RNA–Protein interactions for RNA: ENST00000255622.10

PDE6B-201, Transcript of phosphodiesterase 6B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDE6B, Length 3,280 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-201ENST00000255622 WNK1Q9H4A3 2382 aa8.34□□□□□ -1.07
PDE6B-201ENST00000255622 PSMB8P28062 276 aa8.34□□□□□ -1.07
PDE6B-201ENST00000255622 RPL39P62891 51 aaKnown RBP8.34□□□□□ -1.07
PDE6B-201ENST00000255622 SUMO4Q6EEV6 95 aa8.34□□□□□ -1.07
PDE6B-201ENST00000255622 LINC00643Q86TS7 51 aa8.34□□□□□ -1.07
PDE6B-201ENST00000255622 B4DSR2 109 aa8.34□□□□□ -1.08
PDE6B-201ENST00000255622 F5H697 171 aa8.34□□□□□ -1.08
PDE6B-201ENST00000255622 SMCR5Q8TEV8 140 aa8.34□□□□□ -1.08
PDE6B-201ENST00000255622 SERP2Q8N6R1 65 aa8.33□□□□□ -1.08
PDE6B-201ENST00000255622 TSHBP01222 138 aa8.33□□□□□ -1.08
PDE6B-201ENST00000255622 MED14OSP0DP75 135 aa8.33□□□□□ -1.08
PDE6B-201ENST00000255622 HIST2H2BCQ6DN03 193 aa8.33□□□□□ -1.08
PDE6B-201ENST00000255622 HIST2H2BDQ6DRA6 164 aa8.33□□□□□ -1.08
PDE6B-201ENST00000255622 SDIM1Q6ZPB5 146 aa8.33□□□□□ -1.08
PDE6B-201ENST00000255622 TEX15Q9BXT5 2789 aa8.33□□□□□ -1.08
PDE6B-201ENST00000255622 AKAP9Q99996 3911 aa8.33□□□□□ -1.08
PDE6B-201ENST00000255622 NXPH4O95158 308 aa8.32□□□□□ -1.08
PDE6B-201ENST00000255622 PRSS2P07478 247 aa8.32□□□□□ -1.08
PDE6B-201ENST00000255622 LINC00474Q9P2X8 69 aa8.32□□□□□ -1.08
PDE6B-201ENST00000255622 TRAV8-3A0A0A6YYJ7 113 aa8.32□□□□□ -1.08
PDE6B-201ENST00000255622 FHL2Q14192 279 aa8.32□□□□□ -1.08
PDE6B-201ENST00000255622 MPLKIPQ8TAP9 179 aa8.32□□□□□ -1.08
PDE6B-201ENST00000255622 IGKV3D-7A0A0C4DH55 119 aa8.31□□□□□ -1.08
PDE6B-201ENST00000255622 SPINK13Q1W4C9 94 aa8.31□□□□□ -1.08
PDE6B-201ENST00000255622 FAM240AA0A1B0GVK7 77 aa8.31□□□□□ -1.08
PDE6B-201ENST00000255622 K7EMT4 169 aa8.31□□□□□ -1.08
PDE6B-201ENST00000255622 DAZ4Q86SG3 579 aaKnown RBP8.31□□□□□ -1.08
PDE6B-201ENST00000255622 SPANXDQ9BXN6 97 aa8.31□□□□□ -1.08
PDE6B-201ENST00000255622 A0A087WVE0 104 aa8.3□□□□□ -1.08
PDE6B-201ENST00000255622 H7C423 109 aa8.3□□□□□ -1.08
PDE6B-201ENST00000255622 RPL18AQ02543 176 aaKnown RBP8.3□□□□□ -1.08
PDE6B-201ENST00000255622 MRPL55Q7Z7F7 128 aaKnown RBP8.3□□□□□ -1.08
PDE6B-201ENST00000255622 IGLV4-69A0A075B6H9 119 aa8.3□□□□□ -1.08
PDE6B-201ENST00000255622 SDHAF1A6NFY7 115 aa8.3□□□□□ -1.08
PDE6B-201ENST00000255622 C11orf86A6NJI1 115 aa8.3□□□□□ -1.08
PDE6B-201ENST00000255622 IGHV3-16A0A0C4DH30 117 aa8.29□□□□□ -1.08
PDE6B-201ENST00000255622 PF4P02776 101 aa8.29□□□□□ -1.08
PDE6B-201ENST00000255622 POLR2KP53803 58 aaKnown RBP8.29□□□□□ -1.08
PDE6B-201ENST00000255622 C20orf197Q8N268 126 aa8.29□□□□□ -1.08
PDE6B-201ENST00000255622 C11orf45Q8TAV5 145 aa8.29□□□□□ -1.08
PDE6B-201ENST00000255622 MTORP42345 2549 aa8.29□□□□□ -1.08
PDE6B-201ENST00000255622 IGHV4OR15-8A0A075B7B6 117 aa8.29□□□□□ -1.08
PDE6B-201ENST00000255622 A0A087WW49 117 aa8.29□□□□□ -1.08
PDE6B-201ENST00000255622 A0A0J9YX75 114 aa8.29□□□□□ -1.08
PDE6B-201ENST00000255622 CD164Q04900 197 aa8.29□□□□□ -1.08
PDE6B-201ENST00000255622 OPRPNQ99935 248 aaPredicted RBP8.29□□□□□ -1.08
PDE6B-201ENST00000255622 NBPF19A0A087WUL8 3843 aa8.29□□□□□ -1.08
PDE6B-201ENST00000255622 IGIPA6NJ69 53 aa8.28□□□□□ -1.08
PDE6B-201ENST00000255622 CLEC2BQ92478 149 aa8.28□□□□□ -1.08
PDE6B-201ENST00000255622 C2CD3Q4AC94 2353 aa8.28□□□□□ -1.08
PDE6B-201ENST00000255622 SMIM26A0A096LP01 95 aa8.28□□□□□ -1.08
PDE6B-201ENST00000255622 KNCNA6PVL3 124 aa8.28□□□□□ -1.08
PDE6B-201ENST00000255622 IGHV3-33P01772 117 aa8.28□□□□□ -1.08
PDE6B-201ENST00000255622 PRB1P04280 392 aa8.28□□□□□ -1.08
PDE6B-201ENST00000255622 HTN1P15515 57 aa8.28□□□□□ -1.08
PDE6B-201ENST00000255622 FP248Q71RG6 208 aaPredicted RBP8.28□□□□□ -1.08
PDE6B-201ENST00000255622 PPP1R17O96001 155 aa8.28□□□□□ -1.08
PDE6B-201ENST00000255622 PRM2P04554 102 aa8.28□□□□□ -1.08
PDE6B-201ENST00000255622 SNRPD3P62318 126 aaKnown RBP8.28□□□□□ -1.08
PDE6B-201ENST00000255622 DEFB136Q30KP8 78 aa8.28□□□□□ -1.08
PDE6B-201ENST00000255622 C18orf65Q6ZTR6 163 aa8.28□□□□□ -1.08
PDE6B-201ENST00000255622 NIPBLQ6KC79 2804 aaeCLIP8.27□□□□□ -1.08
PDE6B-201ENST00000255622 K7EQG2 157 aa8.27□□□□□ -1.09
PDE6B-201ENST00000255622 TIMM17BO60830 172 aa8.27□□□□□ -1.09
PDE6B-201ENST00000255622 COX6B1P14854 86 aa8.27□□□□□ -1.09
PDE6B-201ENST00000255622 C16orf95Q9H693 158 aa8.27□□□□□ -1.09
PDE6B-201ENST00000255622 SERP1Q9Y6X1 66 aa8.27□□□□□ -1.09
PDE6B-201ENST00000255622 LINC01356Q8N9X3 169 aa8.27□□□□□ -1.09
PDE6B-201ENST00000255622 NF1P21359 2839 aa8.27□□□□□ -1.09
PDE6B-201ENST00000255622 VCYO14598 125 aa8.27□□□□□ -1.09
PDE6B-201ENST00000255622 TSPEAR-AS2P59090 65 aa8.27□□□□□ -1.09
PDE6B-201ENST00000255622 UPK3BQ9BT76 320 aa8.27□□□□□ -1.09
PDE6B-201ENST00000255622 USP24Q9UPU5 2620 aa8.26□□□□□ -1.09
PDE6B-201ENST00000255622 A8MZ25 164 aa8.26□□□□□ -1.09
PDE6B-201ENST00000255622 LINC01619G3V211 115 aa8.26□□□□□ -1.09
PDE6B-201ENST00000255622 HOXD3P31249 432 aaPredicted RBP8.26□□□□□ -1.09
PDE6B-201ENST00000255622 A0A096LNT2 108 aa8.26□□□□□ -1.09
PDE6B-201ENST00000255622 IGHV3-73A0A0B4J1V6 119 aa8.26□□□□□ -1.09
PDE6B-201ENST00000255622 RBMY1A1P0DJD3 496 aaKnown RBP8.26□□□□□ -1.09
PDE6B-201ENST00000255622 RBMY1CP0DJD4 496 aa8.26□□□□□ -1.09
PDE6B-201ENST00000255622 RBMY1FQ15415 496 aaKnown RBP8.26□□□□□ -1.09
PDE6B-201ENST00000255622 ACANP16112 2415 aa8.26□□□□□ -1.09
PDE6B-201ENST00000255622 H3BS24 57 aa8.25□□□□□ -1.09
PDE6B-201ENST00000255622 M0QY20 66 aa8.25□□□□□ -1.09
PDE6B-201ENST00000255622 PAX4O43316 350 aa8.25□□□□□ -1.09
PDE6B-201ENST00000255622 CHD6Q8TD26 2715 aa8.25□□□□□ -1.09
PDE6B-201ENST00000255622 UBR5O95071 2799 aaPredicted RBP8.25□□□□□ -1.09
PDE6B-201ENST00000255622 IGHV1OR15-1A0A075B7D0 117 aa8.25□□□□□ -1.09
PDE6B-201ENST00000255622 TRBV27A0A0K0K1C4 114 aa8.25□□□□□ -1.09
PDE6B-201ENST00000255622 TRIAP1O43715 76 aa8.25□□□□□ -1.09
PDE6B-201ENST00000255622 ACYP1P07311 99 aa8.25□□□□□ -1.09
PDE6B-201ENST00000255622 ZNF876PQ49A33 203 aa8.25□□□□□ -1.09
PDE6B-201ENST00000255622 C5orf38Q86SI9 138 aa8.25□□□□□ -1.09
PDE6B-201ENST00000255622 ZNF580Q9UK33 172 aa8.25□□□□□ -1.09
PDE6B-201ENST00000255622 A0A0B4J2C4 111 aa8.25□□□□□ -1.09
PDE6B-201ENST00000255622 SOSTDC1Q6X4U4 206 aa8.25□□□□□ -1.09
PDE6B-201ENST00000255622 COX6CP09669 75 aa8.24□□□□□ -1.09
PDE6B-201ENST00000255622 SLURP1P55000 103 aa8.24□□□□□ -1.09
PDE6B-201ENST00000255622 HIST1H4AP62805 103 aaKnown RBP8.24□□□□□ -1.09
PDE6B-201ENST00000255622 A0A0J9YY99 117 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms