RNA–Protein interactions for RNA: ENST00000228827.7

GPN3-201, Transcript of GPN-loop GTPase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPN3, Length 1,468 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-201ENST00000228827 XCL1P47992 114 aa9.12□□□□□ -0.95
GPN3-201ENST00000228827 KRTAP10-4P60372 401 aaPredicted RBP9.12□□□□□ -0.95
GPN3-201ENST00000228827 MRPL51Q4U2R6 128 aaKnown RBP9.12□□□□□ -0.95
GPN3-201ENST00000228827 CFAP161Q6P656 301 aa9.12□□□□□ -0.95
GPN3-201ENST00000228827 NRACQ8N912 160 aa9.12□□□□□ -0.95
GPN3-201ENST00000228827 IGHV3-64A0A075B6Q5 118 aa9.11□□□□□ -0.95
GPN3-201ENST00000228827 J3QL48 77 aa9.11□□□□□ -0.95
GPN3-201ENST00000228827 VCYO14598 125 aa9.11□□□□□ -0.95
GPN3-201ENST00000228827 FOXI1Q12951 378 aa9.11□□□□□ -0.95
GPN3-201ENST00000228827 FAM104BQ5XKR9 115 aa9.11□□□□□ -0.95
GPN3-201ENST00000228827 MRPL54Q6P161 138 aaKnown RBP9.11□□□□□ -0.95
GPN3-201ENST00000228827 SMDT1Q9H4I9 107 aa9.11□□□□□ -0.95
GPN3-201ENST00000228827 LINC00959A0A1B0GUT2 108 aa9.1□□□□□ -0.95
GPN3-201ENST00000228827 CCL25O15444 150 aa9.1□□□□□ -0.95
GPN3-201ENST00000228827 SUMO2P61956 95 aaKnown RBP9.1□□□□□ -0.95
GPN3-201ENST00000228827 DPH3Q96FX2 82 aa9.1□□□□□ -0.95
GPN3-201ENST00000228827 PPP1R17O96001 155 aa9.09□□□□□ -0.95
GPN3-201ENST00000228827 CHTF8P0CG12 524 aa9.09□□□□□ -0.95
GPN3-201ENST00000228827 RPL37AP61513 92 aaKnown RBP9.09□□□□□ -0.95
GPN3-201ENST00000228827 MRPL52Q86TS9 123 aaKnown RBP9.09□□□□□ -0.95
GPN3-201ENST00000228827 CDC42SE2Q9NRR3 84 aa9.09□□□□□ -0.95
GPN3-201ENST00000228827 FLG2Q5D862 2391 aaPredicted RBP9.09□□□□□ -0.95
GPN3-201ENST00000228827 ZNF664Q8N3J9 261 aa9.08□□□□□ -0.96
GPN3-201ENST00000228827 KIR2DL4Q99706 377 aa9.08□□□□□ -0.96
GPN3-201ENST00000228827 A0A1B0GW15 77 aa9.08□□□□□ -0.96
GPN3-201ENST00000228827 PPP1R2P9O14990 202 aa9.08□□□□□ -0.96
GPN3-201ENST00000228827 CKS2P33552 79 aa9.08□□□□□ -0.96
GPN3-201ENST00000228827 SS18Q15532 418 aa9.08□□□□□ -0.96
GPN3-201ENST00000228827 RNASE13Q5GAN3 156 aaKnown RBP9.08□□□□□ -0.96
GPN3-201ENST00000228827 GVQW2A0A096LPI5 108 aaPredicted RBP9.07□□□□□ -0.96
GPN3-201ENST00000228827 HBBP68871 147 aa9.07□□□□□ -0.96
GPN3-201ENST00000228827 COX6A2Q02221 97 aa9.07□□□□□ -0.96
GPN3-201ENST00000228827 CIRBPQ14011 172 aaKnown RBP9.07□□□□□ -0.96
GPN3-201ENST00000228827 LINC00526Q96FQ7 95 aa9.07□□□□□ -0.96
GPN3-201ENST00000228827 UBE2D4Q9Y2X8 147 aa9.06□□□□□ -0.96
GPN3-201ENST00000228827 DMBT1Q9UGM3 2413 aaPredicted RBP9.06□□□□□ -0.96
GPN3-201ENST00000228827 LINC00862A6NCI5 91 aa9.05□□□□□ -0.96
GPN3-201ENST00000228827 KRTAP29-1A8MX34 341 aaPredicted RBP9.05□□□□□ -0.96
GPN3-201ENST00000228827 D6R8Y8 96 aa9.05□□□□□ -0.96
GPN3-201ENST00000228827 F8W036 122 aa9.05□□□□□ -0.96
GPN3-201ENST00000228827 TNFRSF6BO95407 300 aa9.05□□□□□ -0.96
GPN3-201ENST00000228827 PRSS3P2Q8NHM4 247 aa9.05□□□□□ -0.96
GPN3-201ENST00000228827 SPACA4Q8TDM5 124 aa9.05□□□□□ -0.96
GPN3-201ENST00000228827 C20orf78Q9BR46 151 aa9.05□□□□□ -0.96
GPN3-201ENST00000228827 A0A087WYN8 130 aa9.04□□□□□ -0.96
GPN3-201ENST00000228827 IGHV1-58A0A0C4DH39 117 aa9.04□□□□□ -0.96
GPN3-201ENST00000228827 IGKV2-24A0A0C4DH68 120 aa9.04□□□□□ -0.96
GPN3-201ENST00000228827 A0A1B0GXF2 115 aa9.04□□□□□ -0.96
GPN3-201ENST00000228827 S100A8P05109 93 aa9.04□□□□□ -0.96
GPN3-201ENST00000228827 CD164L2Q6UWJ8 174 aa9.04□□□□□ -0.96
GPN3-201ENST00000228827 TRBV24-1A0A075B6N3 115 aa9.03□□□□□ -0.96
GPN3-201ENST00000228827 TRAV13-1A0A0B4J241 112 aa9.03□□□□□ -0.96
GPN3-201ENST00000228827 NPYP01303 97 aa9.03□□□□□ -0.96
GPN3-201ENST00000228827 HNRNPA3P51991 378 aaKnown RBP9.03□□□□□ -0.96
GPN3-201ENST00000228827 RAB14P61106 215 aa9.03□□□□□ -0.96
GPN3-201ENST00000228827 SMAGPQ0VAQ4 97 aa9.03□□□□□ -0.96
GPN3-201ENST00000228827 MAJINQ3KP22 176 aa9.03□□□□□ -0.96
GPN3-201ENST00000228827 Q6ZUT4 128 aa9.03□□□□□ -0.96
GPN3-201ENST00000228827 RPL39P62891 51 aaKnown RBP9.02□□□□□ -0.96
GPN3-201ENST00000228827 IFITM2Q01629 132 aa9.02□□□□□ -0.96
GPN3-201ENST00000228827 TMEM18Q96B42 140 aa9.02□□□□□ -0.96
GPN3-201ENST00000228827 SMIM2Q9BVW6 85 aa9.02□□□□□ -0.96
GPN3-201ENST00000228827 CSDC2Q9Y534 153 aaKnown RBP9.02□□□□□ -0.96
GPN3-201ENST00000228827 LRP1Q07954 4544 aaKnown RBP9.02□□□□□ -0.96
GPN3-201ENST00000228827 C1orf196B1AJZ1 125 aa9.02□□□□□ -0.97
GPN3-201ENST00000228827 ZNF561-AS1K7EIQ3 104 aa9.02□□□□□ -0.97
GPN3-201ENST00000228827 RPL32P62910 135 aaKnown RBP9.02□□□□□ -0.97
GPN3-201ENST00000228827 FAT3Q8TDW7 4589 aa9.01□□□□□ -0.97
GPN3-201ENST00000228827 COX7A2LO14548 114 aa9.01□□□□□ -0.97
GPN3-201ENST00000228827 TCAPO15273 167 aa9.01□□□□□ -0.97
GPN3-201ENST00000228827 MALP21145 153 aa9.01□□□□□ -0.97
GPN3-201ENST00000228827 ATP5L2Q7Z4Y8 100 aa9.01□□□□□ -0.97
GPN3-201ENST00000228827 CARD19Q96LW7 228 aa9.01□□□□□ -0.97
GPN3-201ENST00000228827 PLAC8Q9NZF1 115 aa9.01□□□□□ -0.97
GPN3-201ENST00000228827 A0A096LNI7 61 aa9□□□□□ -0.97
GPN3-201ENST00000228827 PPBPP02775 128 aa9□□□□□ -0.97
GPN3-201ENST00000228827 TMEM136Q6ZRR5 245 aa9□□□□□ -0.97
GPN3-201ENST00000228827 TIMM21Q9BVV7 248 aa9□□□□□ -0.97
GPN3-201ENST00000228827 PHOX2AO14813 284 aa8.99□□□□□ -0.97
GPN3-201ENST00000228827 SYCNQ0VAF6 134 aa8.99□□□□□ -0.97
GPN3-201ENST00000228827 C5orf38Q86SI9 138 aa8.99□□□□□ -0.97
GPN3-201ENST00000228827 ORMDL3Q8N138 153 aa8.99□□□□□ -0.97
GPN3-201ENST00000228827 STPG4Q8N801 248 aa8.99□□□□□ -0.97
GPN3-201ENST00000228827 PRELID3AQ96N28 172 aa8.99□□□□□ -0.97
GPN3-201ENST00000228827 OPRPNQ99935 248 aaPredicted RBP8.99□□□□□ -0.97
GPN3-201ENST00000228827 PKHD1L1Q86WI1 4243 aa8.98□□□□□ -0.97
GPN3-201ENST00000228827 IGLV4-69A0A075B6H9 119 aa8.98□□□□□ -0.97
GPN3-201ENST00000228827 PNRC1Q12796 327 aaPredicted RBP8.98□□□□□ -0.97
GPN3-201ENST00000228827 OXTP01178 125 aa8.97□□□□□ -0.97
GPN3-201ENST00000228827 MT-ND4LP03901 98 aa8.97□□□□□ -0.97
GPN3-201ENST00000228827 C7orf33Q8WU49 177 aa8.97□□□□□ -0.97
GPN3-201ENST00000228827 ANAPC16Q96DE5 110 aa8.97□□□□□ -0.97
GPN3-201ENST00000228827 LOC389332A0A1B0GUA5 103 aa8.96□□□□□ -0.97
GPN3-201ENST00000228827 FAM104AQ969W3 186 aa8.96□□□□□ -0.97
GPN3-201ENST00000228827 SPANXA1Q9NS26 97 aa8.96□□□□□ -0.97
GPN3-201ENST00000228827 RAB5AP20339 215 aa8.96□□□□□ -0.98
GPN3-201ENST00000228827 CLLU1Q5K131 121 aa8.96□□□□□ -0.98
GPN3-201ENST00000228827 Q6ZRU5 148 aa8.96□□□□□ -0.98
GPN3-201ENST00000228827 CAMK2N2Q96S95 79 aa8.96□□□□□ -0.98
GPN3-201ENST00000228827 IFITM10A6NMD0 228 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms