RNA–Protein interactions for RNA: ENST00000219302.7

NME3-201, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NME3, Length 1,069 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-201ENST00000219302 CDC42SE2Q9NRR3 84 aa9.71□□□□□ -0.86
NME3-201ENST00000219302 PTTG1IPP53801 180 aa9.7□□□□□ -0.86
NME3-201ENST00000219302 CD164L2Q6UWJ8 174 aa9.7□□□□□ -0.86
NME3-201ENST00000219302 MRPL52Q86TS9 123 aaKnown RBP9.7□□□□□ -0.86
NME3-201ENST00000219302 A0A1W2PNN7 141 aa9.69□□□□□ -0.86
NME3-201ENST00000219302 SS18Q15532 418 aa9.69□□□□□ -0.86
NME3-201ENST00000219302 FAM210AQ96ND0 272 aa9.69□□□□□ -0.86
NME3-201ENST00000219302 ZNF561-AS1K7EIQ3 104 aa9.68□□□□□ -0.86
NME3-201ENST00000219302 TAGLN2P37802 199 aaKnown RBP9.68□□□□□ -0.86
NME3-201ENST00000219302 POLR2KP53803 58 aaKnown RBP9.68□□□□□ -0.86
NME3-201ENST00000219302 TMEM242Q9NWH2 141 aa9.68□□□□□ -0.86
NME3-201ENST00000219302 LPAP08519 4548 aa9.67□□□□□ -0.86
NME3-201ENST00000219302 CAMPP49913 170 aa9.67□□□□□ -0.86
NME3-201ENST00000219302 FAM231DQ6ZW35 169 aa9.67□□□□□ -0.86
NME3-201ENST00000219302 ZNF664Q8N3J9 261 aa9.67□□□□□ -0.86
NME3-201ENST00000219302 MRAP2Q96G30 205 aa9.67□□□□□ -0.86
NME3-201ENST00000219302 ST20Q9HBF5 79 aa9.67□□□□□ -0.86
NME3-201ENST00000219302 IGLV4-69A0A075B6H9 119 aa9.66□□□□□ -0.86
NME3-201ENST00000219302 TRBV27A0A0K0K1C4 114 aa9.66□□□□□ -0.86
NME3-201ENST00000219302 LOC107984640A0A0U1RRK4 108 aa9.66□□□□□ -0.86
NME3-201ENST00000219302 GATCO43716 136 aaKnown RBP9.66□□□□□ -0.86
NME3-201ENST00000219302 GAGE2BQ13066 116 aa9.66□□□□□ -0.86
NME3-201ENST00000219302 A8MWL6 223 aa9.65□□□□□ -0.86
NME3-201ENST00000219302 NUP35Q8NFH5 326 aa9.65□□□□□ -0.86
NME3-201ENST00000219302 ISOC2Q96AB3 205 aa9.65□□□□□ -0.86
NME3-201ENST00000219302 PSORS1C2Q9UIG4 136 aa9.64□□□□□ -0.87
NME3-201ENST00000219302 C7orf77A4D0Y5 90 aa9.63□□□□□ -0.87
NME3-201ENST00000219302 C1orf196B1AJZ1 125 aa9.63□□□□□ -0.87
NME3-201ENST00000219302 RAB4AP20338 218 aa9.63□□□□□ -0.87
NME3-201ENST00000219302 C9orf116Q5BN46 136 aaPredicted RBP9.63□□□□□ -0.87
NME3-201ENST00000219302 CT83Q5H943 113 aa9.63□□□□□ -0.87
NME3-201ENST00000219302 SLC51BQ86UW2 128 aa9.63□□□□□ -0.87
NME3-201ENST00000219302 TMEM191AQ9H0A3 160 aa9.63□□□□□ -0.87
NME3-201ENST00000219302 CSDC2Q9Y534 153 aaKnown RBP9.63□□□□□ -0.87
NME3-201ENST00000219302 TMEM250H0YL14 139 aa9.62□□□□□ -0.87
NME3-201ENST00000219302 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.62□□□□□ -0.87
NME3-201ENST00000219302 COX7A2LO14548 114 aa9.62□□□□□ -0.87
NME3-201ENST00000219302 APOMO95445 188 aa9.62□□□□□ -0.87
NME3-201ENST00000219302 MALP21145 153 aa9.61□□□□□ -0.87
NME3-201ENST00000219302 C2orf48Q96LS8 159 aa9.61□□□□□ -0.87
NME3-201ENST00000219302 CAMK2N2Q96S95 79 aa9.61□□□□□ -0.87
NME3-201ENST00000219302 A0A1B0GUT8 65 aa9.6□□□□□ -0.87
NME3-201ENST00000219302 VCYO14598 125 aa9.6□□□□□ -0.87
NME3-201ENST00000219302 PHF5AQ7RTV0 110 aaKnown RBP9.6□□□□□ -0.87
NME3-201ENST00000219302 AMN1Q8IY45 258 aa9.6□□□□□ -0.87
NME3-201ENST00000219302 UBE2D4Q9Y2X8 147 aa9.6□□□□□ -0.87
NME3-201ENST00000219302 HIGD1CA8MV81 97 aa9.59□□□□□ -0.87
NME3-201ENST00000219302 MT-ND6P03923 174 aa9.59□□□□□ -0.87
NME3-201ENST00000219302 RNF151Q2KHN1 245 aa9.59□□□□□ -0.87
NME3-201ENST00000219302 TSKUQ8WUA8 353 aa9.59□□□□□ -0.87
NME3-201ENST00000219302 BORCS7Q96B45 105 aa9.59□□□□□ -0.87
NME3-201ENST00000219302 RNASE13Q5GAN3 156 aaKnown RBP9.58□□□□□ -0.88
NME3-201ENST00000219302 C1orf137Q5JT78 98 aa9.58□□□□□ -0.88
NME3-201ENST00000219302 C5orf38Q86SI9 138 aa9.58□□□□□ -0.88
NME3-201ENST00000219302 TCTE3Q8IZS6 198 aa9.58□□□□□ -0.88
NME3-201ENST00000219302 NRACQ8N912 160 aa9.58□□□□□ -0.88
NME3-201ENST00000219302 OPRPNQ99935 248 aaPredicted RBP9.58□□□□□ -0.88
NME3-201ENST00000219302 TRAV13-1A0A0B4J241 112 aa9.57□□□□□ -0.88
NME3-201ENST00000219302 SMKR1H3BMG3 65 aa9.57□□□□□ -0.88
NME3-201ENST00000219302 FCER1GP30273 86 aa9.56□□□□□ -0.88
NME3-201ENST00000219302 LINC01551Q86U37 167 aa9.56□□□□□ -0.88
NME3-201ENST00000219302 KRTAP11-1Q8IUC1 163 aa9.56□□□□□ -0.88
NME3-201ENST00000219302 PRR26Q8N8Z3 221 aa9.56□□□□□ -0.88
NME3-201ENST00000219302 IGLV7-43P04211 117 aa9.55□□□□□ -0.88
NME3-201ENST00000219302 SUMO2P61956 95 aaKnown RBP9.55□□□□□ -0.88
NME3-201ENST00000219302 RPL18AQ02543 176 aaKnown RBP9.55□□□□□ -0.88
NME3-201ENST00000219302 Q6ZUT4 128 aa9.55□□□□□ -0.88
NME3-201ENST00000219302 FAM104AQ969W3 186 aa9.55□□□□□ -0.88
NME3-201ENST00000219302 TIMM21Q9BVV7 248 aa9.55□□□□□ -0.88
NME3-201ENST00000219302 OSTCQ9NRP0 149 aa9.55□□□□□ -0.88
NME3-201ENST00000219302 PPP1R17O96001 155 aa9.54□□□□□ -0.88
NME3-201ENST00000219302 BLOC1S1P78537 153 aa9.54□□□□□ -0.88
NME3-201ENST00000219302 SPAG11BQ08648 103 aa9.54□□□□□ -0.88
NME3-201ENST00000219302 SMAGPQ0VAQ4 97 aa9.54□□□□□ -0.88
NME3-201ENST00000219302 DIRC1Q969H9 104 aa9.54□□□□□ -0.88
NME3-201ENST00000219302 KIR2DL4Q99706 377 aa9.54□□□□□ -0.88
NME3-201ENST00000219302 MRPL35Q9NZE8 188 aaKnown RBP9.54□□□□□ -0.88
NME3-201ENST00000219302 CEBPGP53567 150 aa9.53□□□□□ -0.88
NME3-201ENST00000219302 OR10D4PQ8NGN7 298 aa9.53□□□□□ -0.88
NME3-201ENST00000219302 F8WDY8 70 aa9.52□□□□□ -0.89
NME3-201ENST00000219302 RIGQ13278 110 aa9.52□□□□□ -0.89
NME3-201ENST00000219302 SMIM7Q9BQ49 75 aa9.52□□□□□ -0.89
NME3-201ENST00000219302 V9GYV3 84 aa9.52□□□□□ -0.89
NME3-201ENST00000219302 IGHV3OR16-9A0A0B4J2B5 98 aa9.51□□□□□ -0.89
NME3-201ENST00000219302 FAM168BA1KXE4 195 aa9.51□□□□□ -0.89
NME3-201ENST00000219302 H0Y9J4 135 aa9.51□□□□□ -0.89
NME3-201ENST00000219302 TLX1NBP0CAT3 122 aa9.51□□□□□ -0.89
NME3-201ENST00000219302 C10orf25Q5T742 122 aa9.51□□□□□ -0.89
NME3-201ENST00000219302 ALKAL2Q6UX46 152 aa9.51□□□□□ -0.89
NME3-201ENST00000219302 KRTAP7-1Q8IUC3 87 aa9.51□□□□□ -0.89
NME3-201ENST00000219302 MUC2Q02817 5179 aa9.5□□□□□ -0.89
NME3-201ENST00000219302 A0A087WZ39 114 aa9.5□□□□□ -0.89
NME3-201ENST00000219302 PPP1R2P9O14990 202 aa9.5□□□□□ -0.89
NME3-201ENST00000219302 KRTAP1-4P0C5Y4 121 aa9.5□□□□□ -0.89
NME3-201ENST00000219302 MRPL51Q4U2R6 128 aaKnown RBP9.5□□□□□ -0.89
NME3-201ENST00000219302 TMEM18Q96B42 140 aa9.5□□□□□ -0.89
NME3-201ENST00000219302 IMMP2LQ96T52 175 aa9.5□□□□□ -0.89
NME3-201ENST00000219302 TRBV24-1A0A075B6N3 115 aa9.49□□□□□ -0.89
NME3-201ENST00000219302 ZNF727A8MUV8 499 aa9.49□□□□□ -0.89
NME3-201ENST00000219302 RPL39P62891 51 aaKnown RBP9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms