RNA–Protein interactions for RNA: ENST00000257552.6

MSI1-201, Transcript of musashi RNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSI1, Length 2,975 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1-201ENST00000257552 USMG5Q96IX5 58 aa10.8□□□□□ -0.68
MSI1-201ENST00000257552 LINC01587Q99440 93 aa10.79□□□□□ -0.68
MSI1-201ENST00000257552 MRPL23Q16540 153 aaKnown RBP10.79□□□□□ -0.68
MSI1-201ENST00000257552 PPDPFQ9H3Y8 114 aa10.79□□□□□ -0.68
MSI1-201ENST00000257552 FLNAP21333 2647 aaKnown RBP10.79□□□□□ -0.68
MSI1-201ENST00000257552 ITPR3Q14573 2671 aa10.79□□□□□ -0.68
MSI1-201ENST00000257552 ITPR2Q14571 2701 aa10.78□□□□□ -0.68
MSI1-201ENST00000257552 IGHV3-38A0A0C4DH36 116 aa10.78□□□□□ -0.68
MSI1-201ENST00000257552 FAM240AA0A1B0GVK7 77 aa10.78□□□□□ -0.68
MSI1-201ENST00000257552 DEFB112Q30KQ8 113 aa10.78□□□□□ -0.68
MSI1-201ENST00000257552 TNFRSF18Q9Y5U5 241 aa10.77□□□□□ -0.68
MSI1-201ENST00000257552 TRBV7-7A0A0K0K1E9 115 aa10.77□□□□□ -0.69
MSI1-201ENST00000257552 HIST2H2BCQ6DN03 193 aa10.77□□□□□ -0.69
MSI1-201ENST00000257552 CITED2Q99967 270 aaPredicted RBP10.77□□□□□ -0.69
MSI1-201ENST00000257552 IGHG2P01859 326 aa10.76□□□□□ -0.69
MSI1-201ENST00000257552 SMCR5Q8TEV8 140 aa10.76□□□□□ -0.69
MSI1-201ENST00000257552 CDKN2A-AS1Q9UH64 79 aa10.76□□□□□ -0.69
MSI1-201ENST00000257552 A6NDX4 124 aa10.76□□□□□ -0.69
MSI1-201ENST00000257552 DEFB121Q5J5C9 76 aa10.76□□□□□ -0.69
MSI1-201ENST00000257552 YAE1D1Q9NRH1 226 aa10.76□□□□□ -0.69
MSI1-201ENST00000257552 PYGO1Q9Y3Y4 419 aa10.75□□□□□ -0.69
MSI1-201ENST00000257552 WNK1Q9H4A3 2382 aa10.75□□□□□ -0.69
MSI1-201ENST00000257552 HIST2H2BDQ6DRA6 164 aa10.75□□□□□ -0.69
MSI1-201ENST00000257552 NIPBLQ6KC79 2804 aaeCLIP10.74□□□□□ -0.69
MSI1-201ENST00000257552 SNRPD3P62318 126 aaKnown RBP10.74□□□□□ -0.69
MSI1-201ENST00000257552 C9orf153Q5TBE3 101 aa10.74□□□□□ -0.69
MSI1-201ENST00000257552 VPREB3Q9UKI3 123 aa10.74□□□□□ -0.69
MSI1-201ENST00000257552 TINCRA0A1B0GVN0 87 aa10.74□□□□□ -0.69
MSI1-201ENST00000257552 Q6ZSN1 163 aa10.74□□□□□ -0.69
MSI1-201ENST00000257552 Q8N2B8 174 aa10.74□□□□□ -0.69
MSI1-201ENST00000257552 SPANXA1Q9NS26 97 aa10.74□□□□□ -0.69
MSI1-201ENST00000257552 LINC00694P0DN24 101 aa10.73□□□□□ -0.69
MSI1-201ENST00000257552 LINC00467Q9BRT7 94 aa10.73□□□□□ -0.69
MSI1-201ENST00000257552 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.73□□□□□ -0.69
MSI1-201ENST00000257552 TMEM126AQ9H061 195 aa10.73□□□□□ -0.69
MSI1-201ENST00000257552 KLK5Q9Y337 293 aaPredicted RBP10.73□□□□□ -0.69
MSI1-201ENST00000257552 NOTCH3Q9UM47 2321 aa10.73□□□□□ -0.69
MSI1-201ENST00000257552 DAZ2Q13117 558 aaKnown RBP10.72□□□□□ -0.69
MSI1-201ENST00000257552 DAZ4Q86SG3 579 aaKnown RBP10.72□□□□□ -0.69
MSI1-201ENST00000257552 LINC01356Q8N9X3 169 aa10.72□□□□□ -0.69
MSI1-201ENST00000257552 Q9H8V8 135 aa10.72□□□□□ -0.69
MSI1-201ENST00000257552 DAZ3Q9NR90 486 aaKnown RBP10.72□□□□□ -0.69
MSI1-201ENST00000257552 UBE2D4Q9Y2X8 147 aa10.72□□□□□ -0.69
MSI1-201ENST00000257552 RBMY1A1P0DJD3 496 aaKnown RBP10.72□□□□□ -0.69
MSI1-201ENST00000257552 RBMY1CP0DJD4 496 aa10.72□□□□□ -0.69
MSI1-201ENST00000257552 RBMY1FQ15415 496 aaKnown RBP10.72□□□□□ -0.69
MSI1-201ENST00000257552 C2CD3Q4AC94 2353 aa10.72□□□□□ -0.69
MSI1-201ENST00000257552 LINC00308Q8TCZ7 52 aa10.71□□□□□ -0.69
MSI1-201ENST00000257552 CHCHD7Q9BUK0 85 aa10.71□□□□□ -0.69
MSI1-201ENST00000257552 LOC107984640A0A0U1RRK4 108 aa10.71□□□□□ -0.7
MSI1-201ENST00000257552 CIRBPQ14011 172 aaKnown RBP10.71□□□□□ -0.7
MSI1-201ENST00000257552 HECTD1Q9ULT8 2610 aa10.7□□□□□ -0.7
MSI1-201ENST00000257552 COX6A2Q02221 97 aa10.7□□□□□ -0.7
MSI1-201ENST00000257552 BAALC-AS2P0C853 105 aa10.7□□□□□ -0.7
MSI1-201ENST00000257552 DGAT2L7PQ6IED9 249 aa10.7□□□□□ -0.7
MSI1-201ENST00000257552 NACAE9PAV3 2078 aa10.7□□□□□ -0.7
MSI1-201ENST00000257552 H3BUA1 57 aa10.69□□□□□ -0.7
MSI1-201ENST00000257552 COX7A2LO14548 114 aa10.69□□□□□ -0.7
MSI1-201ENST00000257552 RS1O15537 224 aa10.69□□□□□ -0.7
MSI1-201ENST00000257552 K7EMT4 169 aa10.69□□□□□ -0.7
MSI1-201ENST00000257552 IGLV1-40P01703 118 aa10.69□□□□□ -0.7
MSI1-201ENST00000257552 SYNJ2BPP57105 145 aa10.69□□□□□ -0.7
MSI1-201ENST00000257552 C3orf22Q8N5N4 141 aa10.69□□□□□ -0.7
MSI1-201ENST00000257552 K7EQG2 157 aa10.68□□□□□ -0.7
MSI1-201ENST00000257552 ACYP1P07311 99 aa10.68□□□□□ -0.7
MSI1-201ENST00000257552 LINC00643Q86TS7 51 aa10.68□□□□□ -0.7
MSI1-201ENST00000257552 A0A096LNT2 108 aa10.68□□□□□ -0.7
MSI1-201ENST00000257552 GAGE2AQ6NT46 116 aa10.68□□□□□ -0.7
MSI1-201ENST00000257552 SOSTDC1Q6X4U4 206 aa10.68□□□□□ -0.7
MSI1-201ENST00000257552 Q9HAA7 133 aa10.68□□□□□ -0.7
MSI1-201ENST00000257552 NDUFA1O15239 70 aa10.68□□□□□ -0.7
MSI1-201ENST00000257552 NDUFA7O95182 113 aa10.68□□□□□ -0.7
MSI1-201ENST00000257552 DSCR9P59020 149 aa10.68□□□□□ -0.7
MSI1-201ENST00000257552 Q96MF0 132 aa10.68□□□□□ -0.7
MSI1-201ENST00000257552 HOXD3P31249 432 aaPredicted RBP10.67□□□□□ -0.7
MSI1-201ENST00000257552 TIMM17BO60830 172 aa10.67□□□□□ -0.7
MSI1-201ENST00000257552 HERVK_113P63121 156 aa10.67□□□□□ -0.7
MSI1-201ENST00000257552 FAM218AQ96MZ4 157 aa10.67□□□□□ -0.7
MSI1-201ENST00000257552 IMUPQ9GZP8 106 aa10.67□□□□□ -0.7
MSI1-201ENST00000257552 TIRAPP58753 221 aa10.66□□□□□ -0.7
MSI1-201ENST00000257552 FASNP49327 2511 aaKnown RBP10.66□□□□□ -0.7
MSI1-201ENST00000257552 IGHV4-31P0DP07 118 aa10.65□□□□□ -0.7
MSI1-201ENST00000257552 TRAV13-1A0A0B4J241 112 aa10.65□□□□□ -0.7
MSI1-201ENST00000257552 PIK3CD-AS1Q5SR53 167 aa10.65□□□□□ -0.71
MSI1-201ENST00000257552 PRIMA1Q86XR5 153 aa10.65□□□□□ -0.71
MSI1-201ENST00000257552 EDA2RQ9HAV5 297 aa10.65□□□□□ -0.71
MSI1-201ENST00000257552 UQCRQO14949 82 aa10.64□□□□□ -0.71
MSI1-201ENST00000257552 DEFB136Q30KP8 78 aa10.64□□□□□ -0.71
MSI1-201ENST00000257552 DEFB113Q30KQ7 82 aa10.64□□□□□ -0.71
MSI1-201ENST00000257552 IGHV3OR16-12A0A075B7B8 117 aa10.63□□□□□ -0.71
MSI1-201ENST00000257552 PSMB8P28062 276 aa10.63□□□□□ -0.71
MSI1-201ENST00000257552 UNC79Q9P2D8 2635 aa10.62□□□□□ -0.71
MSI1-201ENST00000257552 DEFB131AP59861 70 aa10.62□□□□□ -0.71
MSI1-201ENST00000257552 CFHR3Q02985 330 aa10.62□□□□□ -0.71
MSI1-201ENST00000257552 C22orf24Q9Y442 160 aa10.62□□□□□ -0.71
MSI1-201ENST00000257552 CR1P17927 2039 aa10.62□□□□□ -0.71
MSI1-201ENST00000257552 LINC00242Q5T6M2 205 aa10.62□□□□□ -0.71
MSI1-201ENST00000257552 C18orf65Q6ZTR6 163 aa10.62□□□□□ -0.71
MSI1-201ENST00000257552 LINC00526Q96FQ7 95 aa10.62□□□□□ -0.71
MSI1-201ENST00000257552 JMJD1CQ15652 2540 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms