RNA–Protein interactions for RNA: ENST00000225603.8

CBX1-201, Transcript of chromobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX1, Length 2,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-201ENST00000225603 FXYD2P54710 66 aa12.68□□□□□ -0.38
CBX1-201ENST00000225603 PAPPA-AS1Q5QFB9 102 aa12.68□□□□□ -0.38
CBX1-201ENST00000225603 C9orf118A6NHY6 69 aa12.68□□□□□ -0.38
CBX1-201ENST00000225603 PRADC1Q9BSG0 188 aa12.68□□□□□ -0.38
CBX1-201ENST00000225603 DNAH9Q9NYC9 4486 aa12.67□□□□□ -0.38
CBX1-201ENST00000225603 TRBV6-4A0A1B0GX49 114 aa12.67□□□□□ -0.38
CBX1-201ENST00000225603 C20orf203Q8NBC4 194 aa12.67□□□□□ -0.38
CBX1-201ENST00000225603 B9D2Q9BPU9 175 aa12.67□□□□□ -0.38
CBX1-201ENST00000225603 TNFRSF18Q9Y5U5 241 aa12.67□□□□□ -0.38
CBX1-201ENST00000225603 K7EP13 123 aa12.66□□□□□ -0.38
CBX1-201ENST00000225603 CEND1Q8N111 149 aa12.66□□□□□ -0.38
CBX1-201ENST00000225603 ZNRF2Q8NHG8 242 aa12.66□□□□□ -0.38
CBX1-201ENST00000225603 TM2D2Q9BX73 214 aa12.66□□□□□ -0.38
CBX1-201ENST00000225603 MEGF8Q7Z7M0 2845 aa12.66□□□□□ -0.38
CBX1-201ENST00000225603 TAL2Q16559 108 aa12.65□□□□□ -0.38
CBX1-201ENST00000225603 GAGE12JA6NER3 117 aa12.65□□□□□ -0.38
CBX1-201ENST00000225603 ATP5G1P05496 136 aa12.65□□□□□ -0.38
CBX1-201ENST00000225603 GAGE4Q13068 117 aa12.65□□□□□ -0.38
CBX1-201ENST00000225603 GAGE5Q13069 117 aa12.65□□□□□ -0.38
CBX1-201ENST00000225603 GAGE13Q4V321 117 aa12.65□□□□□ -0.38
CBX1-201ENST00000225603 DNAJC30Q96LL9 226 aa12.65□□□□□ -0.38
CBX1-201ENST00000225603 IGHV3-38A0A0C4DH36 116 aa12.64□□□□□ -0.39
CBX1-201ENST00000225603 TRBV10-1A0A0K0K1A3 114 aa12.64□□□□□ -0.39
CBX1-201ENST00000225603 TEX48A0A1B0GUV7 120 aa12.64□□□□□ -0.39
CBX1-201ENST00000225603 HTN3P15516 51 aa12.64□□□□□ -0.39
CBX1-201ENST00000225603 CRYBA4P53673 196 aa12.64□□□□□ -0.39
CBX1-201ENST00000225603 RAB37Q96AX2 223 aa12.64□□□□□ -0.39
CBX1-201ENST00000225603 TRBV7-3A0A075B6L6 115 aa12.64□□□□□ -0.39
CBX1-201ENST00000225603 H3BUT2 72 aa12.64□□□□□ -0.39
CBX1-201ENST00000225603 SMIM13P0DJ93 91 aa12.64□□□□□ -0.39
CBX1-201ENST00000225603 NANOS2P60321 138 aaKnown RBP12.64□□□□□ -0.39
CBX1-201ENST00000225603 PHLDA1Q8WV24 401 aaPredicted RBP12.64□□□□□ -0.39
CBX1-201ENST00000225603 OPRPNQ99935 248 aaPredicted RBP12.64□□□□□ -0.39
CBX1-201ENST00000225603 F5H768 121 aa12.63□□□□□ -0.39
CBX1-201ENST00000225603 HERVK_113P61574 105 aa12.63□□□□□ -0.39
CBX1-201ENST00000225603 Q6ZTC4 211 aa12.62□□□□□ -0.39
CBX1-201ENST00000225603 HIST1H4GQ99525 98 aa12.62□□□□□ -0.39
CBX1-201ENST00000225603 PRO0255Q9UI72 69 aa12.62□□□□□ -0.39
CBX1-201ENST00000225603 RPL36AP83881 106 aaKnown RBP12.62□□□□□ -0.39
CBX1-201ENST00000225603 C11orf45Q8TAV5 145 aa12.62□□□□□ -0.39
CBX1-201ENST00000225603 RPL36ALQ969Q0 106 aaKnown RBP12.62□□□□□ -0.39
CBX1-201ENST00000225603 VSIG2Q96IQ7 327 aa12.62□□□□□ -0.39
CBX1-201ENST00000225603 NAA38Q9BRA0 125 aaKnown RBP12.62□□□□□ -0.39
CBX1-201ENST00000225603 COL7A1Q02388 2944 aa12.61□□□□□ -0.39
CBX1-201ENST00000225603 A0A0J9YY99 117 aa12.61□□□□□ -0.39
CBX1-201ENST00000225603 ZNF815PA8K554 130 aa12.61□□□□□ -0.39
CBX1-201ENST00000225603 UBE2D3P61077 147 aa12.61□□□□□ -0.39
CBX1-201ENST00000225603 UBE2D2P62837 147 aa12.61□□□□□ -0.39
CBX1-201ENST00000225603 IGLV4-3A0A075B6K6 122 aa12.61□□□□□ -0.39
CBX1-201ENST00000225603 K7ERJ3 54 aa12.61□□□□□ -0.39
CBX1-201ENST00000225603 NFE4Q86UQ8 179 aa12.61□□□□□ -0.39
CBX1-201ENST00000225603 GYPEP15421 78 aa12.6□□□□□ -0.39
CBX1-201ENST00000225603 TMEM170BQ5T4T1 132 aa12.6□□□□□ -0.39
CBX1-201ENST00000225603 NHP2Q9NX24 153 aaKnown RBP12.6□□□□□ -0.39
CBX1-201ENST00000225603 PRKDCP78527 4128 aaKnown RBP12.6□□□□□ -0.39
CBX1-201ENST00000225603 TRAV26-1A0A087WT03 109 aa12.6□□□□□ -0.39
CBX1-201ENST00000225603 PAX4O43316 350 aa12.6□□□□□ -0.39
CBX1-201ENST00000225603 LINC00694P0DN24 101 aa12.6□□□□□ -0.39
CBX1-201ENST00000225603 GAGE10A6NGK3 116 aa12.59□□□□□ -0.39
CBX1-201ENST00000225603 PYGO1Q9Y3Y4 419 aa12.59□□□□□ -0.39
CBX1-201ENST00000225603 A0A1W2PPM0 123 aa12.58□□□□□ -0.39
CBX1-201ENST00000225603 VCX2Q9H322 139 aa12.58□□□□□ -0.4
CBX1-201ENST00000225603 GTF2H5Q6ZYL4 71 aa12.57□□□□□ -0.4
CBX1-201ENST00000225603 PLEKHB2Q96CS7 222 aa12.57□□□□□ -0.4
CBX1-201ENST00000225603 K7EP34 96 aa12.57□□□□□ -0.4
CBX1-201ENST00000225603 TSPEAR-AS2P59090 65 aa12.57□□□□□ -0.4
CBX1-201ENST00000225603 SCGB1D4Q6XE38 83 aa12.57□□□□□ -0.4
CBX1-201ENST00000225603 DAZ4Q86SG3 579 aaKnown RBP12.56□□□□□ -0.4
CBX1-201ENST00000225603 CHCHD7Q9BUK0 85 aa12.56□□□□□ -0.4
CBX1-201ENST00000225603 DAZ3Q9NR90 486 aaKnown RBP12.56□□□□□ -0.4
CBX1-201ENST00000225603 STAB2Q8WWQ8 2551 aa12.56□□□□□ -0.4
CBX1-201ENST00000225603 NTM-AS1Q6ZSK4 140 aa12.56□□□□□ -0.4
CBX1-201ENST00000225603 FAM104AQ969W3 186 aa12.56□□□□□ -0.4
CBX1-201ENST00000225603 A0A096LPF7 62 aa12.55□□□□□ -0.4
CBX1-201ENST00000225603 COTL1Q14019 142 aa12.55□□□□□ -0.4
CBX1-201ENST00000225603 AMELXQ99217 191 aa12.55□□□□□ -0.4
CBX1-201ENST00000225603 TMEM223A0PJW6 202 aa12.54□□□□□ -0.4
CBX1-201ENST00000225603 FABP2P12104 132 aa12.54□□□□□ -0.4
CBX1-201ENST00000225603 A0A0J9YXV3 536 aa12.54□□□□□ -0.4
CBX1-201ENST00000225603 ZNF22P17026 224 aaPredicted RBP12.54□□□□□ -0.4
CBX1-201ENST00000225603 CEMP1Q6PRD7 247 aaPredicted RBP12.53□□□□□ -0.4
CBX1-201ENST00000225603 SPCS1Q9Y6A9 102 aa12.53□□□□□ -0.4
CBX1-201ENST00000225603 J3QQQ9 107 aa12.53□□□□□ -0.4
CBX1-201ENST00000225603 NHLRC4P0CG21 123 aaPredicted RBP12.53□□□□□ -0.4
CBX1-201ENST00000225603 SPANXA1Q9NS26 97 aa12.53□□□□□ -0.4
CBX1-201ENST00000225603 DEFB131BA0A096LNP1 70 aa12.52□□□□□ -0.41
CBX1-201ENST00000225603 A0A1B0GWB2 263 aa12.52□□□□□ -0.41
CBX1-201ENST00000225603 ATP6V0E2Q8NHE4 81 aa12.52□□□□□ -0.41
CBX1-201ENST00000225603 UBE2D4Q9Y2X8 147 aa12.52□□□□□ -0.41
CBX1-201ENST00000225603 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.52□□□□□ -0.41
CBX1-201ENST00000225603 IGKV2-29A2NJV5 120 aaPredicted RBP12.52□□□□□ -0.41
CBX1-201ENST00000225603 LEPROTO15243 131 aa12.52□□□□□ -0.41
CBX1-201ENST00000225603 LGALS3P17931 250 aaKnown RBP12.52□□□□□ -0.41
CBX1-201ENST00000225603 OR5A1Q8NGJ0 315 aa12.51□□□□□ -0.41
CBX1-201ENST00000225603 IGLL5B9A064 214 aa12.5□□□□□ -0.41
CBX1-201ENST00000225603 SRSF9Q13242 221 aaKnown RBP eCLIP12.5□□□□□ -0.41
CBX1-201ENST00000225603 MRPS36P82909 103 aaKnown RBP12.5□□□□□ -0.41
CBX1-201ENST00000225603 RNASE13Q5GAN3 156 aaKnown RBP12.49□□□□□ -0.41
CBX1-201ENST00000225603 GTSF1LQ9H1H1 148 aa12.49□□□□□ -0.41
CBX1-201ENST00000225603 SPANXB1Q9NS25 103 aaPredicted RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 134.5 ms