RNA–Protein interactions for RNA: ENST00000258962.4

SRSF1-201, Transcript of serine and arginine rich splicing factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-201ENST00000258962 ATP5G1P05496 136 aa12.18□□□□□ -0.46
SRSF1-201ENST00000258962 CTAG1AP78358 180 aa12.18□□□□□ -0.46
SRSF1-201ENST00000258962 IGLV4-3A0A075B6K6 122 aa12.17□□□□□ -0.46
SRSF1-201ENST00000258962 TEX48A0A1B0GUV7 120 aa12.17□□□□□ -0.46
SRSF1-201ENST00000258962 STPG4Q8N801 248 aa12.17□□□□□ -0.46
SRSF1-201ENST00000258962 UBE2D4Q9Y2X8 147 aa12.17□□□□□ -0.46
SRSF1-201ENST00000258962 DNAH7Q8WXX0 4024 aa12.17□□□□□ -0.46
SRSF1-201ENST00000258962 SIVA1O15304 175 aa12.16□□□□□ -0.46
SRSF1-201ENST00000258962 GYPEP15421 78 aa12.16□□□□□ -0.46
SRSF1-201ENST00000258962 C12orf74Q32Q52 190 aa12.16□□□□□ -0.46
SRSF1-201ENST00000258962 ANKRD39Q53RE8 183 aa12.16□□□□□ -0.46
SRSF1-201ENST00000258962 CEMP1Q6PRD7 247 aaPredicted RBP12.16□□□□□ -0.46
SRSF1-201ENST00000258962 VSIG2Q96IQ7 327 aa12.16□□□□□ -0.46
SRSF1-201ENST00000258962 GTSF1LQ9H1H1 148 aa12.16□□□□□ -0.46
SRSF1-201ENST00000258962 SPANXA1Q9NS26 97 aa12.16□□□□□ -0.46
SRSF1-201ENST00000258962 KLK5Q9Y337 293 aaPredicted RBP12.16□□□□□ -0.46
SRSF1-201ENST00000258962 C2orf88Q9BSF0 95 aa12.16□□□□□ -0.46
SRSF1-201ENST00000258962 VCX2Q9H322 139 aa12.16□□□□□ -0.46
SRSF1-201ENST00000258962 CST9LQ9H4G1 147 aa12.16□□□□□ -0.46
SRSF1-201ENST00000258962 PAX4O43316 350 aa12.15□□□□□ -0.46
SRSF1-201ENST00000258962 HERVK_113P61574 105 aa12.14□□□□□ -0.47
SRSF1-201ENST00000258962 TMEM97Q5BJF2 176 aa12.14□□□□□ -0.47
SRSF1-201ENST00000258962 BOD1L2Q8IYS8 172 aa12.14□□□□□ -0.47
SRSF1-201ENST00000258962 SNHG12Q9BXW3 62 aa12.14□□□□□ -0.47
SRSF1-201ENST00000258962 IGLV4-69A0A075B6H9 119 aa12.13□□□□□ -0.47
SRSF1-201ENST00000258962 A0A0J9YY99 117 aa12.13□□□□□ -0.47
SRSF1-201ENST00000258962 HTN3P15516 51 aa12.13□□□□□ -0.47
SRSF1-201ENST00000258962 NMUP48645 174 aa12.13□□□□□ -0.47
SRSF1-201ENST00000258962 TIMM21Q9BVV7 248 aa12.13□□□□□ -0.47
SRSF1-201ENST00000258962 TRAV26-1A0A087WT03 109 aa12.12□□□□□ -0.47
SRSF1-201ENST00000258962 F5H768 121 aa12.12□□□□□ -0.47
SRSF1-201ENST00000258962 ATP6V0E2Q8NHE4 81 aa12.12□□□□□ -0.47
SRSF1-201ENST00000258962 Q6ZUT4 128 aa12.11□□□□□ -0.47
SRSF1-201ENST00000258962 AMELXQ99217 191 aa12.11□□□□□ -0.47
SRSF1-201ENST00000258962 TMEM243Q9BU79 118 aa12.11□□□□□ -0.47
SRSF1-201ENST00000258962 TRBV25-1A0A075B6N4 114 aa12.11□□□□□ -0.47
SRSF1-201ENST00000258962 TRBV6-8A0A0A6YYG3 113 aa12.11□□□□□ -0.47
SRSF1-201ENST00000258962 Q6ZTC4 211 aa12.11□□□□□ -0.47
SRSF1-201ENST00000258962 TENM2Q9NT68 2774 aa12.1□□□□□ -0.47
SRSF1-201ENST00000258962 FGF6P10767 208 aa12.1□□□□□ -0.47
SRSF1-201ENST00000258962 TCTAP57738 103 aa12.1□□□□□ -0.47
SRSF1-201ENST00000258962 RNASE13Q5GAN3 156 aaKnown RBP12.1□□□□□ -0.47
SRSF1-201ENST00000258962 COL5A1-AS1Q5SY13 56 aa12.1□□□□□ -0.47
SRSF1-201ENST00000258962 DGAT2L7PQ6IED9 249 aa12.1□□□□□ -0.47
SRSF1-201ENST00000258962 TP73-AS1Q9UF72 201 aa12.1□□□□□ -0.47
SRSF1-201ENST00000258962 TRAV10A0A0B4J240 114 aa12.09□□□□□ -0.47
SRSF1-201ENST00000258962 C11orf86A6NJI1 115 aa12.09□□□□□ -0.47
SRSF1-201ENST00000258962 H7C423 109 aa12.09□□□□□ -0.47
SRSF1-201ENST00000258962 MRPS36P82909 103 aaKnown RBP12.09□□□□□ -0.47
SRSF1-201ENST00000258962 NFE4Q86UQ8 179 aa12.09□□□□□ -0.47
SRSF1-201ENST00000258962 A0A096LPF7 62 aa12.08□□□□□ -0.48
SRSF1-201ENST00000258962 EREGO14944 169 aa12.08□□□□□ -0.48
SRSF1-201ENST00000258962 LCE6AA0A183 80 aa12.07□□□□□ -0.48
SRSF1-201ENST00000258962 E9PLD3 99 aa12.07□□□□□ -0.48
SRSF1-201ENST00000258962 BATFQ16520 125 aa12.07□□□□□ -0.48
SRSF1-201ENST00000258962 HIGD1BQ9P298 99 aa12.07□□□□□ -0.48
SRSF1-201ENST00000258962 CSDC2Q9Y534 153 aaKnown RBP12.07□□□□□ -0.48
SRSF1-201ENST00000258962 DEFB131BA0A096LNP1 70 aa12.06□□□□□ -0.48
SRSF1-201ENST00000258962 IGKV2D-26A0A0A0MRZ7 120 aa12.06□□□□□ -0.48
SRSF1-201ENST00000258962 CSMD3Q7Z407 3707 aa12.06□□□□□ -0.48
SRSF1-201ENST00000258962 IGLL5B9A064 214 aa12.06□□□□□ -0.48
SRSF1-201ENST00000258962 UBE2L6O14933 153 aa12.06□□□□□ -0.48
SRSF1-201ENST00000258962 A0A0J9YXV3 536 aa12.05□□□□□ -0.48
SRSF1-201ENST00000258962 HINT1P49773 126 aaPredicted RBP12.05□□□□□ -0.48
SRSF1-201ENST00000258962 GAGE6Q13070 117 aa12.05□□□□□ -0.48
SRSF1-201ENST00000258962 TMEM170BQ5T4T1 132 aa12.05□□□□□ -0.48
SRSF1-201ENST00000258962 PCP2Q8IVA1 136 aa12.05□□□□□ -0.48
SRSF1-201ENST00000258962 CHAC1Q9BUX1 264 aa12.05□□□□□ -0.48
SRSF1-201ENST00000258962 HSD52Q0P140 79 aa12.04□□□□□ -0.48
SRSF1-201ENST00000258962 MRPL23Q16540 153 aaKnown RBP12.04□□□□□ -0.48
SRSF1-201ENST00000258962 AMMECR1LQ6DCA0 310 aa12.04□□□□□ -0.48
SRSF1-201ENST00000258962 C2orf91Q6ZV80 131 aa12.04□□□□□ -0.48
SRSF1-201ENST00000258962 TMEM101Q96IK0 257 aa12.04□□□□□ -0.48
SRSF1-201ENST00000258962 CHCHD5Q9BSY4 110 aa12.04□□□□□ -0.48
SRSF1-201ENST00000258962 CDC42SE2Q9NRR3 84 aa12.04□□□□□ -0.48
SRSF1-201ENST00000258962 ICOSQ9Y6W8 199 aa12.04□□□□□ -0.48
SRSF1-201ENST00000258962 TRAV8-6A0A0B4J262 113 aa12.03□□□□□ -0.48
SRSF1-201ENST00000258962 SEC11AP67812 179 aa12.03□□□□□ -0.48
SRSF1-201ENST00000258962 MPV17L2Q567V2 206 aa12.03□□□□□ -0.48
SRSF1-201ENST00000258962 OR5A1Q8NGJ0 315 aa12.03□□□□□ -0.48
SRSF1-201ENST00000258962 STARD9Q9P2P6 4700 aa12.03□□□□□ -0.48
SRSF1-201ENST00000258962 ZNF25P17030 456 aaPredicted RBP12.02□□□□□ -0.48
SRSF1-201ENST00000258962 UBE2D1P51668 147 aa12.02□□□□□ -0.48
SRSF1-201ENST00000258962 MYMXA0A1B0GTQ4 84 aa12.01□□□□□ -0.49
SRSF1-201ENST00000258962 TINCRA0A1B0GVN0 87 aa12.01□□□□□ -0.49
SRSF1-201ENST00000258962 H3BNG1 76 aa12.01□□□□□ -0.49
SRSF1-201ENST00000258962 ZNF22P17026 224 aaPredicted RBP12.01□□□□□ -0.49
SRSF1-201ENST00000258962 IGLV4-60A0A075B6I1 120 aa12.01□□□□□ -0.49
SRSF1-201ENST00000258962 TAL2Q16559 108 aa12.01□□□□□ -0.49
SRSF1-201ENST00000258962 TTTY13Q9BZ97 58 aa12.01□□□□□ -0.49
SRSF1-201ENST00000258962 KMT2CQ8NEZ4 4911 aaKnown RBP12□□□□□ -0.49
SRSF1-201ENST00000258962 LY6G6CO95867 125 aa12□□□□□ -0.49
SRSF1-201ENST00000258962 BVES-AS1Q5T3Y7 98 aa12□□□□□ -0.49
SRSF1-201ENST00000258962 SH2D6Q7Z4S9 175 aa12□□□□□ -0.49
SRSF1-201ENST00000258962 PLEKHB2Q96CS7 222 aa12□□□□□ -0.49
SRSF1-201ENST00000258962 LINC00476Q8WZB0 136 aa11.99□□□□□ -0.49
SRSF1-201ENST00000258962 GEMIN7Q9H840 131 aaKnown RBP11.99□□□□□ -0.49
SRSF1-201ENST00000258962 TMEM223A0PJW6 202 aa11.98□□□□□ -0.49
SRSF1-201ENST00000258962 A6NDN8 102 aa11.98□□□□□ -0.49
SRSF1-201ENST00000258962 LEPROTO15243 131 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms