RNA–Protein interactions for RNA: ENST00000248958.4

SDF2L1-201, Transcript of stromal cell derived factor 2 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2L1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1-201ENST00000248958 LAMTOR2Q9Y2Q5 125 aa15.93■□□□□ 0.14
SDF2L1-201ENST00000248958 CSDC2Q9Y534 153 aaKnown RBP15.93■□□□□ 0.14
SDF2L1-201ENST00000248958 IGKV3OR2-268A0A0C4DH90 116 aa15.92■□□□□ 0.14
SDF2L1-201ENST00000248958 XGP55808 180 aa15.92■□□□□ 0.14
SDF2L1-201ENST00000248958 C10orf91Q5T1B1 145 aa15.92■□□□□ 0.14
SDF2L1-201ENST00000248958 DGAT2L7PQ6IED9 249 aa15.92■□□□□ 0.14
SDF2L1-201ENST00000248958 PRELID3AQ96N28 172 aa15.92■□□□□ 0.14
SDF2L1-201ENST00000248958 CDC42SE2Q9NRR3 84 aa15.91■□□□□ 0.14
SDF2L1-201ENST00000248958 ABCA13Q86UQ4 5058 aa15.9■□□□□ 0.14
SDF2L1-201ENST00000248958 Q8N1X5 172 aa15.9■□□□□ 0.14
SDF2L1-201ENST00000248958 APOBP04114 4563 aaKnown RBP15.9■□□□□ 0.14
SDF2L1-201ENST00000248958 PRSS47A8MTI9 375 aa15.89■□□□□ 0.13
SDF2L1-201ENST00000248958 S100PP25815 95 aa15.89■□□□□ 0.13
SDF2L1-201ENST00000248958 ZNF664Q8N3J9 261 aa15.89■□□□□ 0.13
SDF2L1-201ENST00000248958 CHCHD10Q8WYQ3 142 aaPredicted RBP15.89■□□□□ 0.13
SDF2L1-201ENST00000248958 TIMM21Q9BVV7 248 aa15.89■□□□□ 0.13
SDF2L1-201ENST00000248958 CARHSP1Q9Y2V2 147 aaKnown RBP15.89■□□□□ 0.13
SDF2L1-201ENST00000248958 UBE2D4Q9Y2X8 147 aa15.89■□□□□ 0.13
SDF2L1-201ENST00000248958 GAGE12HA6NDE8 117 aa15.88■□□□□ 0.13
SDF2L1-201ENST00000248958 PRSS1P07477 247 aa15.88■□□□□ 0.13
SDF2L1-201ENST00000248958 CFAP161Q6P656 301 aa15.88■□□□□ 0.13
SDF2L1-201ENST00000248958 LINC00959A0A1B0GUT2 108 aa15.86■□□□□ 0.13
SDF2L1-201ENST00000248958 RAB5AP20339 215 aa15.86■□□□□ 0.13
SDF2L1-201ENST00000248958 RHEBQ15382 184 aa15.86■□□□□ 0.13
SDF2L1-201ENST00000248958 SS18Q15532 418 aa15.86■□□□□ 0.13
SDF2L1-201ENST00000248958 CCL25O15444 150 aa15.85■□□□□ 0.13
SDF2L1-201ENST00000248958 MAP1LC3AQ9H492 121 aa15.85■□□□□ 0.13
SDF2L1-201ENST00000248958 HSPG2P98160 4391 aa15.85■□□□□ 0.13
SDF2L1-201ENST00000248958 Q6ZSA8 131 aa15.84■□□□□ 0.13
SDF2L1-201ENST00000248958 AP5S1Q9NUS5 200 aa15.84■□□□□ 0.13
SDF2L1-201ENST00000248958 hDV102S1A0JD36 115 aa15.83■□□□□ 0.12
SDF2L1-201ENST00000248958 FAM30AQ9NZY2 134 aa15.83■□□□□ 0.12
SDF2L1-201ENST00000248958 COX19Q49B96 90 aa15.82■□□□□ 0.12
SDF2L1-201ENST00000248958 FOXI1Q12951 378 aa15.81■□□□□ 0.12
SDF2L1-201ENST00000248958 LINC01620Q4KN68 170 aa15.81■□□□□ 0.12
SDF2L1-201ENST00000248958 C9orf163Q8N9P6 203 aa15.81■□□□□ 0.12
SDF2L1-201ENST00000248958 RPS10P5Q9NQ39 176 aa15.81■□□□□ 0.12
SDF2L1-201ENST00000248958 SPANXA1Q9NS26 97 aa15.81■□□□□ 0.12
SDF2L1-201ENST00000248958 XCL1P47992 114 aa15.8■□□□□ 0.12
SDF2L1-201ENST00000248958 CNBPP62633 177 aaKnown RBP15.8■□□□□ 0.12
SDF2L1-201ENST00000248958 TRAV16A0A0A6YYK6 109 aaPredicted RBP15.79■□□□□ 0.12
SDF2L1-201ENST00000248958 LOC389332A0A1B0GUA5 103 aa15.79■□□□□ 0.12
SDF2L1-201ENST00000248958 C1orf196B1AJZ1 125 aa15.79■□□□□ 0.12
SDF2L1-201ENST00000248958 K7EMI3 77 aa15.79■□□□□ 0.12
SDF2L1-201ENST00000248958 RPL39P62891 51 aaKnown RBP15.79■□□□□ 0.12
SDF2L1-201ENST00000248958 NDUFA5Q16718 116 aa15.79■□□□□ 0.12
SDF2L1-201ENST00000248958 CD164L2Q6UWJ8 174 aa15.79■□□□□ 0.12
SDF2L1-201ENST00000248958 Q8N8P6 123 aa15.79■□□□□ 0.12
SDF2L1-201ENST00000248958 GNB1LQ9BYB4 327 aa15.79■□□□□ 0.12
SDF2L1-201ENST00000248958 KRTAP4-5Q9BYR2 181 aa15.79■□□□□ 0.12
SDF2L1-201ENST00000248958 C15orf56Q8N910 161 aa15.78■□□□□ 0.12
SDF2L1-201ENST00000248958 MRPS36P82909 103 aaKnown RBP15.77■□□□□ 0.12
SDF2L1-201ENST00000248958 Q6ZUT4 128 aa15.77■□□□□ 0.12
SDF2L1-201ENST00000248958 NXT2Q9NPJ8 142 aaKnown RBP15.77■□□□□ 0.12
SDF2L1-201ENST00000248958 EPM2AB3EWF7 344 aa15.76■□□□□ 0.11
SDF2L1-201ENST00000248958 IGHV1-58A0A0C4DH39 117 aa15.75■□□□□ 0.11
SDF2L1-201ENST00000248958 SNAPINO95295 136 aa15.75■□□□□ 0.11
SDF2L1-201ENST00000248958 IFI27P40305 119 aaPredicted RBP15.75■□□□□ 0.11
SDF2L1-201ENST00000248958 ORMDL2Q53FV1 153 aa15.75■□□□□ 0.11
SDF2L1-201ENST00000248958 PYGO1Q9Y3Y4 419 aa15.75■□□□□ 0.11
SDF2L1-201ENST00000248958 GVQW2A0A096LPI5 108 aaPredicted RBP15.74■□□□□ 0.11
SDF2L1-201ENST00000248958 APOC3P02656 99 aa15.74■□□□□ 0.11
SDF2L1-201ENST00000248958 MT-ND6P03923 174 aa15.74■□□□□ 0.11
SDF2L1-201ENST00000248958 RNASE13Q5GAN3 156 aaKnown RBP15.74■□□□□ 0.11
SDF2L1-201ENST00000248958 SVBPQ8N300 66 aa15.74■□□□□ 0.11
SDF2L1-201ENST00000248958 TRAV13-1A0A0B4J241 112 aa15.73■□□□□ 0.11
SDF2L1-201ENST00000248958 HAMPP81172 84 aa15.73■□□□□ 0.11
SDF2L1-201ENST00000248958 FAM229AH3BQW9 127 aa15.72■□□□□ 0.11
SDF2L1-201ENST00000248958 G0S2P27469 103 aa15.72■□□□□ 0.11
SDF2L1-201ENST00000248958 KIAA1644Q3SXP7 199 aa15.72■□□□□ 0.11
SDF2L1-201ENST00000248958 CHAC1Q9BUX1 264 aa15.72■□□□□ 0.11
SDF2L1-201ENST00000248958 IGHV3-64A0A075B6Q5 118 aa15.71■□□□□ 0.11
SDF2L1-201ENST00000248958 SMR3BP02814 79 aaPredicted RBP15.71■□□□□ 0.11
SDF2L1-201ENST00000248958 HIGD2BQ4VC39 106 aa15.71■□□□□ 0.11
SDF2L1-201ENST00000248958 CYSLTR1Q9Y271 337 aa15.71■□□□□ 0.11
SDF2L1-201ENST00000248958 SLPIP03973 132 aa15.7■□□□□ 0.1
SDF2L1-201ENST00000248958 Q5VSD8 79 aa15.7■□□□□ 0.1
SDF2L1-201ENST00000248958 FAM104AQ969W3 186 aa15.7■□□□□ 0.1
SDF2L1-201ENST00000248958 DNAH8Q96JB1 4490 aa15.7■□□□□ 0.1
SDF2L1-201ENST00000248958 COX7A2LO14548 114 aa15.69■□□□□ 0.1
SDF2L1-201ENST00000248958 C2orf66Q6UXQ4 117 aa15.69■□□□□ 0.1
SDF2L1-201ENST00000248958 SDIM1Q6ZPB5 146 aa15.69■□□□□ 0.1
SDF2L1-201ENST00000248958 SCXQ7RTU7 201 aa15.69■□□□□ 0.1
SDF2L1-201ENST00000248958 NPSP0C0P6 89 aa15.68■□□□□ 0.1
SDF2L1-201ENST00000248958 MALP21145 153 aa15.68■□□□□ 0.1
SDF2L1-201ENST00000248958 TMEM141Q96I45 108 aa15.67■□□□□ 0.1
SDF2L1-201ENST00000248958 OPRPNQ99935 248 aaPredicted RBP15.67■□□□□ 0.1
SDF2L1-201ENST00000248958 MRPL18Q9H0U6 180 aaKnown RBP15.67■□□□□ 0.1
SDF2L1-201ENST00000248958 IFITM10A6NMD0 228 aa15.66■□□□□ 0.1
SDF2L1-201ENST00000248958 ZNF561-AS1K7EIQ3 104 aa15.66■□□□□ 0.1
SDF2L1-201ENST00000248958 APOMO95445 188 aa15.66■□□□□ 0.1
SDF2L1-201ENST00000248958 CIRBP-AS1Q8TBR5 109 aa15.66■□□□□ 0.1
SDF2L1-201ENST00000248958 ALKBH7Q9BT30 221 aaPredicted RBP15.66■□□□□ 0.1
SDF2L1-201ENST00000248958 IGLV4-3A0A075B6K6 122 aa15.65■□□□□ 0.1
SDF2L1-201ENST00000248958 FABP9Q0Z7S8 132 aa15.65■□□□□ 0.1
SDF2L1-201ENST00000248958 PRSS3P2Q8NHM4 247 aa15.65■□□□□ 0.1
SDF2L1-201ENST00000248958 Q6ZN92 141 aa15.64■□□□□ 0.09
SDF2L1-201ENST00000248958 TEX43Q6ZNM6 134 aa15.63■□□□□ 0.09
SDF2L1-201ENST00000248958 PKIGQ9Y2B9 76 aa15.63■□□□□ 0.09
SDF2L1-201ENST00000248958 C2orf88Q9BSF0 95 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms