RNA–Protein interactions for RNA: ENST00000285116.7

SKA1-201, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SKA1, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-201ENST00000285116 A0A0J9YXV3 536 aa7.62□□□□□ -1.19
SKA1-201ENST00000285116 CCL19Q99731 98 aa7.62□□□□□ -1.19
SKA1-201ENST00000285116 C2CD3Q4AC94 2353 aa7.62□□□□□ -1.19
SKA1-201ENST00000285116 STAB1Q9NY15 2570 aa7.62□□□□□ -1.19
SKA1-201ENST00000285116 IGHV4-30-2A0A087WSY4 118 aa7.62□□□□□ -1.19
SKA1-201ENST00000285116 IGHV3-30-3P0DP02 117 aa7.62□□□□□ -1.19
SKA1-201ENST00000285116 TMEM101Q96IK0 257 aa7.62□□□□□ -1.19
SKA1-201ENST00000285116 CHCHD5Q9BSY4 110 aa7.62□□□□□ -1.19
SKA1-201ENST00000285116 SPANXDQ9BXN6 97 aa7.62□□□□□ -1.19
SKA1-201ENST00000285116 SPANXCQ9NY87 97 aa7.62□□□□□ -1.19
SKA1-201ENST00000285116 IGLV4-3A0A075B6K6 122 aa7.61□□□□□ -1.19
SKA1-201ENST00000285116 LST1O00453 97 aa7.61□□□□□ -1.19
SKA1-201ENST00000285116 PRSS2P07478 247 aa7.61□□□□□ -1.19
SKA1-201ENST00000285116 DSCR9P59020 149 aa7.61□□□□□ -1.19
SKA1-201ENST00000285116 COL6A5A8TX70 2615 aa7.61□□□□□ -1.19
SKA1-201ENST00000285116 DUX3Q96PT4 197 aa7.61□□□□□ -1.19
SKA1-201ENST00000285116 TIMM21Q9BVV7 248 aa7.61□□□□□ -1.19
SKA1-201ENST00000285116 IMUPQ9GZP8 106 aa7.61□□□□□ -1.19
SKA1-201ENST00000285116 VWFP04275 2813 aa7.61□□□□□ -1.19
SKA1-201ENST00000285116 B4DSR2 109 aa7.6□□□□□ -1.19
SKA1-201ENST00000285116 EDN2P20800 178 aa7.6□□□□□ -1.19
SKA1-201ENST00000285116 MRPS36P82909 103 aaKnown RBP7.6□□□□□ -1.19
SKA1-201ENST00000285116 FAM74A4Q5TZK3 123 aa7.6□□□□□ -1.19
SKA1-201ENST00000285116 LINC01587Q99440 93 aa7.6□□□□□ -1.19
SKA1-201ENST00000285116 ACYP1P07311 99 aa7.6□□□□□ -1.19
SKA1-201ENST00000285116 PLA2G2AP14555 144 aa7.6□□□□□ -1.19
SKA1-201ENST00000285116 LINC00467Q9BRT7 94 aa7.6□□□□□ -1.19
SKA1-201ENST00000285116 FBN1P35555 2871 aaKnown RBP7.6□□□□□ -1.19
SKA1-201ENST00000285116 MIAQ16674 131 aa7.59□□□□□ -1.19
SKA1-201ENST00000285116 SPXQ9BT56 116 aa7.59□□□□□ -1.19
SKA1-201ENST00000285116 NBEAL1Q6ZS30 2694 aa7.59□□□□□ -1.19
SKA1-201ENST00000285116 TRRAPQ9Y4A5 3859 aa7.59□□□□□ -1.19
SKA1-201ENST00000285116 IGKV3-7A0A075B6H7 116 aa7.59□□□□□ -1.19
SKA1-201ENST00000285116 CLEC2BQ92478 149 aa7.59□□□□□ -1.19
SKA1-201ENST00000285116 ADARB2-AS1A8MUL3 147 aa7.58□□□□□ -1.2
SKA1-201ENST00000285116 J3QLI3 93 aa7.58□□□□□ -1.2
SKA1-201ENST00000285116 FAM104AQ969W3 186 aa7.58□□□□□ -1.2
SKA1-201ENST00000285116 YAE1D1Q9NRH1 226 aa7.58□□□□□ -1.2
SKA1-201ENST00000285116 IGHV1-58A0A0C4DH39 117 aa7.58□□□□□ -1.2
SKA1-201ENST00000285116 ADAMTSL4-AS1Q5T5F5 129 aa7.58□□□□□ -1.2
SKA1-201ENST00000285116 NDUFA12Q9UI09 145 aa7.58□□□□□ -1.2
SKA1-201ENST00000285116 J3QKU1 62 aa7.58□□□□□ -1.2
SKA1-201ENST00000285116 TMEM61Q8N0U2 210 aa7.58□□□□□ -1.2
SKA1-201ENST00000285116 VPREB3Q9UKI3 123 aa7.58□□□□□ -1.2
SKA1-201ENST00000285116 WFDC11Q8NEX6 87 aa7.57□□□□□ -1.2
SKA1-201ENST00000285116 TIMM17BO60830 172 aa7.57□□□□□ -1.2
SKA1-201ENST00000285116 AVPP01185 164 aa7.57□□□□□ -1.2
SKA1-201ENST00000285116 FAM236AA0A1B0GUQ0 79 aa7.56□□□□□ -1.2
SKA1-201ENST00000285116 FAM236BA0A1B0GV22 79 aa7.56□□□□□ -1.2
SKA1-201ENST00000285116 TINCRA0A1B0GVN0 87 aa7.56□□□□□ -1.2
SKA1-201ENST00000285116 UBE2E2Q96LR5 201 aa7.56□□□□□ -1.2
SKA1-201ENST00000285116 TRAV12-2A0A075B6T6 113 aa7.56□□□□□ -1.2
SKA1-201ENST00000285116 TRAV8-3A0A0A6YYJ7 113 aa7.56□□□□□ -1.2
SKA1-201ENST00000285116 CD28P10747 220 aa7.56□□□□□ -1.2
SKA1-201ENST00000285116 SPINK13Q1W4C9 94 aa7.56□□□□□ -1.2
SKA1-201ENST00000285116 CYSRT1A8MQ03 144 aa7.55□□□□□ -1.2
SKA1-201ENST00000285116 DNAJC30Q96LL9 226 aa7.55□□□□□ -1.2
SKA1-201ENST00000285116 NBEAL2Q6ZNJ1 2754 aa7.55□□□□□ -1.2
SKA1-201ENST00000285116 NSD1Q96L73 2696 aaPredicted RBP7.55□□□□□ -1.2
SKA1-201ENST00000285116 FSHBP01225 129 aa7.55□□□□□ -1.2
SKA1-201ENST00000285116 Q6ZSV7 163 aa7.55□□□□□ -1.2
SKA1-201ENST00000285116 VSIG2Q96IQ7 327 aa7.55□□□□□ -1.2
SKA1-201ENST00000285116 IGHV4-59P01825 116 aa7.55□□□□□ -1.2
SKA1-201ENST00000285116 LINC00643Q86TS7 51 aa7.55□□□□□ -1.2
SKA1-201ENST00000285116 A0A096LNT2 108 aa7.54□□□□□ -1.2
SKA1-201ENST00000285116 ATP5G1P05496 136 aa7.54□□□□□ -1.2
SKA1-201ENST00000285116 DEFB112Q30KQ8 113 aa7.54□□□□□ -1.2
SKA1-201ENST00000285116 C3orf22Q8N5N4 141 aa7.54□□□□□ -1.2
SKA1-201ENST00000285116 C3orf56Q8N813 242 aa7.54□□□□□ -1.2
SKA1-201ENST00000285116 LINC01356Q8N9X3 169 aa7.54□□□□□ -1.2
SKA1-201ENST00000285116 PPDPFQ9H3Y8 114 aa7.54□□□□□ -1.2
SKA1-201ENST00000285116 RBMY1A1P0DJD3 496 aaKnown RBP7.54□□□□□ -1.2
SKA1-201ENST00000285116 RBMY1CP0DJD4 496 aa7.54□□□□□ -1.2
SKA1-201ENST00000285116 NPC2P61916 151 aa7.54□□□□□ -1.2
SKA1-201ENST00000285116 RBMY1FQ15415 496 aaKnown RBP7.54□□□□□ -1.2
SKA1-201ENST00000285116 C9orf153Q5TBE3 101 aa7.54□□□□□ -1.2
SKA1-201ENST00000285116 NOTCH1P46531 2555 aa7.53□□□□□ -1.2
SKA1-201ENST00000285116 IGLV5-45A0A087WSX0 123 aa7.53□□□□□ -1.2
SKA1-201ENST00000285116 UQCRQO14949 82 aa7.53□□□□□ -1.2
SKA1-201ENST00000285116 BEAN1Q3B7T3 259 aa7.53□□□□□ -1.2
SKA1-201ENST00000285116 CHCHD7Q9BUK0 85 aa7.53□□□□□ -1.2
SKA1-201ENST00000285116 NDUFA7O95182 113 aa7.53□□□□□ -1.2
SKA1-201ENST00000285116 HOXD3P31249 432 aaPredicted RBP7.53□□□□□ -1.2
SKA1-201ENST00000285116 SYNJ2BPP57105 145 aa7.53□□□□□ -1.2
SKA1-201ENST00000285116 ZNF415Q09FC8 603 aa7.52□□□□□ -1.21
SKA1-201ENST00000285116 FAM19A3Q7Z5A8 133 aa7.52□□□□□ -1.21
SKA1-201ENST00000285116 Q96MF0 132 aa7.52□□□□□ -1.21
SKA1-201ENST00000285116 ZNF702PQ9H963 129 aa7.52□□□□□ -1.21
SKA1-201ENST00000285116 UBE2D4Q9Y2X8 147 aa7.52□□□□□ -1.21
SKA1-201ENST00000285116 Q8N2B8 174 aa7.52□□□□□ -1.21
SKA1-201ENST00000285116 NACAE9PAV3 2078 aa7.52□□□□□ -1.21
SKA1-201ENST00000285116 TIRAPP58753 221 aa7.51□□□□□ -1.21
SKA1-201ENST00000285116 CEMP1Q6PRD7 247 aaPredicted RBP7.51□□□□□ -1.21
SKA1-201ENST00000285116 C11orf44Q8N8P7 122 aa7.51□□□□□ -1.21
SKA1-201ENST00000285116 LINC00526Q96FQ7 95 aa7.51□□□□□ -1.21
SKA1-201ENST00000285116 COX7A2LO14548 114 aa7.51□□□□□ -1.21
SKA1-201ENST00000285116 IGKV3-20P01619 116 aa7.51□□□□□ -1.21
SKA1-201ENST00000285116 IGHV3-53P01767 116 aa7.51□□□□□ -1.21
SKA1-201ENST00000285116 LINC00694P0DN24 101 aa7.51□□□□□ -1.21
SKA1-201ENST00000285116 C10orf99Q6UWK7 81 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms