RNA–Protein interactions for RNA: ENST00000262829.11

RBFOX2-201, Transcript of RNA binding fox-1 homolog 2, humanhuman

TSL 1 (best) BASIC

Gene RBFOX2, Length 1,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX2-201ENST00000262829 C14orf177Q52M58 125 aa9.42□□□□□ -0.9
RBFOX2-201ENST00000262829 CIRBP-AS1Q8TBR5 109 aa9.42□□□□□ -0.9
RBFOX2-201ENST00000262829 CHAC1Q9BUX1 264 aa9.42□□□□□ -0.9
RBFOX2-201ENST00000262829 A0A0U1RRA0 63 aa9.41□□□□□ -0.9
RBFOX2-201ENST00000262829 A0A1B0GUV1 79 aa9.41□□□□□ -0.9
RBFOX2-201ENST00000262829 SDHAF1A6NFY7 115 aa9.41□□□□□ -0.9
RBFOX2-201ENST00000262829 S100A1P23297 94 aa9.41□□□□□ -0.9
RBFOX2-201ENST00000262829 TSKUQ8WUA8 353 aa9.41□□□□□ -0.9
RBFOX2-201ENST00000262829 GEMIN7Q9H840 131 aaKnown RBP9.41□□□□□ -0.9
RBFOX2-201ENST00000262829 A0A1B0GUT8 65 aa9.41□□□□□ -0.9
RBFOX2-201ENST00000262829 RPS10P46783 165 aaKnown RBP9.41□□□□□ -0.9
RBFOX2-201ENST00000262829 RNASEKQ6P5S7 137 aaKnown RBP9.41□□□□□ -0.9
RBFOX2-201ENST00000262829 BORCS7Q96B45 105 aa9.41□□□□□ -0.9
RBFOX2-201ENST00000262829 V9GYV3 84 aa9.41□□□□□ -0.9
RBFOX2-201ENST00000262829 hDV102S1A0JD36 115 aa9.4□□□□□ -0.91
RBFOX2-201ENST00000262829 SMKR1H3BMG3 65 aa9.4□□□□□ -0.91
RBFOX2-201ENST00000262829 TMEM241Q24JQ0 296 aa9.4□□□□□ -0.91
RBFOX2-201ENST00000262829 RNF185Q96GF1 192 aa9.4□□□□□ -0.91
RBFOX2-201ENST00000262829 OSTCQ9NRP0 149 aa9.4□□□□□ -0.91
RBFOX2-201ENST00000262829 LINC00862A6NCI5 91 aa9.39□□□□□ -0.91
RBFOX2-201ENST00000262829 PANO1I0J062 215 aa9.39□□□□□ -0.91
RBFOX2-201ENST00000262829 NCR2O95944 276 aa9.39□□□□□ -0.91
RBFOX2-201ENST00000262829 APCSP02743 223 aa9.39□□□□□ -0.91
RBFOX2-201ENST00000262829 VPREB1P12018 145 aa9.39□□□□□ -0.91
RBFOX2-201ENST00000262829 PMCHP20382 165 aa9.39□□□□□ -0.91
RBFOX2-201ENST00000262829 RPL23P62829 140 aaKnown RBP9.39□□□□□ -0.91
RBFOX2-201ENST00000262829 ADIRFQ15847 76 aa9.39□□□□□ -0.91
RBFOX2-201ENST00000262829 AMMECR1LQ6DCA0 310 aa9.39□□□□□ -0.91
RBFOX2-201ENST00000262829 AMN1Q8IY45 258 aa9.39□□□□□ -0.91
RBFOX2-201ENST00000262829 NUP35Q8NFH5 326 aa9.39□□□□□ -0.91
RBFOX2-201ENST00000262829 ISOC2Q96AB3 205 aa9.39□□□□□ -0.91
RBFOX2-201ENST00000262829 FAM231BA6NCW3 169 aa9.38□□□□□ -0.91
RBFOX2-201ENST00000262829 GAGE12HA6NDE8 117 aa9.38□□□□□ -0.91
RBFOX2-201ENST00000262829 RAB4AP20338 218 aa9.38□□□□□ -0.91
RBFOX2-201ENST00000262829 TMEM242Q9NWH2 141 aa9.38□□□□□ -0.91
RBFOX2-201ENST00000262829 TRAV8-4A0A0B4J246 113 aa9.37□□□□□ -0.91
RBFOX2-201ENST00000262829 TSHBP01222 138 aa9.37□□□□□ -0.91
RBFOX2-201ENST00000262829 SLPIP03973 132 aa9.37□□□□□ -0.91
RBFOX2-201ENST00000262829 PLA2G1BP04054 148 aaKnown RBP9.37□□□□□ -0.91
RBFOX2-201ENST00000262829 FGF6P10767 208 aa9.37□□□□□ -0.91
RBFOX2-201ENST00000262829 TMEM191AQ9H0A3 160 aa9.37□□□□□ -0.91
RBFOX2-201ENST00000262829 ST20Q9HBF5 79 aa9.37□□□□□ -0.91
RBFOX2-201ENST00000262829 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.37□□□□□ -0.91
RBFOX2-201ENST00000262829 I3L3M4 83 aa9.36□□□□□ -0.91
RBFOX2-201ENST00000262829 C9orf163Q8N9P6 203 aa9.36□□□□□ -0.91
RBFOX2-201ENST00000262829 CHCHD10Q8WYQ3 142 aaPredicted RBP9.36□□□□□ -0.91
RBFOX2-201ENST00000262829 TRBV6-5A0A0K0K1A5 114 aa9.35□□□□□ -0.91
RBFOX2-201ENST00000262829 HIGD2BQ4VC39 106 aa9.35□□□□□ -0.91
RBFOX2-201ENST00000262829 SDIM1Q6ZPB5 146 aa9.35□□□□□ -0.91
RBFOX2-201ENST00000262829 NAT8Q9UHE5 227 aa9.35□□□□□ -0.91
RBFOX2-201ENST00000262829 RIGQ13278 110 aa9.34□□□□□ -0.91
RBFOX2-201ENST00000262829 FAM74A3Q4VXF1 159 aa9.34□□□□□ -0.91
RBFOX2-201ENST00000262829 C15orf56Q8N910 161 aa9.34□□□□□ -0.91
RBFOX2-201ENST00000262829 PCP4L1A6NKN8 68 aa9.33□□□□□ -0.92
RBFOX2-201ENST00000262829 CHTF8P0CG12 524 aa9.33□□□□□ -0.92
RBFOX2-201ENST00000262829 KRTAP10-4P60372 401 aaPredicted RBP9.33□□□□□ -0.92
RBFOX2-201ENST00000262829 PEA15Q15121 130 aa9.33□□□□□ -0.92
RBFOX2-201ENST00000262829 NAT8BQ9UHF3 227 aa9.33□□□□□ -0.92
RBFOX2-201ENST00000262829 ESDP10768 282 aa9.32□□□□□ -0.92
RBFOX2-201ENST00000262829 XCL1P47992 114 aa9.32□□□□□ -0.92
RBFOX2-201ENST00000262829 POLR2KP53803 58 aaKnown RBP9.32□□□□□ -0.92
RBFOX2-201ENST00000262829 MRAP2Q96G30 205 aa9.32□□□□□ -0.92
RBFOX2-201ENST00000262829 LRP1Q07954 4544 aaKnown RBP9.32□□□□□ -0.92
RBFOX2-201ENST00000262829 SMIM27A0A1W2PRY6 76 aa9.31□□□□□ -0.92
RBFOX2-201ENST00000262829 CNBPP62633 177 aaKnown RBP9.31□□□□□ -0.92
RBFOX2-201ENST00000262829 MRPL51Q4U2R6 128 aaKnown RBP9.31□□□□□ -0.92
RBFOX2-201ENST00000262829 NRACQ8N912 160 aa9.31□□□□□ -0.92
RBFOX2-201ENST00000262829 TRBV27A0A0K0K1C4 114 aa9.31□□□□□ -0.92
RBFOX2-201ENST00000262829 H7C423 109 aa9.31□□□□□ -0.92
RBFOX2-201ENST00000262829 SEC61GP60059 68 aa9.31□□□□□ -0.92
RBFOX2-201ENST00000262829 RNASE13Q5GAN3 156 aaKnown RBP9.31□□□□□ -0.92
RBFOX2-201ENST00000262829 MRPL54Q6P161 138 aaKnown RBP9.31□□□□□ -0.92
RBFOX2-201ENST00000262829 OR5A1Q8NGJ0 315 aa9.31□□□□□ -0.92
RBFOX2-201ENST00000262829 LINC00526Q96FQ7 95 aa9.31□□□□□ -0.92
RBFOX2-201ENST00000262829 DPH3Q96FX2 82 aa9.31□□□□□ -0.92
RBFOX2-201ENST00000262829 TMEM101Q96IK0 257 aa9.31□□□□□ -0.92
RBFOX2-201ENST00000262829 BTF3L4Q96K17 158 aa9.31□□□□□ -0.92
RBFOX2-201ENST00000262829 CCL25O15444 150 aa9.3□□□□□ -0.92
RBFOX2-201ENST00000262829 FOXI1Q12951 378 aa9.3□□□□□ -0.92
RBFOX2-201ENST00000262829 IGHV3-64A0A075B6Q5 118 aa9.29□□□□□ -0.92
RBFOX2-201ENST00000262829 LINC00959A0A1B0GUT2 108 aa9.29□□□□□ -0.92
RBFOX2-201ENST00000262829 FCER1GP30273 86 aa9.29□□□□□ -0.92
RBFOX2-201ENST00000262829 FAM104BQ5XKR9 115 aa9.29□□□□□ -0.92
RBFOX2-201ENST00000262829 COMMD7Q86VX2 200 aa9.29□□□□□ -0.92
RBFOX2-201ENST00000262829 VCYO14598 125 aa9.28□□□□□ -0.92
RBFOX2-201ENST00000262829 ZNF25P17030 456 aaPredicted RBP9.28□□□□□ -0.92
RBFOX2-201ENST00000262829 HNRNPA3P51991 378 aaKnown RBP9.28□□□□□ -0.92
RBFOX2-201ENST00000262829 SUMO2P61956 95 aaKnown RBP9.28□□□□□ -0.92
RBFOX2-201ENST00000262829 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.27□□□□□ -0.93
RBFOX2-201ENST00000262829 C7orf77A4D0Y5 90 aa9.27□□□□□ -0.93
RBFOX2-201ENST00000262829 H3BS24 57 aa9.27□□□□□ -0.93
RBFOX2-201ENST00000262829 RPL37AP61513 92 aaKnown RBP9.27□□□□□ -0.93
RBFOX2-201ENST00000262829 COX6A2Q02221 97 aa9.27□□□□□ -0.93
RBFOX2-201ENST00000262829 UQCC3Q6UW78 93 aa9.27□□□□□ -0.93
RBFOX2-201ENST00000262829 ZNF664Q8N3J9 261 aa9.27□□□□□ -0.93
RBFOX2-201ENST00000262829 CDC42SE2Q9NRR3 84 aa9.27□□□□□ -0.93
RBFOX2-201ENST00000262829 CKS2P33552 79 aa9.26□□□□□ -0.93
RBFOX2-201ENST00000262829 LCE1DQ5T752 114 aa9.26□□□□□ -0.93
RBFOX2-201ENST00000262829 PRSS3P2Q8NHM4 247 aa9.26□□□□□ -0.93
RBFOX2-201ENST00000262829 KRTAP4-7Q9BYR0 210 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms