RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 IMMP2LQ96T52 175 aa8.33□□□□□ -1.08
LSM5-201ENST00000223084 C20orf78Q9BR46 151 aa8.33□□□□□ -1.08
LSM5-201ENST00000223084 USP17L23D6RBM5 183 aa8.32□□□□□ -1.08
LSM5-201ENST00000223084 CDK2AP2O75956 126 aa8.32□□□□□ -1.08
LSM5-201ENST00000223084 PPBPP02775 128 aa8.32□□□□□ -1.08
LSM5-201ENST00000223084 TMEM136Q6ZRR5 245 aa8.32□□□□□ -1.08
LSM5-201ENST00000223084 ORMDL3Q8N138 153 aa8.32□□□□□ -1.08
LSM5-201ENST00000223084 PRELID3AQ96N28 172 aa8.32□□□□□ -1.08
LSM5-201ENST00000223084 KIR2DL4Q99706 377 aa8.32□□□□□ -1.08
LSM5-201ENST00000223084 SMIM2Q9BVW6 85 aa8.32□□□□□ -1.08
LSM5-201ENST00000223084 RPS10P5Q9NQ39 176 aa8.32□□□□□ -1.08
LSM5-201ENST00000223084 TRAV8-4A0A0B4J246 113 aa8.31□□□□□ -1.08
LSM5-201ENST00000223084 ATP6V1G1O75348 118 aa8.31□□□□□ -1.08
LSM5-201ENST00000223084 RPL32P62910 135 aaKnown RBP8.31□□□□□ -1.08
LSM5-201ENST00000223084 LCE2AQ5TA79 106 aaPredicted RBP8.31□□□□□ -1.08
LSM5-201ENST00000223084 OR5A1Q8NGJ0 315 aa8.31□□□□□ -1.08
LSM5-201ENST00000223084 TRAV9-1A0A075B6T8 112 aa8.3□□□□□ -1.08
LSM5-201ENST00000223084 PHOX2AO14813 284 aa8.3□□□□□ -1.08
LSM5-201ENST00000223084 TCAPO15273 167 aa8.3□□□□□ -1.08
LSM5-201ENST00000223084 ZNF25P17030 456 aaPredicted RBP8.3□□□□□ -1.08
LSM5-201ENST00000223084 S100A1P23297 94 aa8.3□□□□□ -1.08
LSM5-201ENST00000223084 LINC01620Q4KN68 170 aa8.3□□□□□ -1.08
LSM5-201ENST00000223084 TMEM101Q96IK0 257 aa8.3□□□□□ -1.08
LSM5-201ENST00000223084 ABCA13Q86UQ4 5058 aa8.29□□□□□ -1.08
LSM5-201ENST00000223084 LOC389332A0A1B0GUA5 103 aa8.29□□□□□ -1.08
LSM5-201ENST00000223084 GAGE12HA6NDE8 117 aa8.29□□□□□ -1.08
LSM5-201ENST00000223084 S100PP25815 95 aa8.29□□□□□ -1.08
LSM5-201ENST00000223084 MRPL52Q86TS9 123 aaKnown RBP8.29□□□□□ -1.08
LSM5-201ENST00000223084 CDC42SE2Q9NRR3 84 aa8.29□□□□□ -1.08
LSM5-201ENST00000223084 PRSS1P07477 247 aa8.28□□□□□ -1.08
LSM5-201ENST00000223084 XGP55808 180 aa8.28□□□□□ -1.08
LSM5-201ENST00000223084 RPL39P62891 51 aaKnown RBP8.28□□□□□ -1.08
LSM5-201ENST00000223084 HAMPP81172 84 aa8.28□□□□□ -1.08
LSM5-201ENST00000223084 KIAA1644Q3SXP7 199 aa8.28□□□□□ -1.08
LSM5-201ENST00000223084 C14orf177Q52M58 125 aa8.28□□□□□ -1.08
LSM5-201ENST00000223084 RNASE13Q5GAN3 156 aaKnown RBP8.28□□□□□ -1.08
LSM5-201ENST00000223084 CHCHD10Q8WYQ3 142 aaPredicted RBP8.28□□□□□ -1.08
LSM5-201ENST00000223084 UBE2D4Q9Y2X8 147 aa8.28□□□□□ -1.08
LSM5-201ENST00000223084 LINC00959A0A1B0GUT2 108 aa8.27□□□□□ -1.09
LSM5-201ENST00000223084 DGAT2L7PQ6IED9 249 aa8.27□□□□□ -1.09
LSM5-201ENST00000223084 ZNF664Q8N3J9 261 aa8.27□□□□□ -1.09
LSM5-201ENST00000223084 FAM30AQ9NZY2 134 aa8.27□□□□□ -1.09
LSM5-201ENST00000223084 DNAH8Q96JB1 4490 aa8.26□□□□□ -1.09
LSM5-201ENST00000223084 MAP1LC3AQ9H492 121 aa8.26□□□□□ -1.09
LSM5-201ENST00000223084 LAMTOR2Q9Y2Q5 125 aa8.26□□□□□ -1.09
LSM5-201ENST00000223084 PRSS47A8MTI9 375 aa8.25□□□□□ -1.09
LSM5-201ENST00000223084 CCL25O15444 150 aa8.25□□□□□ -1.09
LSM5-201ENST00000223084 RAB5AP20339 215 aa8.25□□□□□ -1.09
LSM5-201ENST00000223084 XCL1P47992 114 aa8.25□□□□□ -1.09
LSM5-201ENST00000223084 Q6ZUT4 128 aa8.25□□□□□ -1.09
LSM5-201ENST00000223084 TMEM18Q96B42 140 aa8.25□□□□□ -1.09
LSM5-201ENST00000223084 KRTAP4-5Q9BYR2 181 aa8.25□□□□□ -1.09
LSM5-201ENST00000223084 SMCO4Q9NRQ5 59 aa8.25□□□□□ -1.09
LSM5-201ENST00000223084 CSDC2Q9Y534 153 aaKnown RBP8.25□□□□□ -1.09
LSM5-201ENST00000223084 FOXI1Q12951 378 aa8.24□□□□□ -1.09
LSM5-201ENST00000223084 FAM104AQ969W3 186 aa8.24□□□□□ -1.09
LSM5-201ENST00000223084 OPRPNQ99935 248 aaPredicted RBP8.24□□□□□ -1.09
LSM5-201ENST00000223084 TIMM21Q9BVV7 248 aa8.24□□□□□ -1.09
LSM5-201ENST00000223084 hDV102S1A0JD36 115 aa8.23□□□□□ -1.09
LSM5-201ENST00000223084 SMAGPQ0VAQ4 97 aa8.23□□□□□ -1.09
LSM5-201ENST00000223084 SS18Q15532 418 aa8.23□□□□□ -1.09
LSM5-201ENST00000223084 COX19Q49B96 90 aa8.23□□□□□ -1.09
LSM5-201ENST00000223084 Q8N8P6 123 aa8.23□□□□□ -1.09
LSM5-201ENST00000223084 C15orf56Q8N910 161 aa8.23□□□□□ -1.09
LSM5-201ENST00000223084 YPEL4Q96NS1 127 aa8.23□□□□□ -1.09
LSM5-201ENST00000223084 TGIF2-C20orf24A0A0A6YYL0 155 aa8.22□□□□□ -1.09
LSM5-201ENST00000223084 TRAV13-1A0A0B4J241 112 aa8.22□□□□□ -1.09
LSM5-201ENST00000223084 IFI27P40305 119 aaPredicted RBP8.22□□□□□ -1.09
LSM5-201ENST00000223084 HIGD2BQ4VC39 106 aa8.22□□□□□ -1.09
LSM5-201ENST00000223084 CBLN2Q8IUK8 224 aa8.22□□□□□ -1.09
LSM5-201ENST00000223084 GNB1LQ9BYB4 327 aa8.22□□□□□ -1.09
LSM5-201ENST00000223084 SPANXA1Q9NS26 97 aa8.22□□□□□ -1.09
LSM5-201ENST00000223084 SLPIP03973 132 aa8.21□□□□□ -1.1
LSM5-201ENST00000223084 CFAP161Q6P656 301 aa8.21□□□□□ -1.1
LSM5-201ENST00000223084 Q6ZSA8 131 aa8.21□□□□□ -1.1
LSM5-201ENST00000223084 Q8N1X5 172 aa8.21□□□□□ -1.1
LSM5-201ENST00000223084 MRPL18Q9H0U6 180 aaKnown RBP8.21□□□□□ -1.1
LSM5-201ENST00000223084 SMR3BP02814 79 aaPredicted RBP8.2□□□□□ -1.1
LSM5-201ENST00000223084 FABP9Q0Z7S8 132 aa8.2□□□□□ -1.1
LSM5-201ENST00000223084 CD164L2Q6UWJ8 174 aa8.2□□□□□ -1.1
LSM5-201ENST00000223084 ALKBH7Q9BT30 221 aaPredicted RBP8.2□□□□□ -1.1
LSM5-201ENST00000223084 TMEM238LA0A1B0GVL6 79 aa8.19□□□□□ -1.1
LSM5-201ENST00000223084 C1orf196B1AJZ1 125 aa8.19□□□□□ -1.1
LSM5-201ENST00000223084 MT-ND6P03923 174 aa8.19□□□□□ -1.1
LSM5-201ENST00000223084 MRPS36P82909 103 aaKnown RBP8.19□□□□□ -1.1
LSM5-201ENST00000223084 C2orf66Q6UXQ4 117 aa8.19□□□□□ -1.1
LSM5-201ENST00000223084 C9orf163Q8N9P6 203 aa8.19□□□□□ -1.1
LSM5-201ENST00000223084 NXT2Q9NPJ8 142 aaKnown RBP8.19□□□□□ -1.1
LSM5-201ENST00000223084 AP5S1Q9NUS5 200 aa8.19□□□□□ -1.1
LSM5-201ENST00000223084 FAT1Q14517 4588 aa8.19□□□□□ -1.1
LSM5-201ENST00000223084 CNBPP62633 177 aaKnown RBP8.18□□□□□ -1.1
LSM5-201ENST00000223084 ORMDL2Q53FV1 153 aa8.18□□□□□ -1.1
LSM5-201ENST00000223084 LINC00526Q96FQ7 95 aa8.18□□□□□ -1.1
LSM5-201ENST00000223084 IGLV4-3A0A075B6K6 122 aa8.17□□□□□ -1.1
LSM5-201ENST00000223084 GVQW2A0A096LPI5 108 aaPredicted RBP8.17□□□□□ -1.1
LSM5-201ENST00000223084 IGHV1-58A0A0C4DH39 117 aa8.17□□□□□ -1.1
LSM5-201ENST00000223084 IFITM10A6NMD0 228 aa8.17□□□□□ -1.1
LSM5-201ENST00000223084 SCO1O75880 301 aa8.17□□□□□ -1.1
LSM5-201ENST00000223084 ZC2HC1BQ5TFG8 222 aa8.17□□□□□ -1.1
LSM5-201ENST00000223084 C5orf38Q86SI9 138 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms