RNA–Protein interactions for RNA: ENST00000243776.10

CHPF-201, Transcript of chondroitin polymerizing factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF, Length 3,013 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF-201ENST00000243776 PYGO1Q9Y3Y4 419 aa13.49□□□□□ -0.25
CHPF-201ENST00000243776 C3orf56Q8N813 242 aa13.48□□□□□ -0.25
CHPF-201ENST00000243776 IGHV3-53P01767 116 aa13.48□□□□□ -0.25
CHPF-201ENST00000243776 GAGE5Q13069 117 aa13.48□□□□□ -0.25
CHPF-201ENST00000243776 GAGE6Q13070 117 aa13.48□□□□□ -0.25
CHPF-201ENST00000243776 TMEM61Q8N0U2 210 aa13.47□□□□□ -0.25
CHPF-201ENST00000243776 TINCRA0A1B0GVN0 87 aa13.46□□□□□ -0.25
CHPF-201ENST00000243776 TMEM101Q96IK0 257 aa13.46□□□□□ -0.25
CHPF-201ENST00000243776 UBE2E2Q96LR5 201 aa13.46□□□□□ -0.25
CHPF-201ENST00000243776 XCL2Q9UBD3 114 aa13.46□□□□□ -0.25
CHPF-201ENST00000243776 TRAV13-1A0A0B4J241 112 aa13.46□□□□□ -0.26
CHPF-201ENST00000243776 Q9H8V8 135 aa13.46□□□□□ -0.26
CHPF-201ENST00000243776 IFITM1P13164 125 aa13.45□□□□□ -0.26
CHPF-201ENST00000243776 SPANXDQ9BXN6 97 aa13.45□□□□□ -0.26
CHPF-201ENST00000243776 SPANXCQ9NY87 97 aa13.45□□□□□ -0.26
CHPF-201ENST00000243776 SETXQ7Z333 2677 aaKnown RBP13.44□□□□□ -0.26
CHPF-201ENST00000243776 ZNF462Q96JM2 2506 aa13.44□□□□□ -0.26
CHPF-201ENST00000243776 LINC00694P0DN24 101 aa13.44□□□□□ -0.26
CHPF-201ENST00000243776 FN1P02751 2386 aaKnown RBP13.44□□□□□ -0.26
CHPF-201ENST00000243776 C11orf44Q8N8P7 122 aa13.43□□□□□ -0.26
CHPF-201ENST00000243776 CITED2Q99967 270 aaPredicted RBP13.43□□□□□ -0.26
CHPF-201ENST00000243776 NBPF19A0A087WUL8 3843 aa13.43□□□□□ -0.26
CHPF-201ENST00000243776 Q8N2B8 174 aa13.42□□□□□ -0.26
CHPF-201ENST00000243776 LST1O00453 97 aa13.42□□□□□ -0.26
CHPF-201ENST00000243776 ZNF415Q09FC8 603 aa13.42□□□□□ -0.26
CHPF-201ENST00000243776 SPANXA1Q9NS26 97 aa13.41□□□□□ -0.26
CHPF-201ENST00000243776 M0QXV9 152 aa13.41□□□□□ -0.26
CHPF-201ENST00000243776 ZNF469Q96JG9 3925 aaPredicted RBP13.41□□□□□ -0.26
CHPF-201ENST00000243776 CHCHD5Q9BSY4 110 aa13.4□□□□□ -0.26
CHPF-201ENST00000243776 GAGE12JA6NER3 117 aa13.4□□□□□ -0.26
CHPF-201ENST00000243776 GAGE7O76087 117 aa13.4□□□□□ -0.26
CHPF-201ENST00000243776 GAGE12FP0CL80 117 aa13.4□□□□□ -0.26
CHPF-201ENST00000243776 GAGE12GP0CL81 117 aa13.4□□□□□ -0.26
CHPF-201ENST00000243776 GAGE12IP0CL82 117 aa13.4□□□□□ -0.26
CHPF-201ENST00000243776 GAGE4Q13068 117 aa13.4□□□□□ -0.26
CHPF-201ENST00000243776 ZNF702PQ9H963 129 aa13.39□□□□□ -0.27
CHPF-201ENST00000243776 MTORP42345 2549 aa13.39□□□□□ -0.27
CHPF-201ENST00000243776 MEIG1Q5JSS6 88 aa13.39□□□□□ -0.27
CHPF-201ENST00000243776 TRGV1A0A0A0MS02 117 aa13.39□□□□□ -0.27
CHPF-201ENST00000243776 IGKV3OR2-268A0A0C4DH90 116 aa13.39□□□□□ -0.27
CHPF-201ENST00000243776 SOSTDC1Q6X4U4 206 aa13.39□□□□□ -0.27
CHPF-201ENST00000243776 LINC00308Q8TCZ7 52 aa13.39□□□□□ -0.27
CHPF-201ENST00000243776 NBEAL2Q6ZNJ1 2754 aa13.39□□□□□ -0.27
CHPF-201ENST00000243776 YAE1D1Q9NRH1 226 aa13.38□□□□□ -0.27
CHPF-201ENST00000243776 TMEM89A2RUT3 159 aa13.38□□□□□ -0.27
CHPF-201ENST00000243776 LINC00242Q5T6M2 205 aa13.37□□□□□ -0.27
CHPF-201ENST00000243776 C11orf72Q8NBR9 251 aa13.37□□□□□ -0.27
CHPF-201ENST00000243776 DYNLRB2Q8TF09 96 aa13.37□□□□□ -0.27
CHPF-201ENST00000243776 MAP6D1Q9H9H5 199 aa13.37□□□□□ -0.27
CHPF-201ENST00000243776 PIK3CD-AS1Q5SR53 167 aa13.37□□□□□ -0.27
CHPF-201ENST00000243776 VPREB3Q9UKI3 123 aa13.37□□□□□ -0.27
CHPF-201ENST00000243776 H3BT86 120 aa13.37□□□□□ -0.27
CHPF-201ENST00000243776 CIRBPQ14011 172 aaKnown RBP13.37□□□□□ -0.27
CHPF-201ENST00000243776 PRIMA1Q86XR5 153 aa13.36□□□□□ -0.27
CHPF-201ENST00000243776 NDUFA1O15239 70 aa13.36□□□□□ -0.27
CHPF-201ENST00000243776 LINC01356Q8N9X3 169 aa13.36□□□□□ -0.27
CHPF-201ENST00000243776 A0A1W2PRX2 142 aa13.35□□□□□ -0.27
CHPF-201ENST00000243776 ACANP16112 2415 aa13.34□□□□□ -0.27
CHPF-201ENST00000243776 PRORYQ9H606 182 aa13.33□□□□□ -0.28
CHPF-201ENST00000243776 Q6ZTI0 123 aa13.32□□□□□ -0.28
CHPF-201ENST00000243776 Q9HAA7 133 aa13.32□□□□□ -0.28
CHPF-201ENST00000243776 NTM-AS1Q6ZSK4 140 aa13.31□□□□□ -0.28
CHPF-201ENST00000243776 EDA2RQ9HAV5 297 aa13.31□□□□□ -0.28
CHPF-201ENST00000243776 SMIM1B2RUZ4 78 aa13.31□□□□□ -0.28
CHPF-201ENST00000243776 INSP01308 110 aa13.31□□□□□ -0.28
CHPF-201ENST00000243776 TOMM7Q9P0U1 55 aa13.31□□□□□ -0.28
CHPF-201ENST00000243776 GCN1Q92616 2671 aaKnown RBP13.31□□□□□ -0.28
CHPF-201ENST00000243776 FAM218AQ96MZ4 157 aa13.31□□□□□ -0.28
CHPF-201ENST00000243776 TIRAPP58753 221 aa13.3□□□□□ -0.28
CHPF-201ENST00000243776 SMIM20Q8N5G0 67 aa13.3□□□□□ -0.28
CHPF-201ENST00000243776 RS1O15537 224 aa13.29□□□□□ -0.28
CHPF-201ENST00000243776 PLA2G2AP14555 144 aa13.29□□□□□ -0.28
CHPF-201ENST00000243776 HERVK_113P63121 156 aa13.29□□□□□ -0.28
CHPF-201ENST00000243776 DAZ2Q13117 558 aaKnown RBP13.29□□□□□ -0.28
CHPF-201ENST00000243776 DAZ4Q86SG3 579 aaKnown RBP13.29□□□□□ -0.28
CHPF-201ENST00000243776 SMCR5Q8TEV8 140 aa13.29□□□□□ -0.28
CHPF-201ENST00000243776 DAZ3Q9NR90 486 aaKnown RBP13.29□□□□□ -0.28
CHPF-201ENST00000243776 RNF152Q8N8N0 203 aa13.29□□□□□ -0.28
CHPF-201ENST00000243776 LOC100131303A0A0U1RQF7 123 aa13.28□□□□□ -0.28
CHPF-201ENST00000243776 Q96MF0 132 aa13.28□□□□□ -0.28
CHPF-201ENST00000243776 COX7A2LO14548 114 aa13.28□□□□□ -0.28
CHPF-201ENST00000243776 TIMM17BO60830 172 aa13.28□□□□□ -0.28
CHPF-201ENST00000243776 BAALC-AS2P0C853 105 aa13.28□□□□□ -0.28
CHPF-201ENST00000243776 Q6YL49 198 aa13.28□□□□□ -0.28
CHPF-201ENST00000243776 FAM236AA0A1B0GUQ0 79 aa13.27□□□□□ -0.28
CHPF-201ENST00000243776 FAM236BA0A1B0GV22 79 aa13.27□□□□□ -0.28
CHPF-201ENST00000243776 DEFB114Q30KQ6 69 aa13.27□□□□□ -0.28
CHPF-201ENST00000243776 IGLV5-39A0A0G2JS06 123 aa13.27□□□□□ -0.29
CHPF-201ENST00000243776 Q6Q795 121 aa13.27□□□□□ -0.29
CHPF-201ENST00000243776 C1orf158Q8N1D5 194 aa13.27□□□□□ -0.29
CHPF-201ENST00000243776 LINC01600Q96MT4 127 aa13.27□□□□□ -0.29
CHPF-201ENST00000243776 IGLV5-45A0A087WSX0 123 aa13.26□□□□□ -0.29
CHPF-201ENST00000243776 DNAJC30Q96LL9 226 aa13.26□□□□□ -0.29
CHPF-201ENST00000243776 ITPR3Q14573 2671 aa13.26□□□□□ -0.29
CHPF-201ENST00000243776 BEAN1Q3B7T3 259 aa13.26□□□□□ -0.29
CHPF-201ENST00000243776 STHQ8IWL8 128 aa13.26□□□□□ -0.29
CHPF-201ENST00000243776 NOP10Q9NPE3 64 aaKnown RBP13.26□□□□□ -0.29
CHPF-201ENST00000243776 FLNAP21333 2647 aaKnown RBP13.26□□□□□ -0.29
CHPF-201ENST00000243776 ODF3L2Q3SX64 289 aa13.26□□□□□ -0.29
CHPF-201ENST00000243776 PEMTQ9UBM1 199 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms