RNA–Protein interactions for RNA: ENST00000199706.12

MRPL28-201, Transcript of mitochondrial ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL28, Length 1,098 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-201ENST00000199706 NPYP01303 97 aa11.4□□□□□ -0.58
MRPL28-201ENST00000199706 TMEM18Q96B42 140 aa11.4□□□□□ -0.58
MRPL28-201ENST00000199706 TIMM21Q9BVV7 248 aa11.4□□□□□ -0.58
MRPL28-201ENST00000199706 RHEBQ15382 184 aa11.39□□□□□ -0.59
MRPL28-201ENST00000199706 TMEM136Q6ZRR5 245 aa11.39□□□□□ -0.59
MRPL28-201ENST00000199706 PRELID3AQ96N28 172 aa11.39□□□□□ -0.59
MRPL28-201ENST00000199706 IGLV10-54A0A075B6I4 117 aa11.38□□□□□ -0.59
MRPL28-201ENST00000199706 DGAT2L7PQ6IED9 249 aa11.38□□□□□ -0.59
MRPL28-201ENST00000199706 Q6ZSA8 131 aa11.38□□□□□ -0.59
MRPL28-201ENST00000199706 CDC42SE2Q9NRR3 84 aa11.38□□□□□ -0.59
MRPL28-201ENST00000199706 PCLOQ9Y6V0 5065 aa11.38□□□□□ -0.59
MRPL28-201ENST00000199706 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.37□□□□□ -0.59
MRPL28-201ENST00000199706 CCL25O15444 150 aa11.37□□□□□ -0.59
MRPL28-201ENST00000199706 ZNF664Q8N3J9 261 aa11.37□□□□□ -0.59
MRPL28-201ENST00000199706 UBE2D4Q9Y2X8 147 aa11.37□□□□□ -0.59
MRPL28-201ENST00000199706 S100PP25815 95 aa11.36□□□□□ -0.59
MRPL28-201ENST00000199706 XGP55808 180 aa11.36□□□□□ -0.59
MRPL28-201ENST00000199706 Q8N1X5 172 aa11.36□□□□□ -0.59
MRPL28-201ENST00000199706 DNAH8Q96JB1 4490 aa11.36□□□□□ -0.59
MRPL28-201ENST00000199706 K7EMI3 77 aa11.35□□□□□ -0.59
MRPL28-201ENST00000199706 PRSS1P07477 247 aa11.35□□□□□ -0.59
MRPL28-201ENST00000199706 COX19Q49B96 90 aa11.35□□□□□ -0.59
MRPL28-201ENST00000199706 CHCHD10Q8WYQ3 142 aaPredicted RBP11.35□□□□□ -0.59
MRPL28-201ENST00000199706 CNBPP62633 177 aaKnown RBP11.34□□□□□ -0.59
MRPL28-201ENST00000199706 CFAP161Q6P656 301 aa11.34□□□□□ -0.59
MRPL28-201ENST00000199706 MAP1LC3AQ9H492 121 aa11.34□□□□□ -0.59
MRPL28-201ENST00000199706 SPANXA1Q9NS26 97 aa11.34□□□□□ -0.59
MRPL28-201ENST00000199706 LINC00959A0A1B0GUT2 108 aa11.33□□□□□ -0.6
MRPL28-201ENST00000199706 GAGE12HA6NDE8 117 aa11.33□□□□□ -0.6
MRPL28-201ENST00000199706 RAB5AP20339 215 aa11.32□□□□□ -0.6
MRPL28-201ENST00000199706 MRPS36P82909 103 aaKnown RBP11.32□□□□□ -0.6
MRPL28-201ENST00000199706 SS18Q15532 418 aa11.32□□□□□ -0.6
MRPL28-201ENST00000199706 NDUFA5Q16718 116 aa11.32□□□□□ -0.6
MRPL28-201ENST00000199706 GNB1LQ9BYB4 327 aa11.32□□□□□ -0.6
MRPL28-201ENST00000199706 IGKV3OR2-268A0A0C4DH90 116 aa11.31□□□□□ -0.6
MRPL28-201ENST00000199706 MT-ND6P03923 174 aa11.31□□□□□ -0.6
MRPL28-201ENST00000199706 FOXI1Q12951 378 aa11.31□□□□□ -0.6
MRPL28-201ENST00000199706 CD164L2Q6UWJ8 174 aa11.31□□□□□ -0.6
MRPL28-201ENST00000199706 Q8N8P6 123 aa11.31□□□□□ -0.6
MRPL28-201ENST00000199706 C9orf163Q8N9P6 203 aa11.31□□□□□ -0.6
MRPL28-201ENST00000199706 GVQW2A0A096LPI5 108 aaPredicted RBP11.3□□□□□ -0.6
MRPL28-201ENST00000199706 C1orf196B1AJZ1 125 aa11.3□□□□□ -0.6
MRPL28-201ENST00000199706 SVBPQ8N300 66 aa11.3□□□□□ -0.6
MRPL28-201ENST00000199706 C15orf56Q8N910 161 aa11.3□□□□□ -0.6
MRPL28-201ENST00000199706 NXT2Q9NPJ8 142 aaKnown RBP11.3□□□□□ -0.6
MRPL28-201ENST00000199706 PYGO1Q9Y3Y4 419 aa11.3□□□□□ -0.6
MRPL28-201ENST00000199706 ABCA13Q86UQ4 5058 aa11.3□□□□□ -0.6
MRPL28-201ENST00000199706 hDV102S1A0JD36 115 aa11.29□□□□□ -0.6
MRPL28-201ENST00000199706 RPS10P5Q9NQ39 176 aa11.29□□□□□ -0.6
MRPL28-201ENST00000199706 AP5S1Q9NUS5 200 aa11.29□□□□□ -0.6
MRPL28-201ENST00000199706 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.28□□□□□ -0.6
MRPL28-201ENST00000199706 SNAPINO95295 136 aa11.28□□□□□ -0.6
MRPL28-201ENST00000199706 NPSP0C0P6 89 aa11.28□□□□□ -0.6
MRPL28-201ENST00000199706 XCL1P47992 114 aa11.28□□□□□ -0.6
MRPL28-201ENST00000199706 RPL39P62891 51 aaKnown RBP11.28□□□□□ -0.6
MRPL28-201ENST00000199706 Q6ZUT4 128 aa11.28□□□□□ -0.6
MRPL28-201ENST00000199706 FAM30AQ9NZY2 134 aa11.28□□□□□ -0.6
MRPL28-201ENST00000199706 ORMDL2Q53FV1 153 aa11.27□□□□□ -0.61
MRPL28-201ENST00000199706 FAM104AQ969W3 186 aa11.27□□□□□ -0.61
MRPL28-201ENST00000199706 KRTAP17-1Q9BYP8 105 aa11.27□□□□□ -0.61
MRPL28-201ENST00000199706 IGHV1-58A0A0C4DH39 117 aa11.26□□□□□ -0.61
MRPL28-201ENST00000199706 APOC3P02656 99 aa11.26□□□□□ -0.61
MRPL28-201ENST00000199706 G0S2P27469 103 aa11.26□□□□□ -0.61
MRPL28-201ENST00000199706 IFI27P40305 119 aaPredicted RBP11.26□□□□□ -0.61
MRPL28-201ENST00000199706 CYSLTR1Q9Y271 337 aa11.25□□□□□ -0.61
MRPL28-201ENST00000199706 VPS13BQ7Z7G8 4022 aa11.24□□□□□ -0.61
MRPL28-201ENST00000199706 LOC389332A0A1B0GUA5 103 aa11.24□□□□□ -0.61
MRPL28-201ENST00000199706 LINC01620Q4KN68 170 aa11.24□□□□□ -0.61
MRPL28-201ENST00000199706 CHAC1Q9BUX1 264 aa11.24□□□□□ -0.61
MRPL28-201ENST00000199706 FAT1Q14517 4588 aa11.24□□□□□ -0.61
MRPL28-201ENST00000199706 EPM2AB3EWF7 344 aa11.23□□□□□ -0.61
MRPL28-201ENST00000199706 SLPIP03973 132 aa11.23□□□□□ -0.61
MRPL28-201ENST00000199706 KRTAP4-5Q9BYR2 181 aa11.23□□□□□ -0.61
MRPL28-201ENST00000199706 IGHV3-64A0A075B6Q5 118 aa11.22□□□□□ -0.61
MRPL28-201ENST00000199706 TRAV13-1A0A0B4J241 112 aa11.22□□□□□ -0.61
MRPL28-201ENST00000199706 LINC01546A6NGU7 62 aa11.22□□□□□ -0.61
MRPL28-201ENST00000199706 LINC01549A6NIU2 74 aa11.22□□□□□ -0.61
MRPL28-201ENST00000199706 COX7A2LO14548 114 aa11.22□□□□□ -0.61
MRPL28-201ENST00000199706 SDIM1Q6ZPB5 146 aa11.22□□□□□ -0.61
MRPL28-201ENST00000199706 SCXQ7RTU7 201 aa11.22□□□□□ -0.61
MRPL28-201ENST00000199706 ALKBH7Q9BT30 221 aaPredicted RBP11.22□□□□□ -0.61
MRPL28-201ENST00000199706 IGLV4-3A0A075B6K6 122 aa11.21□□□□□ -0.61
MRPL28-201ENST00000199706 CIRBPQ14011 172 aaKnown RBP11.21□□□□□ -0.61
MRPL28-201ENST00000199706 RNASE13Q5GAN3 156 aaKnown RBP11.21□□□□□ -0.61
MRPL28-201ENST00000199706 C2orf66Q6UXQ4 117 aa11.21□□□□□ -0.61
MRPL28-201ENST00000199706 TMEM141Q96I45 108 aa11.21□□□□□ -0.61
MRPL28-201ENST00000199706 PKIGQ9Y2B9 76 aa11.21□□□□□ -0.61
MRPL28-201ENST00000199706 SRRM2Q9UQ35 2752 aaKnown RBP11.2□□□□□ -0.62
MRPL28-201ENST00000199706 IFITM10A6NMD0 228 aa11.2□□□□□ -0.62
MRPL28-201ENST00000199706 KIAA1644Q3SXP7 199 aa11.2□□□□□ -0.62
MRPL28-201ENST00000199706 MRPL18Q9H0U6 180 aaKnown RBP11.2□□□□□ -0.62
MRPL28-201ENST00000199706 IGHV3OR16-9A0A0B4J2B5 98 aa11.19□□□□□ -0.62
MRPL28-201ENST00000199706 IGIPA6NJ69 53 aa11.19□□□□□ -0.62
MRPL28-201ENST00000199706 HIGD2BQ4VC39 106 aa11.19□□□□□ -0.62
MRPL28-201ENST00000199706 PAPPA-AS1Q5QFB9 102 aa11.19□□□□□ -0.62
MRPL28-201ENST00000199706 Q5VSD8 79 aa11.19□□□□□ -0.62
MRPL28-201ENST00000199706 FAM229AH3BQW9 127 aa11.18□□□□□ -0.62
MRPL28-201ENST00000199706 APOMO95445 188 aa11.18□□□□□ -0.62
MRPL28-201ENST00000199706 MALP21145 153 aa11.18□□□□□ -0.62
MRPL28-201ENST00000199706 Q6ZN92 141 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms