RNA–Protein interactions for RNA: ENST00000027335.7

CDH17-201, Transcript of cadherin 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH17, Length 3,693 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17-201ENST00000027335 DPH3Q96FX2 82 aa3.71□□□□□ -1.82
CDH17-201ENST00000027335 AKAP9Q99996 3911 aa3.7□□□□□ -1.82
CDH17-201ENST00000027335 H3BUA1 57 aa3.7□□□□□ -1.82
CDH17-201ENST00000027335 FSTL3O95633 263 aa3.7□□□□□ -1.82
CDH17-201ENST00000027335 RPL39P62891 51 aaKnown RBP3.7□□□□□ -1.82
CDH17-201ENST00000027335 GAGE13Q4V321 117 aa3.7□□□□□ -1.82
CDH17-201ENST00000027335 C9orf47Q6ZRZ4 202 aa3.7□□□□□ -1.82
CDH17-201ENST00000027335 LINC00526Q96FQ7 95 aa3.7□□□□□ -1.82
CDH17-201ENST00000027335 C11orf68Q9H3H3 251 aaKnown RBP3.7□□□□□ -1.82
CDH17-201ENST00000027335 F8VRH5 84 aa3.7□□□□□ -1.82
CDH17-201ENST00000027335 COX6CP09669 75 aa3.7□□□□□ -1.82
CDH17-201ENST00000027335 DAZ2Q13117 558 aaKnown RBP3.7□□□□□ -1.82
CDH17-201ENST00000027335 DAZ4Q86SG3 579 aaKnown RBP3.7□□□□□ -1.82
CDH17-201ENST00000027335 TMEM61Q8N0U2 210 aa3.7□□□□□ -1.82
CDH17-201ENST00000027335 LINC00482Q8N8I6 264 aa3.7□□□□□ -1.82
CDH17-201ENST00000027335 DAZ3Q9NR90 486 aaKnown RBP3.7□□□□□ -1.82
CDH17-201ENST00000027335 A8MWV9 139 aa3.69□□□□□ -1.82
CDH17-201ENST00000027335 RPL36AP83881 106 aaKnown RBP3.69□□□□□ -1.82
CDH17-201ENST00000027335 LINC01545Q5VT33 79 aa3.69□□□□□ -1.82
CDH17-201ENST00000027335 RPL36ALQ969Q0 106 aaKnown RBP3.69□□□□□ -1.82
CDH17-201ENST00000027335 C11orf21Q9P2W6 132 aa3.69□□□□□ -1.82
CDH17-201ENST00000027335 F8W735 103 aaPredicted RBP3.69□□□□□ -1.82
CDH17-201ENST00000027335 PRM2P04554 102 aa3.69□□□□□ -1.82
CDH17-201ENST00000027335 RNASE1P07998 156 aaKnown RBP3.69□□□□□ -1.82
CDH17-201ENST00000027335 WFDC2Q14508 124 aa3.69□□□□□ -1.82
CDH17-201ENST00000027335 LENEPQ9Y5L5 61 aa3.69□□□□□ -1.82
CDH17-201ENST00000027335 A0A096LPF7 62 aa3.69□□□□□ -1.82
CDH17-201ENST00000027335 TRAV8-2A0A0B4J237 113 aa3.69□□□□□ -1.82
CDH17-201ENST00000027335 GYPEP15421 78 aa3.69□□□□□ -1.82
CDH17-201ENST00000027335 SUMO4Q6EEV6 95 aa3.69□□□□□ -1.82
CDH17-201ENST00000027335 AMTNQ6UX39 209 aa3.69□□□□□ -1.82
CDH17-201ENST00000027335 SH2D6Q7Z4S9 175 aa3.69□□□□□ -1.82
CDH17-201ENST00000027335 ATP5G1P05496 136 aa3.68□□□□□ -1.82
CDH17-201ENST00000027335 PRR9Q5T870 116 aa3.68□□□□□ -1.82
CDH17-201ENST00000027335 GPHB5Q86YW7 130 aa3.68□□□□□ -1.82
CDH17-201ENST00000027335 PPDPFLQ8WWR9 84 aa3.68□□□□□ -1.82
CDH17-201ENST00000027335 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.68□□□□□ -1.82
CDH17-201ENST00000027335 IGKV2-29A2NJV5 120 aaPredicted RBP3.68□□□□□ -1.82
CDH17-201ENST00000027335 HLA-DRB4P13762 266 aa3.68□□□□□ -1.82
CDH17-201ENST00000027335 DLX4Q92988 240 aaPredicted RBP3.68□□□□□ -1.82
CDH17-201ENST00000027335 OPRPNQ99935 248 aaPredicted RBP3.68□□□□□ -1.82
CDH17-201ENST00000027335 HLA-DRB4X5D2U9 266 aa3.68□□□□□ -1.82
CDH17-201ENST00000027335 TRBV25-1A0A075B6N4 114 aa3.68□□□□□ -1.82
CDH17-201ENST00000027335 TRBV6-1A0A0K0K1D8 114 aa3.68□□□□□ -1.82
CDH17-201ENST00000027335 CLPSL1A2RUU4 121 aa3.68□□□□□ -1.82
CDH17-201ENST00000027335 I3L3M4 83 aa3.68□□□□□ -1.82
CDH17-201ENST00000027335 C18orf65Q6ZTR6 163 aa3.68□□□□□ -1.82
CDH17-201ENST00000027335 COX8CQ7Z4L0 72 aa3.68□□□□□ -1.82
CDH17-201ENST00000027335 SPATA12Q7Z6I5 190 aa3.68□□□□□ -1.82
CDH17-201ENST00000027335 Q8N976 141 aa3.68□□□□□ -1.82
CDH17-201ENST00000027335 SVEP1Q4LDE5 3571 aa3.67□□□□□ -1.82
CDH17-201ENST00000027335 LINC01549A6NIU2 74 aa3.67□□□□□ -1.82
CDH17-201ENST00000027335 P0DMU3 169 aa3.67□□□□□ -1.82
CDH17-201ENST00000027335 FAM231AP0DMU4 169 aa3.67□□□□□ -1.82
CDH17-201ENST00000027335 FAM231CP0DMU5 169 aa3.67□□□□□ -1.82
CDH17-201ENST00000027335 ZNF493Q6ZR52 646 aa3.67□□□□□ -1.82
CDH17-201ENST00000027335 TIMM21Q9BVV7 248 aa3.67□□□□□ -1.82
CDH17-201ENST00000027335 NOP10Q9NPE3 64 aaKnown RBP3.67□□□□□ -1.82
CDH17-201ENST00000027335 SCRT2Q9NQ03 307 aa3.67□□□□□ -1.82
CDH17-201ENST00000027335 TRAV8-4A0A0B4J246 113 aa3.67□□□□□ -1.82
CDH17-201ENST00000027335 A0A0J9YX75 114 aa3.67□□□□□ -1.82
CDH17-201ENST00000027335 MYMXA0A1B0GTQ4 84 aa3.67□□□□□ -1.82
CDH17-201ENST00000027335 MRPS12O15235 138 aaKnown RBP3.67□□□□□ -1.82
CDH17-201ENST00000027335 ZFAND2AQ8N6M9 145 aa3.67□□□□□ -1.82
CDH17-201ENST00000027335 COPS9Q8WXC6 57 aa3.67□□□□□ -1.82
CDH17-201ENST00000027335 A0A0J9YXV3 536 aa3.67□□□□□ -1.82
CDH17-201ENST00000027335 PLAC8L1A1L4L8 177 aa3.67□□□□□ -1.82
CDH17-201ENST00000027335 H3BMG7 143 aa3.67□□□□□ -1.82
CDH17-201ENST00000027335 CEMP1Q6PRD7 247 aaPredicted RBP3.67□□□□□ -1.82
CDH17-201ENST00000027335 ZFP2Q6ZN57 461 aa3.67□□□□□ -1.82
CDH17-201ENST00000027335 URB1-AS1Q96HZ7 61 aa3.67□□□□□ -1.82
CDH17-201ENST00000027335 BSNQ9UPA5 3926 aa3.67□□□□□ -1.82
CDH17-201ENST00000027335 FXYD2P54710 66 aa3.66□□□□□ -1.82
CDH17-201ENST00000027335 ESM1Q9NQ30 184 aa3.66□□□□□ -1.82
CDH17-201ENST00000027335 J3QL48 77 aa3.66□□□□□ -1.82
CDH17-201ENST00000027335 M0R2P5 195 aa3.66□□□□□ -1.82
CDH17-201ENST00000027335 PAX4O43316 350 aa3.66□□□□□ -1.82
CDH17-201ENST00000027335 LINC00158P58513 81 aa3.66□□□□□ -1.82
CDH17-201ENST00000027335 BEAN1Q3B7T3 259 aa3.66□□□□□ -1.82
CDH17-201ENST00000027335 RNF185Q96GF1 192 aa3.66□□□□□ -1.82
CDH17-201ENST00000027335 APCP25054 2843 aa3.66□□□□□ -1.82
CDH17-201ENST00000027335 PSMB8P28062 276 aa3.66□□□□□ -1.82
CDH17-201ENST00000027335 CLPSL2Q6UWE3 100 aa3.66□□□□□ -1.82
CDH17-201ENST00000027335 IGKV2D-26A0A0A0MRZ7 120 aa3.65□□□□□ -1.82
CDH17-201ENST00000027335 DNAJC9-AS1A6NH13 148 aa3.65□□□□□ -1.82
CDH17-201ENST00000027335 INAFM1C9JVW0 142 aa3.65□□□□□ -1.82
CDH17-201ENST00000027335 CRYGAP11844 174 aa3.65□□□□□ -1.82
CDH17-201ENST00000027335 CELSR1Q9NYQ6 3014 aa3.65□□□□□ -1.82
CDH17-201ENST00000027335 CSMD1Q96PZ7 3565 aa3.65□□□□□ -1.83
CDH17-201ENST00000027335 DNHD1Q96M86 4753 aa3.65□□□□□ -1.83
CDH17-201ENST00000027335 C11orf86A6NJI1 115 aa3.65□□□□□ -1.83
CDH17-201ENST00000027335 K7EQG2 157 aa3.65□□□□□ -1.83
CDH17-201ENST00000027335 DEFB4AO15263 64 aa3.65□□□□□ -1.83
CDH17-201ENST00000027335 INSL3P51460 131 aa3.65□□□□□ -1.83
CDH17-201ENST00000027335 PROK1P58294 105 aa3.65□□□□□ -1.83
CDH17-201ENST00000027335 CEND1Q8N111 149 aa3.65□□□□□ -1.83
CDH17-201ENST00000027335 TMEM141Q96I45 108 aa3.65□□□□□ -1.83
CDH17-201ENST00000027335 RBM12B-AS1Q9P1G2 102 aa3.65□□□□□ -1.83
CDH17-201ENST00000027335 KLK5Q9Y337 293 aaPredicted RBP3.65□□□□□ -1.83
CDH17-201ENST00000027335 Q6YL49 198 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms