENST00000288986 DPM2O94777 84 aa10.54□□□□□ -0.72
NCK1-201ENST00000288986 IGKCP01834 107 aa10.54□□□□□ -0.72
NCK1-201ENST00000288986 CST9LQ9H4G1 147 aa10.54□□□□□ -0.72
NCK1-201ENST00000288986 Q9H8V8 135 aa10.54□□□□□ -0.72
NCK1-201ENST00000288986 RYR2Q92736 4967 aa10.54□□□□□ -0.72
NCK1-201ENST00000288986 TMEM97Q5BJF2 176 aa10.54□□□□□ -0.72
NCK1-201ENST00000288986 MRPL52Q86TS9 123 aaKnown RBP10.54□□□□□ -0.72
NCK1-201ENST00000288986 AMELXQ99217 191 aa10.54□□□□□ -0.72
NCK1-201ENST00000288986 OPRPNQ99935 248 aaPredicted RBP10.54□□□□□ -0.72
NCK1-201ENST00000288986 CHTOPQ9Y3Y2 248 aaKnown RBP10.54□□□□□ -0.72
NCK1-201ENST00000288986 PLNP26678 52 aa10.53□□□□□ -0.72
NCK1-201ENST00000288986 UPK3BQ9BT76 320 aa10.53□□□□□ -0.72
NCK1-201ENST00000288986 CSDC2Q9Y534 153 aaKnown RBP10.53□□□□□ -0.72
NCK1-201ENST00000288986 H7C423 109 aa10.52□□□□□ -0.72
NCK1-201ENST00000288986 MRPS36P82909 103 aaKnown RBP10.52□□□□□ -0.72
NCK1-201ENST00000288986 PAPPA-AS1Q5QFB9 102 aa10.52□□□□□ -0.72
NCK1-201ENST00000288986 IGLV4-69A0A075B6H9 119 aa10.52□□□□□ -0.73
NCK1-201ENST00000288986 TRBV6-8A0A0A6YYG3 113 aa10.52□□□□□ -0.73
NCK1-201ENST00000288986 HSBP1L1C9JCN9 74 aa10.52□□□□□ -0.73
NCK1-201ENST00000288986 IGLC3P0DOY3 106 aa10.52□□□□□ -0.73
NCK1-201ENST00000288986 TIRAPP58753 221 aa10.52□□□□□ -0.73
NCK1-201ENST00000288986 TMEM243Q9BU79 118 aa10.52□□□□□ -0.73
NCK1-201ENST00000288986 TRBV25-1A0A075B6N4 114 aa10.51□□□□□ -0.73
NCK1-201ENST00000288986 M0R2N4 97 aa10.51□□□□□ -0.73
NCK1-201ENST00000288986 ZC2HC1BQ5TFG8 222 aa10.51□□□□□ -0.73
NCK1-201ENST00000288986 TRAV8-6A0A0B4J262 113 aa10.5□□□□□ -0.73
NCK1-201ENST00000288986 SIVA1O15304 175 aa10.5□□□□□ -0.73
NCK1-201ENST00000288986 LELP1Q5T871 98 aa10.5□□□□□ -0.73
NCK1-201ENST00000288986 DDTP30046 118 aa10.5□□□□□ -0.73
NCK1-201ENST00000288986 ANKRD39Q53RE8 183 aa10.5□□□□□ -0.73
NCK1-201ENST00000288986 WFDC10BQ8IUB3 73 aa10.5□□□□□ -0.73
NCK1-201ENST00000288986 STPG4Q8N801 248 aa10.5□□□□□ -0.73
NCK1-201ENST00000288986 MIEN1Q9BRT3 115 aa10.5□□□□□ -0.73
NCK1-201ENST00000288986 VCX2Q9H322 139 aa10.5□□□□□ -0.73
NCK1-201ENST00000288986 FGF6P10767 208 aa10.49□□□□□ -0.73
NCK1-201ENST00000288986 NFE4Q86UQ8 179 aa10.49□□□□□ -0.73
NCK1-201ENST00000288986 SMAGPQ0VAQ4 97 aa10.48□□□□□ -0.73
NCK1-201ENST00000288986 Q6ZUT4 128 aa10.48□□□□□ -0.73
NCK1-201ENST00000288986 C11orf86A6NJI1 115 aa10.47□□□□□ -0.73
NCK1-201ENST00000288986 UQCR10Q9UDW1 63 aa10.47□□□□□ -0.73
NCK1-201ENST00000288986 NBDYA0A0U1RRE5 68 aa10.46□□□□□ -0.73
NCK1-201ENST00000288986 LINC00587B1AMM8 73 aa10.46□□□□□ -0.73
NCK1-201ENST00000288986 ZNF25P17030 456 aaPredicted RBP10.46□□□□□ -0.73
NCK1-201ENST00000288986 C14orf144Q96I85 54 aa10.46□□□□□ -0.73
NCK1-201ENST00000288986 CDC42SE2Q9NRR3 84 aa10.46□□□□□ -0.74
NCK1-201ENST00000288986 UBE2L6O14933 153 aa10.45□□□□□ -0.74
NCK1-201ENST00000288986 COX8AP10176 69 aa10.45□□□□□ -0.74
NCK1-201ENST00000288986 DGAT2L7PQ6IED9 249 aa10.45□□□□□ -0.74
NCK1-201ENST00000288986 RNASE13Q5GAN3 156 aaKnown RBP10.45□□□□□ -0.74
NCK1-201ENST00000288986 IGKV2D-26A0A0A0MRZ7 120 aa10.44□□□□□ -0.74
NCK1-201ENST00000288986 DNAH10OSP0CZ25 163 aa10.44□□□□□ -0.74
NCK1-201ENST00000288986 UBE2D1P51668 147 aa10.44□□□□□ -0.74
NCK1-201ENST00000288986 TTC32Q5I0X7 151 aa10.44□□□□□ -0.74
NCK1-201ENST00000288986 FAM19A3Q7Z5A8 133 aa10.44□□□□□ -0.74
NCK1-201ENST00000288986 OR5A1Q8NGJ0 315 aa10.44□□□□□ -0.74
NCK1-201ENST00000288986 A0A0J9YXV3 536 aa10.43□□□□□ -0.74
NCK1-201ENST00000288986 TMEM262E9PQX1 116 aa10.43□□□□□ -0.74
NCK1-201ENST00000288986 AMMECR1LQ6DCA0 310 aa10.43□□□□□ -0.74
NCK1-201ENST00000288986 Q6ZR54 194 aa10.43□□□□□ -0.74
NCK1-201ENST00000288986 C2orf88Q9BSF0 95 aa10.43□□□□□ -0.74
NCK1-201ENST00000288986 CHCHD5Q9BSY4 110 aa10.43□□□□□ -0.74
NCK1-201ENST00000288986 CHAC1Q9BUX1 264 aa10.43□□□□□ -0.74
NCK1-201ENST00000288986 A0A1B0GUV1 79 aa10.43□□□□□ -0.74
NCK1-201ENST00000288986 IGHV3-30P01768 117 aa10.43□□□□□ -0.74
NCK1-201ENST00000288986 IGHV3-33P01772 117 aa10.43□□□□□ -0.74
NCK1-201ENST00000288986 IGHV3-30-3P0DP02 117 aa10.43□□□□□ -0.74
NCK1-201ENST00000288986 IGHV3-30-5P0DP03 117 aa10.43□□□□□ -0.74
NCK1-201ENST00000288986 GAGE6Q13070 117 aa10.43□□□□□ -0.74
NCK1-201ENST00000288986 LINC01556Q5JQF7 62 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms