RNA–Protein interactions for RNA: ENST00000278385.10

CD44-202, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-202ENST00000278385 CD3DP04234 171 aa2.98□□□□□ -1.93
CD44-202ENST00000278385 CRYGAP11844 174 aa2.98□□□□□ -1.93
CD44-202ENST00000278385 BLCAPP62952 87 aa2.98□□□□□ -1.93
CD44-202ENST00000278385 XAF1Q6GPH4 301 aa2.98□□□□□ -1.93
CD44-202ENST00000278385 NDUFA11Q86Y39 141 aa2.98□□□□□ -1.93
CD44-202ENST00000278385 DYNAPQ8N1N2 210 aa2.98□□□□□ -1.93
CD44-202ENST00000278385 TRAPPC1Q9Y5R8 145 aa2.98□□□□□ -1.93
CD44-202ENST00000278385 SMAD5-AS1Q9Y6J3 95 aa2.98□□□□□ -1.93
CD44-202ENST00000278385 ICOSQ9Y6W8 199 aa2.98□□□□□ -1.93
CD44-202ENST00000278385 U3KQK5 164 aa2.98□□□□□ -1.93
CD44-202ENST00000278385 ANK2Q01484 3957 aa2.98□□□□□ -1.93
CD44-202ENST00000278385 TMEM30CPA0ZSE6 113 aa2.97□□□□□ -1.93
CD44-202ENST00000278385 FAM168BA1KXE4 195 aa2.97□□□□□ -1.93
CD44-202ENST00000278385 TMEM262E9PQX1 116 aa2.97□□□□□ -1.93
CD44-202ENST00000278385 PMP2P02689 132 aa2.97□□□□□ -1.93
CD44-202ENST00000278385 TPT1P13693 172 aaKnown RBP2.97□□□□□ -1.93
CD44-202ENST00000278385 PIGYQ3MUY2 71 aa2.97□□□□□ -1.93
CD44-202ENST00000278385 HIGD2BQ4VC39 106 aa2.97□□□□□ -1.93
CD44-202ENST00000278385 C2orf83Q53S99 150 aa2.97□□□□□ -1.93
CD44-202ENST00000278385 KRTAP7-1Q8IUC3 87 aa2.97□□□□□ -1.93
CD44-202ENST00000278385 OR4X2Q8NGF9 303 aa2.97□□□□□ -1.93
CD44-202ENST00000278385 TYMSOSQ8TAI1 123 aa2.97□□□□□ -1.93
CD44-202ENST00000278385 SMDT1Q9H4I9 107 aa2.97□□□□□ -1.93
CD44-202ENST00000278385 MED9Q9NWA0 146 aa2.97□□□□□ -1.93
CD44-202ENST00000278385 TPRKBQ9Y3C4 175 aa2.97□□□□□ -1.93
CD44-202ENST00000278385 WNK2Q9Y3S1 2297 aa2.96□□□□□ -1.93
CD44-202ENST00000278385 PLXNB1O43157 2135 aa2.96□□□□□ -1.93
CD44-202ENST00000278385 IGKV1OR2-108A0A075B7D4 117 aa2.96□□□□□ -1.94
CD44-202ENST00000278385 IGHV3-73A0A0B4J1V6 119 aa2.96□□□□□ -1.94
CD44-202ENST00000278385 C7orf66A4D0T2 115 aa2.96□□□□□ -1.94
CD44-202ENST00000278385 A8MUU9 505 aa2.96□□□□□ -1.94
CD44-202ENST00000278385 SDCBPO00560 298 aaPredicted RBP2.96□□□□□ -1.94
CD44-202ENST00000278385 PIN1P1O15428 100 aa2.96□□□□□ -1.94
CD44-202ENST00000278385 YPEL1O60688 119 aa2.96□□□□□ -1.94
CD44-202ENST00000278385 IGLC1P0CG04 106 aa2.96□□□□□ -1.94
CD44-202ENST00000278385 CD24P25063 80 aa2.96□□□□□ -1.94
CD44-202ENST00000278385 SUPT4H1P63272 117 aaKnown RBP2.96□□□□□ -1.94
CD44-202ENST00000278385 MRPS36P82909 103 aaKnown RBP2.96□□□□□ -1.94
CD44-202ENST00000278385 ZNF816Q0VGE8 651 aaPredicted RBP2.96□□□□□ -1.94
CD44-202ENST00000278385 ZNF846Q147U1 533 aa2.96□□□□□ -1.94
CD44-202ENST00000278385 C2orf91Q6ZV80 131 aa2.96□□□□□ -1.94
CD44-202ENST00000278385 LYPD6Q86Y78 171 aa2.96□□□□□ -1.94
CD44-202ENST00000278385 SPANXA2-OT1Q8N9U9 137 aa2.96□□□□□ -1.94
CD44-202ENST00000278385 WFDC9Q8NEX5 89 aa2.96□□□□□ -1.94
CD44-202ENST00000278385 MUC7Q8TAX7 377 aa2.96□□□□□ -1.94
CD44-202ENST00000278385 LSM10Q969L4 123 aaKnown RBP2.96□□□□□ -1.94
CD44-202ENST00000278385 RAB37Q96AX2 223 aa2.96□□□□□ -1.94
CD44-202ENST00000278385 AQP10Q96PS8 301 aa2.96□□□□□ -1.94
CD44-202ENST00000278385 VAMP8Q9BV40 100 aa2.96□□□□□ -1.94
CD44-202ENST00000278385 CST11Q9H112 138 aa2.96□□□□□ -1.94
CD44-202ENST00000278385 STAB1Q9NY15 2570 aa2.96□□□□□ -1.94
CD44-202ENST00000278385 FBN3Q75N90 2809 aa2.95□□□□□ -1.94
CD44-202ENST00000278385 TCRBV4S1A1TA0A5B7 111 aa2.95□□□□□ -1.94
CD44-202ENST00000278385 M0R2P5 195 aa2.95□□□□□ -1.94
CD44-202ENST00000278385 TRACP01848 142 aa2.95□□□□□ -1.94
CD44-202ENST00000278385 SLC25A4P12235 298 aa2.95□□□□□ -1.94
CD44-202ENST00000278385 FABP4P15090 132 aa2.95□□□□□ -1.94
CD44-202ENST00000278385 XCL1P47992 114 aa2.95□□□□□ -1.94
CD44-202ENST00000278385 ZNF137PP52743 207 aa2.95□□□□□ -1.94
CD44-202ENST00000278385 KHDC3LQ587J8 217 aa2.95□□□□□ -1.94
CD44-202ENST00000278385 KPRPQ5T749 579 aaPredicted RBP2.95□□□□□ -1.94
CD44-202ENST00000278385 LYZL2Q7Z4W2 148 aa2.95□□□□□ -1.94
CD44-202ENST00000278385 C5orf56Q8N8D9 126 aa2.95□□□□□ -1.94
CD44-202ENST00000278385 Q8NDZ9 215 aa2.95□□□□□ -1.94
CD44-202ENST00000278385 LEAP2Q969E1 77 aa2.95□□□□□ -1.94
CD44-202ENST00000278385 IMMP2LQ96T52 175 aa2.95□□□□□ -1.94
CD44-202ENST00000278385 ABRACLQ9P1F3 81 aa2.95□□□□□ -1.94
CD44-202ENST00000278385 IGKV1D-37A0A075B6S9 117 aa2.94□□□□□ -1.94
CD44-202ENST00000278385 A0A0B4J2C4 111 aa2.94□□□□□ -1.94
CD44-202ENST00000278385 TMEM14DPA8MWL7 114 aa2.94□□□□□ -1.94
CD44-202ENST00000278385 MRPS14O60783 128 aaKnown RBP2.94□□□□□ -1.94
CD44-202ENST00000278385 HYPMO75409 117 aa2.94□□□□□ -1.94
CD44-202ENST00000278385 SAA1P0DJI8 122 aaPredicted RBP2.94□□□□□ -1.94
CD44-202ENST00000278385 NFYAP23511 347 aaPredicted RBP2.94□□□□□ -1.94
CD44-202ENST00000278385 FUSP35637 526 aaKnown RBP eCLIP2.94□□□□□ -1.94
CD44-202ENST00000278385 RPL28P46779 137 aaKnown RBP2.94□□□□□ -1.94
CD44-202ENST00000278385 Q8N6K4 173 aa2.94□□□□□ -1.94
CD44-202ENST00000278385 MXRA5Q9NR99 2828 aa2.94□□□□□ -1.94
CD44-202ENST00000278385 DOCK11Q5JSL3 2073 aa2.94□□□□□ -1.94
CD44-202ENST00000278385 TRRAPQ9Y4A5 3859 aa2.93□□□□□ -1.94
CD44-202ENST00000278385 TRBV6-6A0A0A6YYG2 114 aa2.93□□□□□ -1.94
CD44-202ENST00000278385 PDCD5O14737 125 aa2.93□□□□□ -1.94
CD44-202ENST00000278385 CREBL2O60519 120 aaPredicted RBP2.93□□□□□ -1.94
CD44-202ENST00000278385 TIMM17BO60830 172 aa2.93□□□□□ -1.94
CD44-202ENST00000278385 ZNF705BP0CI00 300 aaPredicted RBP2.93□□□□□ -1.94
CD44-202ENST00000278385 IL7P13232 177 aa2.93□□□□□ -1.94
CD44-202ENST00000278385 RPS10P46783 165 aaKnown RBP2.93□□□□□ -1.94
CD44-202ENST00000278385 INSL4Q14641 139 aa2.93□□□□□ -1.94
CD44-202ENST00000278385 SS18Q15532 418 aa2.93□□□□□ -1.94
CD44-202ENST00000278385 HMGN3Q15651 99 aa2.93□□□□□ -1.94
CD44-202ENST00000278385 C15orf32Q32M92 178 aa2.93□□□□□ -1.94
CD44-202ENST00000278385 MIC13Q5XKP0 118 aa2.93□□□□□ -1.94
CD44-202ENST00000278385 Q6ZQT7 251 aa2.93□□□□□ -1.94
CD44-202ENST00000278385 ZNF833PQ6ZTB9 187 aa2.93□□□□□ -1.94
CD44-202ENST00000278385 C6orf201Q7Z4U5 140 aa2.93□□□□□ -1.94
CD44-202ENST00000278385 UBALD1Q8TB05 177 aa2.93□□□□□ -1.94
CD44-202ENST00000278385 CLEC2BQ92478 149 aa2.93□□□□□ -1.94
CD44-202ENST00000278385 CHCHD1Q96BP2 118 aaKnown RBP2.93□□□□□ -1.94
CD44-202ENST00000278385 RNF5Q99942 180 aa2.93□□□□□ -1.94
CD44-202ENST00000278385 NABP2Q9BQ15 211 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms