RNA–Protein interactions for RNA: ENST00000288840.9

SMAD6-201, Transcript of SMAD family member 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD6, Length 3,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-201ENST00000288840 RBMY1A1P0DJD3 496 aaKnown RBP11.67□□□□□ -0.54
SMAD6-201ENST00000288840 RBMY1CP0DJD4 496 aa11.67□□□□□ -0.54
SMAD6-201ENST00000288840 RBMY1FQ15415 496 aaKnown RBP11.67□□□□□ -0.54
SMAD6-201ENST00000288840 Q6ZSN1 163 aa11.67□□□□□ -0.54
SMAD6-201ENST00000288840 ESM1Q9NQ30 184 aa11.67□□□□□ -0.54
SMAD6-201ENST00000288840 A0A0J9YXY3 114 aa11.66□□□□□ -0.54
SMAD6-201ENST00000288840 C1QTNF4Q9BXJ3 329 aa11.66□□□□□ -0.54
SMAD6-201ENST00000288840 TTC32Q5I0X7 151 aa11.66□□□□□ -0.54
SMAD6-201ENST00000288840 BBC3Q96PG8 261 aaPredicted RBP11.66□□□□□ -0.54
SMAD6-201ENST00000288840 NBEAL2Q6ZNJ1 2754 aa11.66□□□□□ -0.54
SMAD6-201ENST00000288840 BSNQ9UPA5 3926 aa11.65□□□□□ -0.54
SMAD6-201ENST00000288840 TMEM223A0PJW6 202 aa11.65□□□□□ -0.54
SMAD6-201ENST00000288840 IGHV3-30P01768 117 aa11.65□□□□□ -0.54
SMAD6-201ENST00000288840 IGHV3-30-5P0DP03 117 aa11.65□□□□□ -0.54
SMAD6-201ENST00000288840 CELSR2Q9HCU4 2923 aa11.65□□□□□ -0.54
SMAD6-201ENST00000288840 DEFB114Q30KQ6 69 aa11.64□□□□□ -0.55
SMAD6-201ENST00000288840 NFE4Q86UQ8 179 aa11.64□□□□□ -0.55
SMAD6-201ENST00000288840 CFAP126Q5VTH2 177 aa11.64□□□□□ -0.55
SMAD6-201ENST00000288840 TEX29Q8N6K0 151 aa11.63□□□□□ -0.55
SMAD6-201ENST00000288840 C3orf56Q8N813 242 aa11.63□□□□□ -0.55
SMAD6-201ENST00000288840 TRAV8-4A0A0B4J246 113 aa11.63□□□□□ -0.55
SMAD6-201ENST00000288840 TEN1Q86WV5 123 aa11.62□□□□□ -0.55
SMAD6-201ENST00000288840 C5orf38Q86SI9 138 aa11.62□□□□□ -0.55
SMAD6-201ENST00000288840 TRBV6-5A0A0K0K1A5 114 aa11.62□□□□□ -0.55
SMAD6-201ENST00000288840 LINC01546A6NGU7 62 aa11.62□□□□□ -0.55
SMAD6-201ENST00000288840 DEFB4AO15263 64 aa11.62□□□□□ -0.55
SMAD6-201ENST00000288840 DNAJC9-AS1A6NH13 148 aa11.61□□□□□ -0.55
SMAD6-201ENST00000288840 MT-ATP8P03928 68 aa11.61□□□□□ -0.55
SMAD6-201ENST00000288840 PLA2G2AP14555 144 aa11.61□□□□□ -0.55
SMAD6-201ENST00000288840 IGHV1-58A0A0C4DH39 117 aa11.61□□□□□ -0.55
SMAD6-201ENST00000288840 RBMY1BA6NDE4 496 aaKnown RBP11.61□□□□□ -0.55
SMAD6-201ENST00000288840 RBMY1EA6NEQ0 496 aaKnown RBP11.61□□□□□ -0.55
SMAD6-201ENST00000288840 RBMY1DP0C7P1 496 aaKnown RBP11.61□□□□□ -0.55
SMAD6-201ENST00000288840 PAX4O43316 350 aa11.6□□□□□ -0.55
SMAD6-201ENST00000288840 FAM19A4Q96LR4 140 aa11.6□□□□□ -0.55
SMAD6-201ENST00000288840 CARD19Q96LW7 228 aa11.6□□□□□ -0.55
SMAD6-201ENST00000288840 HELZ2Q9BYK8 2649 aaKnown RBP11.6□□□□□ -0.55
SMAD6-201ENST00000288840 DNAL4O96015 105 aa11.6□□□□□ -0.55
SMAD6-201ENST00000288840 GAGE2BQ13066 116 aa11.6□□□□□ -0.55
SMAD6-201ENST00000288840 GAGE2EQ4V326 116 aa11.6□□□□□ -0.55
SMAD6-201ENST00000288840 GAGE2DQ9UEU5 116 aa11.6□□□□□ -0.55
SMAD6-201ENST00000288840 GCN1Q92616 2671 aaKnown RBP11.6□□□□□ -0.55
SMAD6-201ENST00000288840 TMEM243Q9BU79 118 aa11.59□□□□□ -0.55
SMAD6-201ENST00000288840 SPANXA1Q9NS26 97 aa11.59□□□□□ -0.55
SMAD6-201ENST00000288840 NXPH4O95158 308 aa11.59□□□□□ -0.55
SMAD6-201ENST00000288840 IGHV3-33P01772 117 aa11.59□□□□□ -0.55
SMAD6-201ENST00000288840 LINC01620Q4KN68 170 aa11.59□□□□□ -0.55
SMAD6-201ENST00000288840 LOC100131303A0A0U1RQF7 123 aa11.59□□□□□ -0.55
SMAD6-201ENST00000288840 TEX49A0A1B0GTD5 131 aa11.59□□□□□ -0.55
SMAD6-201ENST00000288840 M0QXV9 152 aa11.59□□□□□ -0.55
SMAD6-201ENST00000288840 C4orf3Q8WVX3 66 aa11.59□□□□□ -0.55
SMAD6-201ENST00000288840 ODF3Q96PU9 254 aa11.58□□□□□ -0.56
SMAD6-201ENST00000288840 UBE2D1P51668 147 aa11.58□□□□□ -0.56
SMAD6-201ENST00000288840 C6orf226Q5I0X4 101 aa11.58□□□□□ -0.56
SMAD6-201ENST00000288840 VSIG2Q96IQ7 327 aa11.58□□□□□ -0.56
SMAD6-201ENST00000288840 TMEM89A2RUT3 159 aa11.57□□□□□ -0.56
SMAD6-201ENST00000288840 ZFAND6Q6FIF0 208 aa11.57□□□□□ -0.56
SMAD6-201ENST00000288840 ZNF843Q8N446 348 aa11.57□□□□□ -0.56
SMAD6-201ENST00000288840 UBE2WQ96B02 151 aa11.57□□□□□ -0.56
SMAD6-201ENST00000288840 ICOSQ9Y6W8 199 aa11.57□□□□□ -0.56
SMAD6-201ENST00000288840 TRIAP1O43715 76 aa11.57□□□□□ -0.56
SMAD6-201ENST00000288840 CRLF1O75462 422 aa11.57□□□□□ -0.56
SMAD6-201ENST00000288840 MRPL23Q16540 153 aaKnown RBP11.57□□□□□ -0.56
SMAD6-201ENST00000288840 ADAMTSL4-AS1Q5T5F5 129 aa11.57□□□□□ -0.56
SMAD6-201ENST00000288840 POM121L12Q8N7R1 296 aa11.56□□□□□ -0.56
SMAD6-201ENST00000288840 RS1O15537 224 aa11.56□□□□□ -0.56
SMAD6-201ENST00000288840 ATRQ13535 2644 aa11.56□□□□□ -0.56
SMAD6-201ENST00000288840 XCL1P47992 114 aa11.56□□□□□ -0.56
SMAD6-201ENST00000288840 ODF3L2Q3SX64 289 aa11.56□□□□□ -0.56
SMAD6-201ENST00000288840 K7EQD1 137 aa11.55□□□□□ -0.56
SMAD6-201ENST00000288840 HERVK_113P63121 156 aa11.55□□□□□ -0.56
SMAD6-201ENST00000288840 LINC00694P0DN24 101 aa11.55□□□□□ -0.56
SMAD6-201ENST00000288840 IGLV10-54A0A075B6I4 117 aa11.54□□□□□ -0.56
SMAD6-201ENST00000288840 PIK3CD-AS1Q5SR53 167 aa11.54□□□□□ -0.56
SMAD6-201ENST00000288840 UBE2D4Q9Y2X8 147 aa11.54□□□□□ -0.56
SMAD6-201ENST00000288840 MXRA5Q9NR99 2828 aa11.54□□□□□ -0.56
SMAD6-201ENST00000288840 CRPP02741 224 aa11.53□□□□□ -0.56
SMAD6-201ENST00000288840 RPL32P62910 135 aaKnown RBP11.53□□□□□ -0.56
SMAD6-201ENST00000288840 RNF183Q96D59 192 aa11.53□□□□□ -0.56
SMAD6-201ENST00000288840 COX6A2Q02221 97 aa11.52□□□□□ -0.56
SMAD6-201ENST00000288840 SCGB1A1P11684 91 aa11.52□□□□□ -0.57
SMAD6-201ENST00000288840 SMCPP49901 116 aaPredicted RBP11.52□□□□□ -0.57
SMAD6-201ENST00000288840 KLK9Q2XQG4 91 aa11.52□□□□□ -0.57
SMAD6-201ENST00000288840 SMR3AQ99954 134 aa11.51□□□□□ -0.57
SMAD6-201ENST00000288840 C15orf53Q8NAA6 179 aa11.51□□□□□ -0.57
SMAD6-201ENST00000288840 XGP55808 180 aa11.51□□□□□ -0.57
SMAD6-201ENST00000288840 C1orf43Q9BWL3 253 aa11.51□□□□□ -0.57
SMAD6-201ENST00000288840 TINCRA0A1B0GVN0 87 aa11.5□□□□□ -0.57
SMAD6-201ENST00000288840 MIAQ16674 131 aa11.5□□□□□ -0.57
SMAD6-201ENST00000288840 CSMD2Q7Z408 3487 aa11.5□□□□□ -0.57
SMAD6-201ENST00000288840 CHCHD7Q9BUK0 85 aa11.5□□□□□ -0.57
SMAD6-201ENST00000288840 COPS9Q8WXC6 57 aa11.5□□□□□ -0.57
SMAD6-201ENST00000288840 TMEM263Q8WUH6 116 aaKnown RBP11.49□□□□□ -0.57
SMAD6-201ENST00000288840 BRI3O95415 125 aa11.49□□□□□ -0.57
SMAD6-201ENST00000288840 MALP21145 153 aa11.49□□□□□ -0.57
SMAD6-201ENST00000288840 C1orf158Q8N1D5 194 aa11.49□□□□□ -0.57
SMAD6-201ENST00000288840 DNAJC30Q96LL9 226 aa11.49□□□□□ -0.57
SMAD6-201ENST00000288840 Q9HAA7 133 aa11.49□□□□□ -0.57
SMAD6-201ENST00000288840 MRPS36P82909 103 aaKnown RBP11.48□□□□□ -0.57
SMAD6-201ENST00000288840 GAGE2AQ6NT46 116 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 190 ms