RNA–Protein interactions for RNA: ENST00000639290.1

CCDC7-213, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,542 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-213ENST00000639290 ABCC4O15439 1325 aa4.86□□□□□ -1.63
CCDC7-213ENST00000639290 ARAP2Q8WZ64 1704 aa4.86□□□□□ -1.63
CCDC7-213ENST00000639290 AVPR2P30518 371 aa4.86□□□□□ -1.63
CCDC7-213ENST00000639290 ZP2Q05996 745 aa4.86□□□□□ -1.63
CCDC7-213ENST00000639290 ZNF530Q6P9A1 599 aaPredicted RBP4.86□□□□□ -1.63
CCDC7-213ENST00000639290 ERO1BQ86YB8 467 aa4.86□□□□□ -1.63
CCDC7-213ENST00000639290 OGFOD1Q8N543 542 aa4.86□□□□□ -1.63
CCDC7-213ENST00000639290 TACC3Q9Y6A5 838 aa4.86□□□□□ -1.63
CCDC7-213ENST00000639290 KIF20BQ96Q89 1820 aa4.86□□□□□ -1.63
CCDC7-213ENST00000639290 ZFHX4Q86UP3 3567 aa4.86□□□□□ -1.63
CCDC7-213ENST00000639290 FASNP49327 2511 aaKnown RBP4.86□□□□□ -1.63
CCDC7-213ENST00000639290 USP24Q9UPU5 2620 aa4.86□□□□□ -1.63
CCDC7-213ENST00000639290 WNT10BO00744 389 aa4.86□□□□□ -1.63
CCDC7-213ENST00000639290 TNPO2O14787 897 aaKnown RBP4.86□□□□□ -1.63
CCDC7-213ENST00000639290 PPIGQ13427 754 aaKnown RBP eCLIP4.86□□□□□ -1.63
CCDC7-213ENST00000639290 C3orf67Q6ZVT6 689 aa4.86□□□□□ -1.63
CCDC7-213ENST00000639290 SPNS2Q8IVW8 549 aa4.86□□□□□ -1.63
CCDC7-213ENST00000639290 EYA1Q99502 592 aa4.86□□□□□ -1.63
CCDC7-213ENST00000639290 CPA4Q9UI42 421 aa4.86□□□□□ -1.63
CCDC7-213ENST00000639290 BRCA2P51587 3418 aa4.86□□□□□ -1.63
CCDC7-213ENST00000639290 SCN9AQ15858 1988 aa4.86□□□□□ -1.63
CCDC7-213ENST00000639290 XRCC5P13010 732 aaKnown RBP4.85□□□□□ -1.63
CCDC7-213ENST00000639290 SERBP1Q8NC51 408 aaKnown RBP eCLIP4.85□□□□□ -1.63
CCDC7-213ENST00000639290 UBE2ZQ9H832 354 aaPredicted RBP4.85□□□□□ -1.63
CCDC7-213ENST00000639290 CSADQ9Y600 493 aa4.85□□□□□ -1.63
CCDC7-213ENST00000639290 ZNF536O15090 1300 aa4.85□□□□□ -1.63
CCDC7-213ENST00000639290 ERVV-1B6SEH8 477 aa4.85□□□□□ -1.63
CCDC7-213ENST00000639290 MAP3K9P80192 1104 aa4.85□□□□□ -1.63
CCDC7-213ENST00000639290 GRAPQ13588 217 aa4.85□□□□□ -1.63
CCDC7-213ENST00000639290 KRTAP21-3Q3LHN1 58 aa4.85□□□□□ -1.63
CCDC7-213ENST00000639290 CCDC129Q6ZRS4 1044 aa4.85□□□□□ -1.63
CCDC7-213ENST00000639290 ZFPM1Q8IX07 1006 aa4.85□□□□□ -1.63
CCDC7-213ENST00000639290 GRAPLQ8TC17 118 aaPredicted RBP4.85□□□□□ -1.63
CCDC7-213ENST00000639290 NLRP3Q96P20 1036 aa4.85□□□□□ -1.63
CCDC7-213ENST00000639290 DEFB129Q9H1M3 183 aa4.85□□□□□ -1.63
CCDC7-213ENST00000639290 ZFHX2Q9C0A1 2572 aaPredicted RBP4.84□□□□□ -1.63
CCDC7-213ENST00000639290 G3V3G9 751 aa4.84□□□□□ -1.63
CCDC7-213ENST00000639290 PTCRAQ6ISU1 281 aaPredicted RBP4.84□□□□□ -1.63
CCDC7-213ENST00000639290 PODNQ7Z5L7 613 aa4.84□□□□□ -1.63
CCDC7-213ENST00000639290 HOOK2Q96ED9 719 aa4.84□□□□□ -1.63
CCDC7-213ENST00000639290 ELP3Q9H9T3 547 aa4.84□□□□□ -1.63
CCDC7-213ENST00000639290 RALYQ9UKM9 306 aaKnown RBP4.84□□□□□ -1.63
CCDC7-213ENST00000639290 ANGPTL2Q9UKU9 493 aa4.84□□□□□ -1.63
CCDC7-213ENST00000639290 USP17L3A6NCW0 530 aa4.84□□□□□ -1.64
CCDC7-213ENST00000639290 USP17L4A6NCW7 530 aa4.84□□□□□ -1.64
CCDC7-213ENST00000639290 NBPF26B4DH59 902 aa4.84□□□□□ -1.64
CCDC7-213ENST00000639290 PPATQ06203 517 aa4.84□□□□□ -1.64
CCDC7-213ENST00000639290 SIGLEC14Q08ET2 396 aa4.84□□□□□ -1.64
CCDC7-213ENST00000639290 USP17L1Q7RTZ2 530 aa4.84□□□□□ -1.64
CCDC7-213ENST00000639290 PDCD7Q8N8D1 485 aaKnown RBP4.84□□□□□ -1.64
CCDC7-213ENST00000639290 DBNDD1Q9H9R9 158 aa4.84□□□□□ -1.64
CCDC7-213ENST00000639290 ZNF292O60281 2723 aa4.84□□□□□ -1.64
CCDC7-213ENST00000639290 RRS1Q15050 365 aaKnown RBP4.83□□□□□ -1.64
CCDC7-213ENST00000639290 LRRC41Q15345 812 aa4.83□□□□□ -1.64
CCDC7-213ENST00000639290 RSPO4Q2I0M5 234 aaPredicted RBP4.83□□□□□ -1.64
CCDC7-213ENST00000639290 PRAMEF18Q5VWM3 479 aa4.83□□□□□ -1.64
CCDC7-213ENST00000639290 SLC39A5Q6ZMH5 540 aa4.83□□□□□ -1.64
CCDC7-213ENST00000639290 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.83□□□□□ -1.64
CCDC7-213ENST00000639290 NEK9Q8TD19 979 aa4.83□□□□□ -1.64
CCDC7-213ENST00000639290 TMEM121BQ9BXQ6 578 aaPredicted RBP4.83□□□□□ -1.64
CCDC7-213ENST00000639290 NKX2-4Q9H2Z4 354 aa4.83□□□□□ -1.64
CCDC7-213ENST00000639290 TNKSO95271 1327 aa4.83□□□□□ -1.64
CCDC7-213ENST00000639290 ANKRD11Q6UB99 2663 aaPredicted RBP4.83□□□□□ -1.64
CCDC7-213ENST00000639290 FAM186AA6NE01 2351 aa4.83□□□□□ -1.64
CCDC7-213ENST00000639290 PDHXO00330 501 aa4.83□□□□□ -1.64
CCDC7-213ENST00000639290 LMNAP02545 664 aaKnown RBP4.83□□□□□ -1.64
CCDC7-213ENST00000639290 ZXDAP98168 799 aa4.83□□□□□ -1.64
CCDC7-213ENST00000639290 TNFAIP1Q13829 316 aa4.83□□□□□ -1.64
CCDC7-213ENST00000639290 PARP10Q53GL7 1025 aa4.83□□□□□ -1.64
CCDC7-213ENST00000639290 MICALL1Q8N3F8 863 aa4.83□□□□□ -1.64
CCDC7-213ENST00000639290 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.83□□□□□ -1.64
CCDC7-213ENST00000639290 LPAR1Q92633 364 aa4.83□□□□□ -1.64
CCDC7-213ENST00000639290 CLTBP09497 229 aa4.82□□□□□ -1.64
CCDC7-213ENST00000639290 PPP2R2DQ66LE6 453 aa4.82□□□□□ -1.64
CCDC7-213ENST00000639290 PPP1R3FQ6ZSY5 799 aaPredicted RBP4.82□□□□□ -1.64
CCDC7-213ENST00000639290 FRMD5Q7Z6J6 570 aa4.82□□□□□ -1.64
CCDC7-213ENST00000639290 TTC5Q8N0Z6 440 aa4.82□□□□□ -1.64
CCDC7-213ENST00000639290 ARRDC4Q8NCT1 418 aa4.82□□□□□ -1.64
CCDC7-213ENST00000639290 SOCS4Q8WXH5 440 aa4.82□□□□□ -1.64
CCDC7-213ENST00000639290 DDX1Q92499 740 aaKnown RBP4.82□□□□□ -1.64
CCDC7-213ENST00000639290 HAUS7Q99871 368 aa4.82□□□□□ -1.64
CCDC7-213ENST00000639290 SENP6Q9GZR1 1112 aaPredicted RBP4.82□□□□□ -1.64
CCDC7-213ENST00000639290 LHX6Q9UPM6 363 aa4.82□□□□□ -1.64
CCDC7-213ENST00000639290 COL11A1P12107 1806 aaPredicted RBP4.82□□□□□ -1.64
CCDC7-213ENST00000639290 TRIM43BA6NCK2 446 aa4.82□□□□□ -1.64
CCDC7-213ENST00000639290 LMNB2Q03252 620 aa4.82□□□□□ -1.64
CCDC7-213ENST00000639290 TRIM43Q96BQ3 446 aaPredicted RBP4.82□□□□□ -1.64
CCDC7-213ENST00000639290 TOX2Q96NM4 488 aa4.82□□□□□ -1.64
CCDC7-213ENST00000639290 ZC3H12CQ9C0D7 883 aaKnown RBP4.82□□□□□ -1.64
CCDC7-213ENST00000639290 ATP11BQ9Y2G3 1177 aa4.82□□□□□ -1.64
CCDC7-213ENST00000639290 MAP1BP46821 2468 aaKnown RBP4.81□□□□□ -1.64
CCDC7-213ENST00000639290 CEMIPQ8WUJ3 1361 aa4.81□□□□□ -1.64
CCDC7-213ENST00000639290 SIPA1L3O60292 1781 aaPredicted RBP4.81□□□□□ -1.64
CCDC7-213ENST00000639290 NCK2O43639 380 aa4.81□□□□□ -1.64
CCDC7-213ENST00000639290 PMLP29590 882 aa4.81□□□□□ -1.64
CCDC7-213ENST00000639290 PBX2P40425 430 aa4.81□□□□□ -1.64
CCDC7-213ENST00000639290 ATXN1P54253 815 aaKnown RBP4.81□□□□□ -1.64
CCDC7-213ENST00000639290 EPHB4P54760 987 aa4.81□□□□□ -1.64
CCDC7-213ENST00000639290 COL19A1Q14993 1142 aa4.81□□□□□ -1.64
CCDC7-213ENST00000639290 DDX46Q7L014 1031 aaKnown RBP4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms