RNA–Protein interactions for RNA: ENST00000248948.3

VPREB3-201, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPREB3, Length 610 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-201ENST00000248948 COMMD7Q86VX2 200 aa8.33□□□□□ -1.08
VPREB3-201ENST00000248948 SEC11CQ9BY50 192 aa8.33□□□□□ -1.08
VPREB3-201ENST00000248948 LAMTOR2Q9Y2Q5 125 aa8.33□□□□□ -1.08
VPREB3-201ENST00000248948 CSDC2Q9Y534 153 aaKnown RBP8.33□□□□□ -1.08
VPREB3-201ENST00000248948 PRSS1P07477 247 aa8.32□□□□□ -1.08
VPREB3-201ENST00000248948 TMEM18Q96B42 140 aa8.32□□□□□ -1.08
VPREB3-201ENST00000248948 KRTAP17-1Q9BYP8 105 aa8.32□□□□□ -1.08
VPREB3-201ENST00000248948 CTDSP1Q9GZU7 261 aa8.32□□□□□ -1.08
VPREB3-201ENST00000248948 TRAV9-1A0A075B6T8 112 aa8.31□□□□□ -1.08
VPREB3-201ENST00000248948 IGKV3OR2-268A0A0C4DH90 116 aa8.31□□□□□ -1.08
VPREB3-201ENST00000248948 NPYP01303 97 aa8.31□□□□□ -1.08
VPREB3-201ENST00000248948 CNBPP62633 177 aaKnown RBP8.31□□□□□ -1.08
VPREB3-201ENST00000248948 CHCHD10Q8WYQ3 142 aaPredicted RBP8.31□□□□□ -1.08
VPREB3-201ENST00000248948 TIMM21Q9BVV7 248 aa8.31□□□□□ -1.08
VPREB3-201ENST00000248948 CDC42SE2Q9NRR3 84 aa8.31□□□□□ -1.08
VPREB3-201ENST00000248948 UBE2D4Q9Y2X8 147 aa8.31□□□□□ -1.08
VPREB3-201ENST00000248948 FAT1Q14517 4588 aa8.3□□□□□ -1.08
VPREB3-201ENST00000248948 GAGE12HA6NDE8 117 aa8.3□□□□□ -1.08
VPREB3-201ENST00000248948 EPM2AB3EWF7 344 aa8.3□□□□□ -1.08
VPREB3-201ENST00000248948 ZNF664Q8N3J9 261 aa8.3□□□□□ -1.08
VPREB3-201ENST00000248948 PRELID3AQ96N28 172 aa8.3□□□□□ -1.08
VPREB3-201ENST00000248948 KRTAP4-5Q9BYR2 181 aa8.3□□□□□ -1.08
VPREB3-201ENST00000248948 FAM30AQ9NZY2 134 aa8.3□□□□□ -1.08
VPREB3-201ENST00000248948 LINC00959A0A1B0GUT2 108 aa8.29□□□□□ -1.08
VPREB3-201ENST00000248948 hDV102S1A0JD36 115 aa8.29□□□□□ -1.08
VPREB3-201ENST00000248948 CFAP161Q6P656 301 aa8.29□□□□□ -1.08
VPREB3-201ENST00000248948 TMEM136Q6ZRR5 245 aa8.29□□□□□ -1.08
VPREB3-201ENST00000248948 C15orf56Q8N910 161 aa8.29□□□□□ -1.08
VPREB3-201ENST00000248948 PRSS47A8MTI9 375 aa8.28□□□□□ -1.08
VPREB3-201ENST00000248948 CCL25O15444 150 aa8.28□□□□□ -1.08
VPREB3-201ENST00000248948 FOXI1Q12951 378 aa8.28□□□□□ -1.08
VPREB3-201ENST00000248948 SS18Q15532 418 aa8.28□□□□□ -1.08
VPREB3-201ENST00000248948 LINC01620Q4KN68 170 aa8.28□□□□□ -1.08
VPREB3-201ENST00000248948 C10orf91Q5T1B1 145 aa8.28□□□□□ -1.08
VPREB3-201ENST00000248948 C9orf163Q8N9P6 203 aa8.28□□□□□ -1.08
VPREB3-201ENST00000248948 SPANXA1Q9NS26 97 aa8.28□□□□□ -1.08
VPREB3-201ENST00000248948 AP5S1Q9NUS5 200 aa8.28□□□□□ -1.08
VPREB3-201ENST00000248948 CARHSP1Q9Y2V2 147 aaKnown RBP8.28□□□□□ -1.08
VPREB3-201ENST00000248948 GVQW2A0A096LPI5 108 aaPredicted RBP8.27□□□□□ -1.09
VPREB3-201ENST00000248948 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.27□□□□□ -1.09
VPREB3-201ENST00000248948 HAMPP81172 84 aa8.27□□□□□ -1.09
VPREB3-201ENST00000248948 RHEBQ15382 184 aa8.27□□□□□ -1.09
VPREB3-201ENST00000248948 Q5VSD8 79 aa8.27□□□□□ -1.09
VPREB3-201ENST00000248948 Q6ZUT4 128 aa8.27□□□□□ -1.09
VPREB3-201ENST00000248948 MAP1LC3AQ9H492 121 aa8.27□□□□□ -1.09
VPREB3-201ENST00000248948 VPS13BQ7Z7G8 4022 aa8.26□□□□□ -1.09
VPREB3-201ENST00000248948 S100PP25815 95 aa8.26□□□□□ -1.09
VPREB3-201ENST00000248948 XCL1P47992 114 aa8.26□□□□□ -1.09
VPREB3-201ENST00000248948 SCXQ7RTU7 201 aa8.26□□□□□ -1.09
VPREB3-201ENST00000248948 CHAC1Q9BUX1 264 aa8.26□□□□□ -1.09
VPREB3-201ENST00000248948 K7EMI3 77 aa8.25□□□□□ -1.09
VPREB3-201ENST00000248948 RAB5AP20339 215 aa8.25□□□□□ -1.09
VPREB3-201ENST00000248948 MRPS36P82909 103 aaKnown RBP8.25□□□□□ -1.09
VPREB3-201ENST00000248948 CD164L2Q6UWJ8 174 aa8.25□□□□□ -1.09
VPREB3-201ENST00000248948 IGHV1-58A0A0C4DH39 117 aa8.24□□□□□ -1.09
VPREB3-201ENST00000248948 C1orf196B1AJZ1 125 aa8.24□□□□□ -1.09
VPREB3-201ENST00000248948 FAM229AH3BQW9 127 aa8.24□□□□□ -1.09
VPREB3-201ENST00000248948 RPL39P62891 51 aaKnown RBP8.24□□□□□ -1.09
VPREB3-201ENST00000248948 IGHV3-64A0A075B6Q5 118 aa8.23□□□□□ -1.09
VPREB3-201ENST00000248948 SMR3BP02814 79 aaPredicted RBP8.23□□□□□ -1.09
VPREB3-201ENST00000248948 IFI27P40305 119 aaPredicted RBP8.23□□□□□ -1.09
VPREB3-201ENST00000248948 COX19Q49B96 90 aa8.23□□□□□ -1.09
VPREB3-201ENST00000248948 Q8N8P6 123 aa8.23□□□□□ -1.09
VPREB3-201ENST00000248948 PYGO1Q9Y3Y4 419 aa8.23□□□□□ -1.09
VPREB3-201ENST00000248948 HIGD2BQ4VC39 106 aa8.22□□□□□ -1.09
VPREB3-201ENST00000248948 ORMDL2Q53FV1 153 aa8.22□□□□□ -1.09
VPREB3-201ENST00000248948 RNASE13Q5GAN3 156 aaKnown RBP8.22□□□□□ -1.09
VPREB3-201ENST00000248948 SDIM1Q6ZPB5 146 aa8.22□□□□□ -1.09
VPREB3-201ENST00000248948 NXT2Q9NPJ8 142 aaKnown RBP8.22□□□□□ -1.09
VPREB3-201ENST00000248948 PKIGQ9Y2B9 76 aa8.22□□□□□ -1.09
VPREB3-201ENST00000248948 TRAV13-1A0A0B4J241 112 aa8.21□□□□□ -1.1
VPREB3-201ENST00000248948 COX7A2LO14548 114 aa8.21□□□□□ -1.1
VPREB3-201ENST00000248948 MT-ND6P03923 174 aa8.21□□□□□ -1.1
VPREB3-201ENST00000248948 SLPIP03973 132 aa8.21□□□□□ -1.1
VPREB3-201ENST00000248948 CIRBPQ14011 172 aaKnown RBP8.21□□□□□ -1.1
VPREB3-201ENST00000248948 NDUFA5Q16718 116 aa8.21□□□□□ -1.1
VPREB3-201ENST00000248948 LINC00528Q8N1L1 170 aa8.21□□□□□ -1.1
VPREB3-201ENST00000248948 CIRBP-AS1Q8TBR5 109 aa8.21□□□□□ -1.1
VPREB3-201ENST00000248948 GNB1LQ9BYB4 327 aa8.21□□□□□ -1.1
VPREB3-201ENST00000248948 CYSLTR1Q9Y271 337 aa8.21□□□□□ -1.1
VPREB3-201ENST00000248948 SRRM2Q9UQ35 2752 aaKnown RBP8.2□□□□□ -1.1
VPREB3-201ENST00000248948 LOC389332A0A1B0GUA5 103 aa8.2□□□□□ -1.1
VPREB3-201ENST00000248948 IFITM10A6NMD0 228 aa8.2□□□□□ -1.1
VPREB3-201ENST00000248948 PLA2G1BP04054 148 aaKnown RBP8.2□□□□□ -1.1
VPREB3-201ENST00000248948 NPSP0C0P6 89 aa8.2□□□□□ -1.1
VPREB3-201ENST00000248948 FAM104AQ969W3 186 aa8.2□□□□□ -1.1
VPREB3-201ENST00000248948 RPS10P5Q9NQ39 176 aa8.2□□□□□ -1.1
VPREB3-201ENST00000248948 MALP21145 153 aa8.19□□□□□ -1.1
VPREB3-201ENST00000248948 SVBPQ8N300 66 aa8.19□□□□□ -1.1
VPREB3-201ENST00000248948 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.19□□□□□ -1.1
VPREB3-201ENST00000248948 IGLV4-3A0A075B6K6 122 aa8.18□□□□□ -1.1
VPREB3-201ENST00000248948 SNAPINO95295 136 aa8.18□□□□□ -1.1
VPREB3-201ENST00000248948 APOMO95445 188 aa8.18□□□□□ -1.1
VPREB3-201ENST00000248948 G0S2P27469 103 aa8.18□□□□□ -1.1
VPREB3-201ENST00000248948 C2orf66Q6UXQ4 117 aa8.18□□□□□ -1.1
VPREB3-201ENST00000248948 SPACA4Q8TDM5 124 aa8.18□□□□□ -1.1
VPREB3-201ENST00000248948 TMEM141Q96I45 108 aa8.18□□□□□ -1.1
VPREB3-201ENST00000248948 CARD19Q96LW7 228 aa8.18□□□□□ -1.1
VPREB3-201ENST00000248948 ZNF561-AS1K7EIQ3 104 aa8.17□□□□□ -1.1
VPREB3-201ENST00000248948 APOC3P02656 99 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms