RNA–Protein interactions for RNA: ENST00000254630.11

PTCD3-201, Transcript of pentatricopeptide repeat domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD3, Length 6,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-201ENST00000254630 ATP5EP2Q5VTU8 51 aa6.37□□□□□ -1.39
PTCD3-201ENST00000254630 C11orf21Q9P2W6 132 aa6.37□□□□□ -1.39
PTCD3-201ENST00000254630 CHD3Q12873 2000 aaKnown RBP6.36□□□□□ -1.39
PTCD3-201ENST00000254630 LINC00526Q96FQ7 95 aa6.36□□□□□ -1.39
PTCD3-201ENST00000254630 RETNQ9HD89 108 aa6.36□□□□□ -1.39
PTCD3-201ENST00000254630 AVPP01185 164 aa6.36□□□□□ -1.39
PTCD3-201ENST00000254630 UBE2D3P61077 147 aa6.36□□□□□ -1.39
PTCD3-201ENST00000254630 C6orf99Q4VX62 202 aa6.36□□□□□ -1.39
PTCD3-201ENST00000254630 OXLD1Q5BKU9 147 aa6.36□□□□□ -1.39
PTCD3-201ENST00000254630 IGLV9-49A0A0B4J1Y8 123 aa6.36□□□□□ -1.39
PTCD3-201ENST00000254630 USP17L23D6RBM5 183 aa6.35□□□□□ -1.39
PTCD3-201ENST00000254630 KRTAP10-9P60411 292 aa6.35□□□□□ -1.39
PTCD3-201ENST00000254630 UBE2D2P62837 147 aa6.35□□□□□ -1.39
PTCD3-201ENST00000254630 RNASE8Q8TDE3 154 aaKnown RBP6.35□□□□□ -1.39
PTCD3-201ENST00000254630 INTS1Q8N201 2190 aaKnown RBP6.35□□□□□ -1.39
PTCD3-201ENST00000254630 DOCK7Q96N67 2140 aa6.35□□□□□ -1.39
PTCD3-201ENST00000254630 TP73-AS1Q9UF72 201 aa6.35□□□□□ -1.39
PTCD3-201ENST00000254630 C3orf84H3BNL1 204 aa6.34□□□□□ -1.39
PTCD3-201ENST00000254630 C1orf158Q8N1D5 194 aa6.34□□□□□ -1.39
PTCD3-201ENST00000254630 MRGPRG-AS1Q2M3A8 158 aa6.34□□□□□ -1.39
PTCD3-201ENST00000254630 YPEL4Q96NS1 127 aa6.34□□□□□ -1.39
PTCD3-201ENST00000254630 PCNX3Q9H6A9 2034 aa6.34□□□□□ -1.39
PTCD3-201ENST00000254630 C10orf142B7Z368 130 aa6.34□□□□□ -1.39
PTCD3-201ENST00000254630 SMIM11BQ8TCY0 68 aa6.33□□□□□ -1.4
PTCD3-201ENST00000254630 AHCTF1Q8WYP5 2266 aa6.33□□□□□ -1.4
PTCD3-201ENST00000254630 CCKP06307 115 aa6.33□□□□□ -1.4
PTCD3-201ENST00000254630 Q8IZM0 81 aa6.33□□□□□ -1.4
PTCD3-201ENST00000254630 CACNA1EQ15878 2313 aa6.33□□□□□ -1.4
PTCD3-201ENST00000254630 ICE1Q9Y2F5 2266 aa6.33□□□□□ -1.4
PTCD3-201ENST00000254630 CRIP2P52943 208 aaPredicted RBP6.33□□□□□ -1.4
PTCD3-201ENST00000254630 ZDBF2Q9HCK1 2354 aa6.32□□□□□ -1.4
PTCD3-201ENST00000254630 TECTAO75443 2155 aa6.32□□□□□ -1.4
PTCD3-201ENST00000254630 SPINK6Q6UWN8 80 aa6.32□□□□□ -1.4
PTCD3-201ENST00000254630 CDC42SE2Q9NRR3 84 aa6.32□□□□□ -1.4
PTCD3-201ENST00000254630 C10orf25Q5T742 122 aa6.31□□□□□ -1.4
PTCD3-201ENST00000254630 IGLV5-52A0A0A0MRZ9 124 aa6.31□□□□□ -1.4
PTCD3-201ENST00000254630 MT-ATP8P03928 68 aa6.31□□□□□ -1.4
PTCD3-201ENST00000254630 ZGRF1Q86YA3 2104 aa6.31□□□□□ -1.4
PTCD3-201ENST00000254630 DIDO1Q9BTC0 2240 aaKnown RBP6.31□□□□□ -1.4
PTCD3-201ENST00000254630 M0QXV9 152 aa6.31□□□□□ -1.4
PTCD3-201ENST00000254630 GTF3C1Q12789 2109 aa6.31□□□□□ -1.4
PTCD3-201ENST00000254630 MRPS12O15235 138 aaKnown RBP6.31□□□□□ -1.4
PTCD3-201ENST00000254630 NDUFV3P56181 108 aaKnown RBP6.31□□□□□ -1.4
PTCD3-201ENST00000254630 ZNF73O43830 326 aaPredicted RBP6.3□□□□□ -1.4
PTCD3-201ENST00000254630 POLR2KP53803 58 aaKnown RBP6.3□□□□□ -1.4
PTCD3-201ENST00000254630 PRR15LQ9BU68 103 aa6.3□□□□□ -1.4
PTCD3-201ENST00000254630 GAS8-AS1O95177 125 aa6.3□□□□□ -1.4
PTCD3-201ENST00000254630 MED12LQ86YW9 2145 aa6.3□□□□□ -1.4
PTCD3-201ENST00000254630 FAM236DA0A1B0GTK5 79 aa6.3□□□□□ -1.4
PTCD3-201ENST00000254630 IGLV1-51P01701 117 aa6.3□□□□□ -1.4
PTCD3-201ENST00000254630 FAM236CP0DP71 79 aa6.3□□□□□ -1.4
PTCD3-201ENST00000254630 ODF3L2Q3SX64 289 aa6.3□□□□□ -1.4
PTCD3-201ENST00000254630 REG3GQ6UW15 175 aa6.3□□□□□ -1.4
PTCD3-201ENST00000254630 MUC7Q8TAX7 377 aa6.3□□□□□ -1.4
PTCD3-201ENST00000254630 C3orf22Q8N5N4 141 aa6.29□□□□□ -1.4
PTCD3-201ENST00000254630 CYSRT1A8MQ03 144 aa6.29□□□□□ -1.4
PTCD3-201ENST00000254630 MPLKIPQ8TAP9 179 aa6.29□□□□□ -1.4
PTCD3-201ENST00000254630 CHCHD7Q9BUK0 85 aa6.29□□□□□ -1.4
PTCD3-201ENST00000254630 Q6ZQY7 126 aa6.29□□□□□ -1.4
PTCD3-201ENST00000254630 BRI3O95415 125 aa6.29□□□□□ -1.4
PTCD3-201ENST00000254630 NCOA6Q14686 2063 aaPredicted RBP6.29□□□□□ -1.4
PTCD3-201ENST00000254630 COX6A2Q02221 97 aa6.28□□□□□ -1.4
PTCD3-201ENST00000254630 MED13Q9UHV7 2174 aa6.28□□□□□ -1.4
PTCD3-201ENST00000254630 COL4A2P08572 1712 aa6.28□□□□□ -1.4
PTCD3-201ENST00000254630 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.28□□□□□ -1.4
PTCD3-201ENST00000254630 FHL2Q14192 279 aa6.28□□□□□ -1.4
PTCD3-201ENST00000254630 BRK1Q8WUW1 75 aa6.28□□□□□ -1.4
PTCD3-201ENST00000254630 WFDC13Q8IUB5 93 aa6.28□□□□□ -1.4
PTCD3-201ENST00000254630 FAM30AQ9NZY2 134 aa6.28□□□□□ -1.4
PTCD3-201ENST00000254630 C2orf91Q6ZV80 131 aa6.28□□□□□ -1.4
PTCD3-201ENST00000254630 C20orf197Q8N268 126 aa6.28□□□□□ -1.4
PTCD3-201ENST00000254630 UQCRQO14949 82 aa6.27□□□□□ -1.41
PTCD3-201ENST00000254630 RPL28P46779 137 aaKnown RBP6.27□□□□□ -1.41
PTCD3-201ENST00000254630 LST1O00453 97 aa6.27□□□□□ -1.41
PTCD3-201ENST00000254630 CNFNQ9BYD5 112 aa6.27□□□□□ -1.41
PTCD3-201ENST00000254630 ARFGEF3Q5TH69 2177 aa6.27□□□□□ -1.41
PTCD3-201ENST00000254630 EXPH5Q8NEV8 1989 aa6.27□□□□□ -1.41
PTCD3-201ENST00000254630 IGIPA6NJ69 53 aa6.26□□□□□ -1.41
PTCD3-201ENST00000254630 DSCAMO60469 2012 aa6.26□□□□□ -1.41
PTCD3-201ENST00000254630 Q6ZTC4 211 aa6.26□□□□□ -1.41
PTCD3-201ENST00000254630 NDUFC2-KCTD14E9PQ53 114 aa6.26□□□□□ -1.41
PTCD3-201ENST00000254630 POM121L12Q8N7R1 296 aa6.26□□□□□ -1.41
PTCD3-201ENST00000254630 ZNF580Q9UK33 172 aa6.26□□□□□ -1.41
PTCD3-201ENST00000254630 ATP5EP56381 51 aaPredicted RBP6.25□□□□□ -1.41
PTCD3-201ENST00000254630 USF3Q68DE3 2245 aa6.25□□□□□ -1.41
PTCD3-201ENST00000254630 K7ERS5 55 aa6.25□□□□□ -1.41
PTCD3-201ENST00000254630 EGFEM1PQ0D2K5 195 aa6.25□□□□□ -1.41
PTCD3-201ENST00000254630 C9orf116Q5BN46 136 aaPredicted RBP6.25□□□□□ -1.41
PTCD3-201ENST00000254630 CIRBP-AS1Q8TBR5 109 aa6.25□□□□□ -1.41
PTCD3-201ENST00000254630 C6orf223Q8N319 242 aa6.25□□□□□ -1.41
PTCD3-201ENST00000254630 F8WDY8 70 aa6.25□□□□□ -1.41
PTCD3-201ENST00000254630 LINC00242Q5T6M2 205 aa6.25□□□□□ -1.41
PTCD3-201ENST00000254630 UNQ6190/PRO20217Q6UXQ8 127 aa6.25□□□□□ -1.41
PTCD3-201ENST00000254630 MRPL55Q7Z7F7 128 aaKnown RBP6.25□□□□□ -1.41
PTCD3-201ENST00000254630 SPTSSBQ8NFR3 76 aa6.24□□□□□ -1.41
PTCD3-201ENST00000254630 SVIPQ8NHG7 77 aa6.24□□□□□ -1.41
PTCD3-201ENST00000254630 IGLV4-60A0A075B6I1 120 aa6.24□□□□□ -1.41
PTCD3-201ENST00000254630 SNURFQ9Y675 71 aa6.24□□□□□ -1.41
PTCD3-201ENST00000254630 MALRD1Q5VYJ5 2156 aa6.24□□□□□ -1.41
PTCD3-201ENST00000254630 TANC2Q9HCD6 1990 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 183.6 ms