RNA–Protein interactions for RNA: ENST00000273342.8

COL8A1-202, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 2 BASIC

Gene COL8A1, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-202ENST00000273342 Q8N2B8 174 aa9.4□□□□□ -0.9
COL8A1-202ENST00000273342 Q9H8V8 135 aa9.4□□□□□ -0.9
COL8A1-202ENST00000273342 FAM236AA0A1B0GUQ0 79 aa9.4□□□□□ -0.9
COL8A1-202ENST00000273342 FAM236BA0A1B0GV22 79 aa9.4□□□□□ -0.9
COL8A1-202ENST00000273342 RS1O15537 224 aa9.4□□□□□ -0.9
COL8A1-202ENST00000273342 CHD6Q8TD26 2715 aa9.4□□□□□ -0.91
COL8A1-202ENST00000273342 TRAV13-1A0A0B4J241 112 aa9.39□□□□□ -0.91
COL8A1-202ENST00000273342 UCNP55089 124 aa9.39□□□□□ -0.91
COL8A1-202ENST00000273342 CITED2Q99967 270 aaPredicted RBP9.39□□□□□ -0.91
COL8A1-202ENST00000273342 UBE2D4Q9Y2X8 147 aa9.39□□□□□ -0.91
COL8A1-202ENST00000273342 M0QXV9 152 aa9.39□□□□□ -0.91
COL8A1-202ENST00000273342 CFHR3Q02985 330 aa9.39□□□□□ -0.91
COL8A1-202ENST00000273342 CHCHD7Q9BUK0 85 aa9.39□□□□□ -0.91
COL8A1-202ENST00000273342 H3BT86 120 aa9.39□□□□□ -0.91
COL8A1-202ENST00000273342 TMEM101Q96IK0 257 aa9.39□□□□□ -0.91
COL8A1-202ENST00000273342 K7EMT4 169 aa9.38□□□□□ -0.91
COL8A1-202ENST00000273342 HOXD3P31249 432 aaPredicted RBP9.38□□□□□ -0.91
COL8A1-202ENST00000273342 SPANXDQ9BXN6 97 aa9.38□□□□□ -0.91
COL8A1-202ENST00000273342 SPANXCQ9NY87 97 aa9.38□□□□□ -0.91
COL8A1-202ENST00000273342 H3BUA1 57 aa9.38□□□□□ -0.91
COL8A1-202ENST00000273342 KHDC1LQ5JSQ8 128 aa9.38□□□□□ -0.91
COL8A1-202ENST00000273342 C18orf65Q6ZTR6 163 aa9.37□□□□□ -0.91
COL8A1-202ENST00000273342 TINCRA0A1B0GVN0 87 aa9.37□□□□□ -0.91
COL8A1-202ENST00000273342 IGHV3-53P01767 116 aa9.37□□□□□ -0.91
COL8A1-202ENST00000273342 PSMB8P28062 276 aa9.37□□□□□ -0.91
COL8A1-202ENST00000273342 PIMREGQ9BSJ6 248 aa9.37□□□□□ -0.91
COL8A1-202ENST00000273342 PYGO1Q9Y3Y4 419 aa9.37□□□□□ -0.91
COL8A1-202ENST00000273342 LINC01587Q99440 93 aa9.37□□□□□ -0.91
COL8A1-202ENST00000273342 Q6Q795 121 aa9.36□□□□□ -0.91
COL8A1-202ENST00000273342 Q9HAA7 133 aa9.36□□□□□ -0.91
COL8A1-202ENST00000273342 FN1P02751 2386 aaKnown RBP9.36□□□□□ -0.91
COL8A1-202ENST00000273342 DEFB112Q30KQ8 113 aa9.36□□□□□ -0.91
COL8A1-202ENST00000273342 PIK3CD-AS1Q5SR53 167 aa9.36□□□□□ -0.91
COL8A1-202ENST00000273342 LINC00308Q8TCZ7 52 aa9.36□□□□□ -0.91
COL8A1-202ENST00000273342 SMCR5Q8TEV8 140 aa9.36□□□□□ -0.91
COL8A1-202ENST00000273342 IGKV3OR2-268A0A0C4DH90 116 aa9.35□□□□□ -0.91
COL8A1-202ENST00000273342 SLURP1P55000 103 aa9.35□□□□□ -0.91
COL8A1-202ENST00000273342 C11orf44Q8N8P7 122 aa9.35□□□□□ -0.91
COL8A1-202ENST00000273342 PRB1P04280 392 aa9.35□□□□□ -0.91
COL8A1-202ENST00000273342 CIRBPQ14011 172 aaKnown RBP9.35□□□□□ -0.91
COL8A1-202ENST00000273342 SOSTDC1Q6X4U4 206 aa9.35□□□□□ -0.91
COL8A1-202ENST00000273342 YAE1D1Q9NRH1 226 aa9.35□□□□□ -0.91
COL8A1-202ENST00000273342 RBMY1BA6NDE4 496 aaKnown RBP9.34□□□□□ -0.91
COL8A1-202ENST00000273342 RBMY1EA6NEQ0 496 aaKnown RBP9.34□□□□□ -0.91
COL8A1-202ENST00000273342 RBMY1DP0C7P1 496 aaKnown RBP9.34□□□□□ -0.91
COL8A1-202ENST00000273342 LINC00694P0DN24 101 aa9.34□□□□□ -0.91
COL8A1-202ENST00000273342 DAZ2Q13117 558 aaKnown RBP9.34□□□□□ -0.91
COL8A1-202ENST00000273342 DAZ4Q86SG3 579 aaKnown RBP9.34□□□□□ -0.91
COL8A1-202ENST00000273342 DAZ3Q9NR90 486 aaKnown RBP9.34□□□□□ -0.91
COL8A1-202ENST00000273342 PRIMA1Q86XR5 153 aa9.34□□□□□ -0.91
COL8A1-202ENST00000273342 BRI3O95415 125 aa9.34□□□□□ -0.91
COL8A1-202ENST00000273342 MSMBP08118 114 aa9.34□□□□□ -0.91
COL8A1-202ENST00000273342 UBE2E2Q96LR5 201 aa9.33□□□□□ -0.92
COL8A1-202ENST00000273342 XCL2Q9UBD3 114 aa9.33□□□□□ -0.92
COL8A1-202ENST00000273342 BAALC-AS2P0C853 105 aa9.32□□□□□ -0.92
COL8A1-202ENST00000273342 GAGE2AQ6NT46 116 aa9.32□□□□□ -0.92
COL8A1-202ENST00000273342 FAM218AQ96MZ4 157 aa9.32□□□□□ -0.92
COL8A1-202ENST00000273342 SPANXA1Q9NS26 97 aa9.32□□□□□ -0.92
COL8A1-202ENST00000273342 C10orf105Q8TEF2 133 aa9.32□□□□□ -0.92
COL8A1-202ENST00000273342 KLK5Q9Y337 293 aaPredicted RBP9.32□□□□□ -0.92
COL8A1-202ENST00000273342 LINC00242Q5T6M2 205 aa9.31□□□□□ -0.92
COL8A1-202ENST00000273342 NDUFA1O15239 70 aa9.31□□□□□ -0.92
COL8A1-202ENST00000273342 TOMM7Q9P0U1 55 aa9.31□□□□□ -0.92
COL8A1-202ENST00000273342 COX7A2LO14548 114 aa9.3□□□□□ -0.92
COL8A1-202ENST00000273342 ZNF415Q09FC8 603 aa9.29□□□□□ -0.92
COL8A1-202ENST00000273342 C9orf153Q5TBE3 101 aa9.29□□□□□ -0.92
COL8A1-202ENST00000273342 PPDPFQ9H3Y8 114 aa9.29□□□□□ -0.92
COL8A1-202ENST00000273342 TRGV1A0A0A0MS02 117 aa9.29□□□□□ -0.92
COL8A1-202ENST00000273342 FAM110AQ9BQ89 295 aa9.29□□□□□ -0.92
COL8A1-202ENST00000273342 FAM240AA0A1B0GVK7 77 aa9.28□□□□□ -0.92
COL8A1-202ENST00000273342 TIRAPP58753 221 aa9.28□□□□□ -0.92
COL8A1-202ENST00000273342 LINC01600Q96MT4 127 aa9.28□□□□□ -0.92
COL8A1-202ENST00000273342 TRBV7-7A0A0K0K1E9 115 aa9.27□□□□□ -0.93
COL8A1-202ENST00000273342 SMIM1B2RUZ4 78 aa9.27□□□□□ -0.93
COL8A1-202ENST00000273342 MRPL23Q16540 153 aaKnown RBP9.27□□□□□ -0.93
COL8A1-202ENST00000273342 LOC107984640A0A0U1RRK4 108 aa9.26□□□□□ -0.93
COL8A1-202ENST00000273342 DEFB121Q5J5C9 76 aa9.26□□□□□ -0.93
COL8A1-202ENST00000273342 ATP5G1P05496 136 aa9.26□□□□□ -0.93
COL8A1-202ENST00000273342 C9orf129Q5T035 196 aaKnown RBP9.26□□□□□ -0.93
COL8A1-202ENST00000273342 AKAP9Q99996 3911 aa9.26□□□□□ -0.93
COL8A1-202ENST00000273342 HERVK_113P63121 156 aa9.25□□□□□ -0.93
COL8A1-202ENST00000273342 SDIM1Q6ZPB5 146 aa9.25□□□□□ -0.93
COL8A1-202ENST00000273342 TIMM17BO60830 172 aa9.25□□□□□ -0.93
COL8A1-202ENST00000273342 C11orf68Q9H3H3 251 aaKnown RBP9.25□□□□□ -0.93
COL8A1-202ENST00000273342 IGKV3D-7A0A0C4DH55 119 aa9.24□□□□□ -0.93
COL8A1-202ENST00000273342 A0A1W2PRX2 142 aa9.24□□□□□ -0.93
COL8A1-202ENST00000273342 B4DSR2 109 aa9.24□□□□□ -0.93
COL8A1-202ENST00000273342 NBEAL2Q6ZNJ1 2754 aa9.24□□□□□ -0.93
COL8A1-202ENST00000273342 C11orf72Q8NBR9 251 aa9.24□□□□□ -0.93
COL8A1-202ENST00000273342 Q96MF0 132 aa9.24□□□□□ -0.93
COL8A1-202ENST00000273342 EDA2RQ9HAV5 297 aa9.24□□□□□ -0.93
COL8A1-202ENST00000273342 NTM-AS1Q6ZSK4 140 aa9.24□□□□□ -0.93
COL8A1-202ENST00000273342 C14orf132Q9NPU4 83 aa9.24□□□□□ -0.93
COL8A1-202ENST00000273342 HIVEP2P31629 2446 aa9.24□□□□□ -0.93
COL8A1-202ENST00000273342 DYNLRB2Q8TF09 96 aa9.23□□□□□ -0.93
COL8A1-202ENST00000273342 C22orf24Q9Y442 160 aa9.23□□□□□ -0.93
COL8A1-202ENST00000273342 TMEM89A2RUT3 159 aa9.23□□□□□ -0.93
COL8A1-202ENST00000273342 Q6ZTI0 123 aa9.23□□□□□ -0.93
COL8A1-202ENST00000273342 LINC00643Q86TS7 51 aa9.23□□□□□ -0.93
COL8A1-202ENST00000273342 MIR7-3HGQ8N6C7 128 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms