RNA–Protein interactions for RNA: ENST00000641339.1

RGPD1-205, Transcript of RANBP2-like and GRIP domain containing 1, humanhuman

Gene RGPD1, Length 562 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD1-205ENST00000641339 HDAC1Q13547 482 aaPredicted RBP20.11■□□□□ 0.81
RGPD1-205ENST00000641339 AAMPQ13685 434 aa20.11■□□□□ 0.81
RGPD1-205ENST00000641339 VGLL4Q14135 290 aa20.11■□□□□ 0.81
RGPD1-205ENST00000641339 MAGEB6Q8N7X4 407 aa20.11■□□□□ 0.81
RGPD1-205ENST00000641339 EXOC6Q8TAG9 804 aa20.11■□□□□ 0.81
RGPD1-205ENST00000641339 RNF186Q9NXI6 227 aa20.11■□□□□ 0.81
RGPD1-205ENST00000641339 ZNF112Q9UJU3 913 aa20.11■□□□□ 0.81
RGPD1-205ENST00000641339 GOLIM4O00461 696 aa20.1■□□□□ 0.81
RGPD1-205ENST00000641339 CA12O43570 354 aa20.1■□□□□ 0.81
RGPD1-205ENST00000641339 BAG3O95817 575 aa20.1■□□□□ 0.81
RGPD1-205ENST00000641339 SLURP2P0DP57 97 aa20.1■□□□□ 0.81
RGPD1-205ENST00000641339 ZBTB48P10074 688 aaPredicted RBP20.1■□□□□ 0.81
RGPD1-205ENST00000641339 CYP7A1P22680 504 aa20.1■□□□□ 0.81
RGPD1-205ENST00000641339 MAP3K12Q12852 859 aa20.1■□□□□ 0.81
RGPD1-205ENST00000641339 TTF1Q15361 905 aaPredicted RBP20.1■□□□□ 0.81
RGPD1-205ENST00000641339 DCAF15Q66K64 600 aa20.1■□□□□ 0.81
RGPD1-205ENST00000641339 ZKSCAN4Q969J2 545 aaPredicted RBP20.1■□□□□ 0.81
RGPD1-205ENST00000641339 WRNIP1Q96S55 665 aa20.1■□□□□ 0.81
RGPD1-205ENST00000641339 DNAJC2Q99543 621 aaKnown RBP20.1■□□□□ 0.81
RGPD1-205ENST00000641339 HAUS7Q99871 368 aa20.1■□□□□ 0.81
RGPD1-205ENST00000641339 ZNF341Q9BYN7 854 aa20.1■□□□□ 0.81
RGPD1-205ENST00000641339 ELP3Q9H9T3 547 aa20.1■□□□□ 0.81
RGPD1-205ENST00000641339 DYNLL1P63167 89 aaKnown RBP20.09■□□□□ 0.81
RGPD1-205ENST00000641339 TEX11Q8IYF3 940 aa20.09■□□□□ 0.81
RGPD1-205ENST00000641339 CNKSR2Q8WXI2 1034 aa20.09■□□□□ 0.81
RGPD1-205ENST00000641339 SNCAIPQ9Y6H5 919 aa20.09■□□□□ 0.81
RGPD1-205ENST00000641339 MYO5AQ9Y4I1 1855 aaKnown RBP20.08■□□□□ 0.81
RGPD1-205ENST00000641339 PHF20L1A8MW92 1017 aa20.08■□□□□ 0.81
RGPD1-205ENST00000641339 INPP5BP32019 993 aa20.08■□□□□ 0.81
RGPD1-205ENST00000641339 TMED8Q6PL24 325 aaPredicted RBP20.08■□□□□ 0.81
RGPD1-205ENST00000641339 OPTNQ96CV9 577 aa20.08■□□□□ 0.81
RGPD1-205ENST00000641339 ABHD8Q96I13 439 aa20.08■□□□□ 0.81
RGPD1-205ENST00000641339 NOL10Q9BSC4 688 aaKnown RBP20.08■□□□□ 0.81
RGPD1-205ENST00000641339 OSBPL5Q9H0X9 879 aaPredicted RBP20.08■□□□□ 0.81
RGPD1-205ENST00000641339 ECHDC1Q9NTX5 307 aa20.08■□□□□ 0.81
RGPD1-205ENST00000641339 PAG1Q9NWQ8 432 aa20.08■□□□□ 0.81
RGPD1-205ENST00000641339 SAGE1Q9NXZ1 904 aa20.08■□□□□ 0.81
RGPD1-205ENST00000641339 TCRBV5S4A2TA0A5A2 114 aa20.07■□□□□ 0.8
RGPD1-205ENST00000641339 TRPA1O75762 1119 aa20.07■□□□□ 0.8
RGPD1-205ENST00000641339 PLCG2P16885 1265 aa20.07■□□□□ 0.8
RGPD1-205ENST00000641339 SLC9C2Q5TAH2 1124 aa20.07■□□□□ 0.8
RGPD1-205ENST00000641339 ZSCAN29Q8IWY8 852 aaPredicted RBP20.07■□□□□ 0.8
RGPD1-205ENST00000641339 TGFBRAP1Q8WUH2 860 aa20.07■□□□□ 0.8
RGPD1-205ENST00000641339 CSADQ9Y600 493 aa20.07■□□□□ 0.8
RGPD1-205ENST00000641339 PDE6AP16499 860 aa20.06■□□□□ 0.8
RGPD1-205ENST00000641339 MIGA1Q8NAN2 632 aa20.06■□□□□ 0.8
RGPD1-205ENST00000641339 MS4A4AQ96JQ5 239 aa20.06■□□□□ 0.8
RGPD1-205ENST00000641339 MAST2Q6P0Q8 1798 aa20.06■□□□□ 0.8
RGPD1-205ENST00000641339 OTOFQ9HC10 1997 aa20.05■□□□□ 0.8
RGPD1-205ENST00000641339 TESPA1A2RU30 521 aaPredicted RBP20.05■□□□□ 0.8
RGPD1-205ENST00000641339 MANSC4A6NHS7 340 aaPredicted RBP20.05■□□□□ 0.8
RGPD1-205ENST00000641339 SPDYE5A6NIY4 337 aa20.05■□□□□ 0.8
RGPD1-205ENST00000641339 TBC1D12O60347 775 aa20.05■□□□□ 0.8
RGPD1-205ENST00000641339 INHBEP58166 350 aa20.05■□□□□ 0.8
RGPD1-205ENST00000641339 SREBF2Q12772 1141 aa20.05■□□□□ 0.8
RGPD1-205ENST00000641339 TSHZ3Q63HK5 1081 aa20.05■□□□□ 0.8
RGPD1-205ENST00000641339 OTUD7AQ8TE49 926 aaPredicted RBP20.05■□□□□ 0.8
RGPD1-205ENST00000641339 GCC1Q96CN9 775 aa20.05■□□□□ 0.8
RGPD1-205ENST00000641339 RIOK1Q9BRS2 568 aaKnown RBP20.05■□□□□ 0.8
RGPD1-205ENST00000641339 FLT1P17948 1338 aa20.04■□□□□ 0.8
RGPD1-205ENST00000641339 DOCK2Q92608 1830 aa20.04■□□□□ 0.8
RGPD1-205ENST00000641339 IGHDP01880 384 aa20.04■□□□□ 0.8
RGPD1-205ENST00000641339 SLFNL1Q499Z3 407 aa20.04■□□□□ 0.8
RGPD1-205ENST00000641339 NOL9Q5SY16 702 aaKnown RBP20.04■□□□□ 0.8
RGPD1-205ENST00000641339 MAPKAPK5Q8IW41 473 aa20.04■□□□□ 0.8
RGPD1-205ENST00000641339 PTPN18Q99952 460 aa20.04■□□□□ 0.8
RGPD1-205ENST00000641339 COL2A1P02458 1487 aaPredicted RBP20.04■□□□□ 0.8
RGPD1-205ENST00000641339 SALL3Q9BXA9 1300 aa20.03■□□□□ 0.8
RGPD1-205ENST00000641339 ZNF532Q9HCE3 1301 aa20.03■□□□□ 0.8
RGPD1-205ENST00000641339 CHGBP05060 677 aa20.03■□□□□ 0.8
RGPD1-205ENST00000641339 ANKRD45Q5TZF3 282 aa20.03■□□□□ 0.8
RGPD1-205ENST00000641339 ERO1BQ86YB8 467 aa20.03■□□□□ 0.8
RGPD1-205ENST00000641339 IFNL1Q8IU54 200 aa20.03■□□□□ 0.8
RGPD1-205ENST00000641339 OTUD5Q96G74 571 aa20.03■□□□□ 0.8
RGPD1-205ENST00000641339 IGF2BP3O00425 579 aaKnown RBP eCLIP20.02■□□□□ 0.8
RGPD1-205ENST00000641339 ADD2P35612 726 aa20.02■□□□□ 0.8
RGPD1-205ENST00000641339 CERS3Q8IU89 383 aa20.02■□□□□ 0.8
RGPD1-205ENST00000641339 DHX36Q9H2U1 1008 aaKnown RBP20.02■□□□□ 0.8
RGPD1-205ENST00000641339 MAGEB6P1A0A0J9YX57 407 aa20.01■□□□□ 0.79
RGPD1-205ENST00000641339 FAM196BA6NMK8 535 aa20.01■□□□□ 0.79
RGPD1-205ENST00000641339 IRF6O14896 467 aa20.01■□□□□ 0.79
RGPD1-205ENST00000641339 TBC1D8O95759 1140 aa20.01■□□□□ 0.79
RGPD1-205ENST00000641339 PPATQ06203 517 aa20.01■□□□□ 0.79
RGPD1-205ENST00000641339 METTL16Q86W50 562 aaKnown RBP20.01■□□□□ 0.79
RGPD1-205ENST00000641339 SMC5Q8IY18 1101 aa20.01■□□□□ 0.79
RGPD1-205ENST00000641339 PI4K2BQ8TCG2 481 aa20.01■□□□□ 0.79
RGPD1-205ENST00000641339 GPATCH3Q96I76 525 aa20.01■□□□□ 0.79
RGPD1-205ENST00000641339 R3HDMLQ9H3Y0 253 aa20.01■□□□□ 0.79
RGPD1-205ENST00000641339 RWDD1Q9H446 243 aaPredicted RBP20.01■□□□□ 0.79
RGPD1-205ENST00000641339 PI4KBQ9UBF8 816 aa20.01■□□□□ 0.79
RGPD1-205ENST00000641339 PALD1Q9ULE6 856 aa20.01■□□□□ 0.79
RGPD1-205ENST00000641339 TTC41PQ6P2S7 1318 aa20.01■□□□□ 0.79
RGPD1-205ENST00000641339 CCDC85CA6NKD9 419 aa20■□□□□ 0.79
RGPD1-205ENST00000641339 GTF2A2P52657 109 aa20■□□□□ 0.79
RGPD1-205ENST00000641339 IRX6P78412 446 aaPredicted RBP20■□□□□ 0.79
RGPD1-205ENST00000641339 PPIL2Q13356 520 aa20■□□□□ 0.79
RGPD1-205ENST00000641339 RRP1BQ14684 758 aaKnown RBP20■□□□□ 0.79
RGPD1-205ENST00000641339 BRI3BPQ8WY22 251 aa20■□□□□ 0.79
RGPD1-205ENST00000641339 CFHR5Q9BXR6 569 aa20■□□□□ 0.79
RGPD1-205ENST00000641339 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms